RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 IGHG2P01859 326 aa15.68■□□□□ 0.1
PDLIM2-221ENST00000622702 COMPP49747 757 aaPredicted RBP15.68■□□□□ 0.1
PDLIM2-221ENST00000622702 AARDQ4LEZ3 155 aa15.68■□□□□ 0.1
PDLIM2-221ENST00000622702 C12orf54Q6X4T0 127 aa15.68■□□□□ 0.1
PDLIM2-221ENST00000622702 OR4A16Q8NH70 328 aa15.68■□□□□ 0.1
PDLIM2-221ENST00000622702 HSPB9Q9BQS6 159 aa15.68■□□□□ 0.1
PDLIM2-221ENST00000622702 ZNF702PQ9H963 129 aa15.68■□□□□ 0.1
PDLIM2-221ENST00000622702 TMEM14BQ9NUH8 114 aa15.68■□□□□ 0.1
PDLIM2-221ENST00000622702 FKBP11Q9NYL4 201 aa15.68■□□□□ 0.1
PDLIM2-221ENST00000622702 CACNG5Q9UF02 275 aa15.68■□□□□ 0.1
PDLIM2-221ENST00000622702 FOXA2Q9Y261 457 aaPredicted RBP15.68■□□□□ 0.1
PDLIM2-221ENST00000622702 NSG2Q9Y328 171 aa15.68■□□□□ 0.1
PDLIM2-221ENST00000622702 SSNA1O43805 119 aa15.67■□□□□ 0.1
PDLIM2-221ENST00000622702 TSPAN9O75954 239 aa15.67■□□□□ 0.1
PDLIM2-221ENST00000622702 SULT1A3P0DMM9 295 aa15.67■□□□□ 0.1
PDLIM2-221ENST00000622702 SULT1A4P0DMN0 295 aa15.67■□□□□ 0.1
PDLIM2-221ENST00000622702 AWAT1Q58HT5 328 aa15.67■□□□□ 0.1
PDLIM2-221ENST00000622702 Q6ZS46 218 aa15.67■□□□□ 0.1
PDLIM2-221ENST00000622702 ZNF429Q86V71 674 aa15.67■□□□□ 0.1
PDLIM2-221ENST00000622702 SPIN2AQ99865 258 aa15.67■□□□□ 0.1
PDLIM2-221ENST00000622702 SPIN2BQ9BPZ2 258 aa15.67■□□□□ 0.1
PDLIM2-221ENST00000622702 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.67■□□□□ 0.1
PDLIM2-221ENST00000622702 ANK2Q01484 3957 aa15.67■□□□□ 0.1
PDLIM2-221ENST00000622702 KCNAB3O43448 404 aa15.66■□□□□ 0.1
PDLIM2-221ENST00000622702 NDUFA7O95182 113 aa15.66■□□□□ 0.1
PDLIM2-221ENST00000622702 OR2B8PP59922 312 aa15.66■□□□□ 0.1
PDLIM2-221ENST00000622702 NDPQ00604 133 aa15.66■□□□□ 0.1
PDLIM2-221ENST00000622702 SMCO1Q147U7 214 aa15.66■□□□□ 0.1
PDLIM2-221ENST00000622702 FXYD3Q14802 87 aa15.66■□□□□ 0.1
PDLIM2-221ENST00000622702 TNXAQ16473 311 aa15.66■□□□□ 0.1
PDLIM2-221ENST00000622702 C9orf152Q5JTZ5 239 aa15.66■□□□□ 0.1
PDLIM2-221ENST00000622702 Q6ZSV7 163 aa15.66■□□□□ 0.1
PDLIM2-221ENST00000622702 OR4F5Q8NH21 305 aa15.66■□□□□ 0.1
PDLIM2-221ENST00000622702 COMMD5Q9GZQ3 224 aa15.66■□□□□ 0.1
PDLIM2-221ENST00000622702 ZNF257Q9Y2Q1 563 aa15.66■□□□□ 0.1
PDLIM2-221ENST00000622702 MPTX1A8MV57 137 aa15.65■□□□□ 0.1
PDLIM2-221ENST00000622702 PITX3O75364 302 aa15.65■□□□□ 0.1
PDLIM2-221ENST00000622702 CNIH1O95406 144 aa15.65■□□□□ 0.1
PDLIM2-221ENST00000622702 MDKP21741 143 aaPredicted RBP15.65■□□□□ 0.1
PDLIM2-221ENST00000622702 GNB1P62873 340 aa15.65■□□□□ 0.1
PDLIM2-221ENST00000622702 C2orf68Q2NKX9 166 aa15.65■□□□□ 0.1
PDLIM2-221ENST00000622702 THOC7Q6I9Y2 204 aaKnown RBP15.65■□□□□ 0.1
PDLIM2-221ENST00000622702 SLC35E3Q7Z769 313 aa15.65■□□□□ 0.1
PDLIM2-221ENST00000622702 OR5B3Q8NH48 314 aa15.65■□□□□ 0.1
PDLIM2-221ENST00000622702 ARPC1AQ92747 370 aa15.65■□□□□ 0.1
PDLIM2-221ENST00000622702 OR51B2Q9Y5P1 312 aa15.65■□□□□ 0.1
PDLIM2-221ENST00000622702 CCSO14618 274 aa15.65■□□□□ 0.1
PDLIM2-221ENST00000622702 RBMXL2O75526 392 aaKnown RBP15.65■□□□□ 0.1
PDLIM2-221ENST00000622702 RPL27AP46776 148 aaKnown RBP15.65■□□□□ 0.1
PDLIM2-221ENST00000622702 C10orf55Q5SWW7 151 aa15.65■□□□□ 0.1
PDLIM2-221ENST00000622702 SRSF12Q8WXF0 261 aaKnown RBP15.65■□□□□ 0.1
PDLIM2-221ENST00000622702 OR10C1Q96KK4 312 aa15.65■□□□□ 0.1
PDLIM2-221ENST00000622702 QTRT1Q9BXR0 403 aaKnown RBP15.65■□□□□ 0.1
PDLIM2-221ENST00000622702 CACFD1Q9UGQ2 172 aa15.65■□□□□ 0.1
PDLIM2-221ENST00000622702 ZNF580Q9UK33 172 aa15.65■□□□□ 0.1
PDLIM2-221ENST00000622702 TEX50A0A1B0GTY4 177 aa15.64■□□□□ 0.09
PDLIM2-221ENST00000622702 LINC01548A6NM66 108 aa15.64■□□□□ 0.09
PDLIM2-221ENST00000622702 IGF1P05019 195 aa15.64■□□□□ 0.09
PDLIM2-221ENST00000622702 MYOD1P15172 320 aa15.64■□□□□ 0.09
PDLIM2-221ENST00000622702 HSPE1P61604 102 aaKnown RBP15.64■□□□□ 0.09
PDLIM2-221ENST00000622702 OR5M8Q8NGP6 311 aa15.64■□□□□ 0.09
PDLIM2-221ENST00000622702 OR1L8Q8NGR8 309 aa15.64■□□□□ 0.09
PDLIM2-221ENST00000622702 OR52E5Q8NH55 327 aa15.64■□□□□ 0.09
PDLIM2-221ENST00000622702 MED28Q9H204 178 aa15.64■□□□□ 0.09
PDLIM2-221ENST00000622702 C16orf95Q9H693 158 aa15.64■□□□□ 0.09
PDLIM2-221ENST00000622702 GOSR2O14653 212 aa15.63■□□□□ 0.09
PDLIM2-221ENST00000622702 ATP6V0E1O15342 81 aa15.63■□□□□ 0.09
PDLIM2-221ENST00000622702 ST8SIA3O43173 380 aa15.63■□□□□ 0.09
PDLIM2-221ENST00000622702 EGR2P11161 476 aaPredicted RBP15.63■□□□□ 0.09
PDLIM2-221ENST00000622702 CRIP2P52943 208 aaPredicted RBP15.63■□□□□ 0.09
PDLIM2-221ENST00000622702 IAH1Q2TAA2 248 aaPredicted RBP15.63■□□□□ 0.09
PDLIM2-221ENST00000622702 PDLIM3Q53GG5 364 aaPredicted RBP15.63■□□□□ 0.09
PDLIM2-221ENST00000622702 GSG1LQ6UXU4 331 aa15.63■□□□□ 0.09
PDLIM2-221ENST00000622702 C3orf56Q8N813 242 aa15.63■□□□□ 0.09
PDLIM2-221ENST00000622702 SGMS2Q8NHU3 365 aa15.63■□□□□ 0.09
PDLIM2-221ENST00000622702 PARP11Q9NR21 331 aa15.63■□□□□ 0.09
PDLIM2-221ENST00000622702 NDUFA4L2Q9NRX3 87 aa15.63■□□□□ 0.09
PDLIM2-221ENST00000622702 FBXO7Q9Y3I1 522 aa15.63■□□□□ 0.09
PDLIM2-221ENST00000622702 TET2Q6N021 2002 aaPredicted RBP15.63■□□□□ 0.09
PDLIM2-221ENST00000622702 C13orf42A0A1B0GVH6 325 aa15.62■□□□□ 0.09
PDLIM2-221ENST00000622702 A0A1B0GW64 132 aa15.62■□□□□ 0.09
PDLIM2-221ENST00000622702 C5orf51A6NDU8 294 aa15.62■□□□□ 0.09
PDLIM2-221ENST00000622702 CGB1A6NKQ9 187 aa15.62■□□□□ 0.09
PDLIM2-221ENST00000622702 E7EUB6 86 aa15.62■□□□□ 0.09
PDLIM2-221ENST00000622702 AP4M1O00189 453 aa15.62■□□□□ 0.09
PDLIM2-221ENST00000622702 RRAS2P62070 204 aaPredicted RBP15.62■□□□□ 0.09
PDLIM2-221ENST00000622702 ZBTB8BQ8NAP8 495 aaPredicted RBP15.62■□□□□ 0.09
PDLIM2-221ENST00000622702 OR1S1Q8NH92 325 aa15.62■□□□□ 0.09
PDLIM2-221ENST00000622702 OR2T6Q8NHC8 308 aa15.62■□□□□ 0.09
PDLIM2-221ENST00000622702 LINC01006Q8NI28 216 aa15.62■□□□□ 0.09
PDLIM2-221ENST00000622702 GRPEL2Q8TAA5 225 aa15.62■□□□□ 0.09
PDLIM2-221ENST00000622702 MGAT4CQ9UBM8 478 aa15.62■□□□□ 0.09
PDLIM2-221ENST00000622702 A0A1B0GUS0 222 aa15.61■□□□□ 0.09
PDLIM2-221ENST00000622702 CLPSL1A2RUU4 121 aa15.61■□□□□ 0.09
PDLIM2-221ENST00000622702 MSGN1A6NI15 193 aa15.61■□□□□ 0.09
PDLIM2-221ENST00000622702 FAM25EA8MYX2 175 aa15.61■□□□□ 0.09
PDLIM2-221ENST00000622702 FAM90A26D6RGX4 464 aa15.61■□□□□ 0.09
PDLIM2-221ENST00000622702 OPN1MWP04001 364 aa15.61■□□□□ 0.09
PDLIM2-221ENST00000622702 OPN1MW2P0DN77 364 aa15.61■□□□□ 0.09
PDLIM2-221ENST00000622702 OPN1MW3P0DN78 364 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms