RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 KLK9Q2XQG4 91 aa12.67□□□□□ -0.38
SMN2-216ENST00000638794 TIMM50Q3ZCQ8 353 aa12.67□□□□□ -0.38
SMN2-216ENST00000638794 EEF1AKMT3Q96AZ1 226 aa12.67□□□□□ -0.38
SMN2-216ENST00000638794 SLC25A38Q96DW6 304 aa12.67□□□□□ -0.38
SMN2-216ENST00000638794 RNF167Q9H6Y7 350 aa12.67□□□□□ -0.38
SMN2-216ENST00000638794 BET1LQ9NYM9 111 aa12.67□□□□□ -0.38
SMN2-216ENST00000638794 KLK9Q9UKQ9 250 aa12.67□□□□□ -0.38
SMN2-216ENST00000638794 IGLV11-55A0A075B6I3 123 aa12.66□□□□□ -0.38
SMN2-216ENST00000638794 ZNF320A2RRD8 509 aa12.66□□□□□ -0.38
SMN2-216ENST00000638794 MFSD2BA6NFX1 497 aa12.66□□□□□ -0.38
SMN2-216ENST00000638794 A8MWP6 167 aa12.66□□□□□ -0.38
SMN2-216ENST00000638794 PPYP01298 95 aa12.66□□□□□ -0.38
SMN2-216ENST00000638794 HIST1H1BP16401 226 aaKnown RBP12.66□□□□□ -0.38
SMN2-216ENST00000638794 MSMO1Q15800 293 aa12.66□□□□□ -0.38
SMN2-216ENST00000638794 HOGA1Q86XE5 327 aa12.66□□□□□ -0.38
SMN2-216ENST00000638794 TMEM61Q8N0U2 210 aa12.66□□□□□ -0.38
SMN2-216ENST00000638794 SPAG16Q8N0X2 631 aa12.66□□□□□ -0.38
SMN2-216ENST00000638794 HRASLSQ9HDD0 168 aa12.66□□□□□ -0.38
SMN2-216ENST00000638794 MLXQ9UH92 298 aa12.66□□□□□ -0.38
SMN2-216ENST00000638794 ETV7Q9Y603 341 aa12.66□□□□□ -0.38
SMN2-216ENST00000638794 SULT1C2O00338 296 aa12.65□□□□□ -0.38
SMN2-216ENST00000638794 RBFOX2O43251 390 aaKnown RBP eCLIP12.65□□□□□ -0.38
SMN2-216ENST00000638794 DEFA4P12838 97 aa12.65□□□□□ -0.38
SMN2-216ENST00000638794 SCAND1P57086 179 aa12.65□□□□□ -0.38
SMN2-216ENST00000638794 OR2B8PP59922 312 aa12.65□□□□□ -0.38
SMN2-216ENST00000638794 FAM106AQ4KMX7 169 aa12.65□□□□□ -0.38
SMN2-216ENST00000638794 IDNKQ5T6J7 187 aa12.65□□□□□ -0.38
SMN2-216ENST00000638794 ZNF57Q68EA5 555 aaPredicted RBP12.65□□□□□ -0.38
SMN2-216ENST00000638794 ZNF773Q6PK81 442 aa12.65□□□□□ -0.38
SMN2-216ENST00000638794 SLC16A13Q7RTY0 426 aa12.65□□□□□ -0.38
SMN2-216ENST00000638794 OR4A5Q8NH83 315 aa12.65□□□□□ -0.38
SMN2-216ENST00000638794 IL17DQ8TAD2 202 aa12.65□□□□□ -0.38
SMN2-216ENST00000638794 TRAV3A0A0B4J244 114 aa12.64□□□□□ -0.39
SMN2-216ENST00000638794 FCER2P06734 321 aa12.64□□□□□ -0.39
SMN2-216ENST00000638794 TAS2R31P59538 309 aa12.64□□□□□ -0.39
SMN2-216ENST00000638794 FXYD4P59646 89 aa12.64□□□□□ -0.39
SMN2-216ENST00000638794 UXS1Q8NBZ7 420 aa12.64□□□□□ -0.39
SMN2-216ENST00000638794 ZBTB34Q8NCN2 500 aa12.64□□□□□ -0.39
SMN2-216ENST00000638794 CXorf58Q96LI9 332 aa12.64□□□□□ -0.39
SMN2-216ENST00000638794 AIFM2Q9BRQ8 373 aa12.64□□□□□ -0.39
SMN2-216ENST00000638794 SLC5A7Q9GZV3 580 aa12.64□□□□□ -0.39
SMN2-216ENST00000638794 A0A0A6YYH2 397 aa12.63□□□□□ -0.39
SMN2-216ENST00000638794 TRBV7-1A0A0A6YYK4 115 aa12.63□□□□□ -0.39
SMN2-216ENST00000638794 LOC100506127A0A0U1RQW1 187 aa12.63□□□□□ -0.39
SMN2-216ENST00000638794 IGLC7A0M8Q6 106 aa12.63□□□□□ -0.39
SMN2-216ENST00000638794 A6NJ64 397 aa12.63□□□□□ -0.39
SMN2-216ENST00000638794 JTBO76095 146 aa12.63□□□□□ -0.39
SMN2-216ENST00000638794 CLEC3BP05452 202 aa12.63□□□□□ -0.39
SMN2-216ENST00000638794 GPR183P32249 361 aa12.63□□□□□ -0.39
SMN2-216ENST00000638794 CATR1Q13166 79 aa12.63□□□□□ -0.39
SMN2-216ENST00000638794 POU2AF1Q16633 256 aa12.63□□□□□ -0.39
SMN2-216ENST00000638794 TM4SF20Q53R12 229 aa12.63□□□□□ -0.39
SMN2-216ENST00000638794 BTNL8Q6UX41 500 aa12.63□□□□□ -0.39
SMN2-216ENST00000638794 UNQ9165/PRO28630Q6UXU0 137 aa12.63□□□□□ -0.39
SMN2-216ENST00000638794 ZNF818PQ6ZRF7 136 aa12.63□□□□□ -0.39
SMN2-216ENST00000638794 OR52B4Q8NGK2 314 aa12.63□□□□□ -0.39
SMN2-216ENST00000638794 AUNIPQ9H7T9 357 aa12.63□□□□□ -0.39
SMN2-216ENST00000638794 UPK2O00526 184 aa12.62□□□□□ -0.39
SMN2-216ENST00000638794 SCAF4O95104 1147 aaKnown RBP12.62□□□□□ -0.39
SMN2-216ENST00000638794 HPRT1P00492 218 aa12.62□□□□□ -0.39
SMN2-216ENST00000638794 NQO2P16083 231 aa12.62□□□□□ -0.39
SMN2-216ENST00000638794 TMEM17Q86X19 198 aa12.62□□□□□ -0.39
SMN2-216ENST00000638794 OR51H1Q8NH63 302 aa12.62□□□□□ -0.39
SMN2-216ENST00000638794 ZNF502Q8TBZ5 544 aa12.62□□□□□ -0.39
SMN2-216ENST00000638794 YTHDF1Q9BYJ9 559 aaKnown RBP12.62□□□□□ -0.39
SMN2-216ENST00000638794 TMEM140Q9NV12 185 aa12.62□□□□□ -0.39
SMN2-216ENST00000638794 IGHV3-35A0A0C4DH35 117 aa12.61□□□□□ -0.39
SMN2-216ENST00000638794 MEIS3P1A6NDR6 274 aa12.61□□□□□ -0.39
SMN2-216ENST00000638794 S1PR2O95136 353 aa12.61□□□□□ -0.39
SMN2-216ENST00000638794 ATP6V1G2O95670 118 aa12.61□□□□□ -0.39
SMN2-216ENST00000638794 DMBX1Q8NFW5 382 aa12.61□□□□□ -0.39
SMN2-216ENST00000638794 COMMD5Q9GZQ3 224 aa12.61□□□□□ -0.39
SMN2-216ENST00000638794 Q9H521 79 aa12.61□□□□□ -0.39
SMN2-216ENST00000638794 DIABLOQ9NR28 239 aa12.61□□□□□ -0.39
SMN2-216ENST00000638794 C8orf88P0DMB2 117 aa12.6□□□□□ -0.39
SMN2-216ENST00000638794 RPA2P15927 270 aa12.6□□□□□ -0.39
SMN2-216ENST00000638794 ZNF585BQ52M93 769 aa12.6□□□□□ -0.39
SMN2-216ENST00000638794 AADACL3Q5VUY0 350 aa12.6□□□□□ -0.39
SMN2-216ENST00000638794 OR5AP2Q8NGF4 316 aa12.6□□□□□ -0.39
SMN2-216ENST00000638794 OR10W1Q8NGF6 305 aa12.6□□□□□ -0.39
SMN2-216ENST00000638794 GIMAP1Q8WWP7 306 aa12.6□□□□□ -0.39
SMN2-216ENST00000638794 MARC2Q969Z3 335 aa12.6□□□□□ -0.39
SMN2-216ENST00000638794 SRSF8Q9BRL6 282 aaKnown RBP12.6□□□□□ -0.39
SMN2-216ENST00000638794 GGTLC1Q9BX51 225 aa12.6□□□□□ -0.39
SMN2-216ENST00000638794 QTRT1Q9BXR0 403 aaKnown RBP12.6□□□□□ -0.39
SMN2-216ENST00000638794 PLEKHA2Q9HB19 425 aa12.6□□□□□ -0.39
SMN2-216ENST00000638794 LOC102724200A0A096LPH7 203 aaPredicted RBP12.59□□□□□ -0.39
SMN2-216ENST00000638794 PTBP1P26599 531 aaKnown RBP eCLIP12.59□□□□□ -0.39
SMN2-216ENST00000638794 CBX5P45973 191 aa12.59□□□□□ -0.39
SMN2-216ENST00000638794 NEDD8Q15843 81 aa12.59□□□□□ -0.39
SMN2-216ENST00000638794 ANKRD55Q3KP44 614 aa12.59□□□□□ -0.39
SMN2-216ENST00000638794 PLET1Q6UQ28 207 aa12.59□□□□□ -0.39
SMN2-216ENST00000638794 RBPMS2Q6ZRY4 209 aaKnown RBP12.59□□□□□ -0.39
SMN2-216ENST00000638794 CD300LFQ8TDQ1 290 aa12.59□□□□□ -0.39
SMN2-216ENST00000638794 OVOL2Q9BRP0 275 aa12.59□□□□□ -0.39
SMN2-216ENST00000638794 THYN1Q9P016 225 aa12.59□□□□□ -0.39
SMN2-216ENST00000638794 MRPL27Q9P0M9 148 aaKnown RBP12.59□□□□□ -0.39
SMN2-216ENST00000638794 TRAV25A0A0B4J276 109 aa12.58□□□□□ -0.4
SMN2-216ENST00000638794 TGOLN2O43493 480 aa12.58□□□□□ -0.4
SMN2-216ENST00000638794 FGF2P09038 288 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms