RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 REG1BP48304 166 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 INSL3P51460 131 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 OR11H1Q8NG94 326 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 OR4A4PQ8NGN8 299 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 OR13A1Q8NGR1 328 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 RFESDQ8TAC1 157 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 DCUN1D4Q92564 292 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 RHOFQ9HBH0 211 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 C12orf4Q9NQ89 552 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 LIN7CQ9NUP9 197 aaKnown RBP6.11□□□□□ -1.43
CLK1-215ENST00000621181 IDI2-AS1Q9NZ38 188 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 CARHSP1Q9Y2V2 147 aaKnown RBP6.11□□□□□ -1.43
CLK1-215ENST00000621181 IGHV1-3A0A0C4DH29 117 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 SDCBPO00560 298 aaPredicted RBP6.11□□□□□ -1.43
CLK1-215ENST00000621181 GAPDHP04406 335 aaKnown RBP6.11□□□□□ -1.43
CLK1-215ENST00000621181 OR8U8P0C7N1 319 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 TMEM225BP0DP42 221 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 SSTR5P35346 364 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 SRSF3P84103 164 aaKnown RBP6.11□□□□□ -1.43
CLK1-215ENST00000621181 ARFRP1Q13795 201 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 ARL6IP1Q15041 203 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 Q6P435 159 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 Q8N9W7 124 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 MRGPRDQ8TDS7 321 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 EAF1Q96JC9 268 aaPredicted RBP6.11□□□□□ -1.43
CLK1-215ENST00000621181 SMIM8Q96KF7 97 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 GPER1Q99527 375 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 RASL11BQ9BPW5 248 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 ST6GALNAC5Q9BVH7 336 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 HSF4Q9ULV5 492 aa6.11□□□□□ -1.43
CLK1-215ENST00000621181 A0A1W2PPE3 182 aa6.1□□□□□ -1.43
CLK1-215ENST00000621181 NUPL2O15504 423 aaKnown RBP6.1□□□□□ -1.43
CLK1-215ENST00000621181 HTR3BO95264 441 aa6.1□□□□□ -1.43
CLK1-215ENST00000621181 CTSDP07339 412 aaPredicted RBP6.1□□□□□ -1.43
CLK1-215ENST00000621181 FRMD6-AS1P0C7T7 363 aa6.1□□□□□ -1.43
CLK1-215ENST00000621181 CGB3P0DN86 165 aa6.1□□□□□ -1.43
CLK1-215ENST00000621181 CGB7P0DN87 165 aa6.1□□□□□ -1.43
CLK1-215ENST00000621181 RAB32Q13637 225 aa6.1□□□□□ -1.43
CLK1-215ENST00000621181 FHL3Q13643 280 aa6.1□□□□□ -1.43
CLK1-215ENST00000621181 EBI3Q14213 229 aa6.1□□□□□ -1.43
CLK1-215ENST00000621181 TMEM268Q5VZI3 342 aa6.1□□□□□ -1.43
CLK1-215ENST00000621181 ZFAND6Q6FIF0 208 aa6.1□□□□□ -1.43
CLK1-215ENST00000621181 DHRS11Q6UWP2 260 aa6.1□□□□□ -1.43
CLK1-215ENST00000621181 C6orf201Q7Z4U5 140 aa6.1□□□□□ -1.43
CLK1-215ENST00000621181 ZNF429Q86V71 674 aa6.1□□□□□ -1.43
CLK1-215ENST00000621181 SAXO1Q8IYX7 474 aa6.1□□□□□ -1.43
CLK1-215ENST00000621181 PUSL1Q8N0Z8 303 aaKnown RBP6.1□□□□□ -1.43
CLK1-215ENST00000621181 RNF152Q8N8N0 203 aa6.1□□□□□ -1.43
CLK1-215ENST00000621181 CLRN3Q8NCR9 226 aa6.1□□□□□ -1.43
CLK1-215ENST00000621181 OR2T10Q8NGZ9 312 aa6.1□□□□□ -1.43
CLK1-215ENST00000621181 EDARADDQ8WWZ3 215 aa6.1□□□□□ -1.43
CLK1-215ENST00000621181 MAFIPQ8WZ33 124 aa6.1□□□□□ -1.43
CLK1-215ENST00000621181 AIFM2Q9BRQ8 373 aa6.1□□□□□ -1.43
CLK1-215ENST00000621181 NKX6-2Q9C056 277 aaPredicted RBP6.1□□□□□ -1.43
CLK1-215ENST00000621181 EHFQ9NZC4 300 aa6.1□□□□□ -1.43
CLK1-215ENST00000621181 ZNF581Q9P0T4 197 aa6.1□□□□□ -1.43
CLK1-215ENST00000621181 CRYM-AS1A6NIL9 109 aa6.09□□□□□ -1.43
CLK1-215ENST00000621181 MOSP00540 346 aa6.09□□□□□ -1.43
CLK1-215ENST00000621181 IGHG4P01861 327 aa6.09□□□□□ -1.43
CLK1-215ENST00000621181 OR5H8P0DN80 308 aa6.09□□□□□ -1.43
CLK1-215ENST00000621181 SERPINA2P20848 420 aa6.09□□□□□ -1.43
CLK1-215ENST00000621181 PSMB8P28062 276 aa6.09□□□□□ -1.43
CLK1-215ENST00000621181 ZNF616Q08AN1 781 aa6.09□□□□□ -1.43
CLK1-215ENST00000621181 ZNF816Q0VGE8 651 aaPredicted RBP6.09□□□□□ -1.43
CLK1-215ENST00000621181 GUCA2BQ16661 112 aa6.09□□□□□ -1.43
CLK1-215ENST00000621181 RNF141Q8WVD5 230 aa6.09□□□□□ -1.43
CLK1-215ENST00000621181 TMED6Q8WW62 240 aa6.09□□□□□ -1.43
CLK1-215ENST00000621181 SAT2Q96F10 170 aaPredicted RBP6.09□□□□□ -1.43
CLK1-215ENST00000621181 HSPB9Q9BQS6 159 aa6.09□□□□□ -1.43
CLK1-215ENST00000621181 HDHD3Q9BSH5 251 aaPredicted RBP6.09□□□□□ -1.43
CLK1-215ENST00000621181 ARV1Q9H2C2 271 aa6.09□□□□□ -1.43
CLK1-215ENST00000621181 LINC00574Q9H8X3 128 aa6.09□□□□□ -1.43
CLK1-215ENST00000621181 TRAV39A0A0B4J263 110 aa6.09□□□□□ -1.44
CLK1-215ENST00000621181 NPIPB11E5RHQ5 1161 aa6.09□□□□□ -1.44
CLK1-215ENST00000621181 GPR31O00270 319 aa6.09□□□□□ -1.44
CLK1-215ENST00000621181 SAP30O75446 220 aa6.09□□□□□ -1.44
CLK1-215ENST00000621181 DTYMKP23919 212 aa6.09□□□□□ -1.44
CLK1-215ENST00000621181 PJVKQ0ZLH3 352 aa6.09□□□□□ -1.44
CLK1-215ENST00000621181 BTNL8Q6UX41 500 aa6.09□□□□□ -1.44
CLK1-215ENST00000621181 IL34Q6ZMJ4 242 aa6.09□□□□□ -1.44
CLK1-215ENST00000621181 Q8N6K4 173 aa6.09□□□□□ -1.44
CLK1-215ENST00000621181 LRTM2Q8N967 370 aa6.09□□□□□ -1.44
CLK1-215ENST00000621181 OR10A7Q8NGE5 316 aa6.09□□□□□ -1.44
CLK1-215ENST00000621181 OR1N2Q8NGR9 330 aa6.09□□□□□ -1.44
CLK1-215ENST00000621181 LYPD6BQ8NI32 183 aa6.09□□□□□ -1.44
CLK1-215ENST00000621181 ARL11Q969Q4 196 aa6.09□□□□□ -1.44
CLK1-215ENST00000621181 OR5B12Q96R08 314 aa6.09□□□□□ -1.44
CLK1-215ENST00000621181 S1PR3Q99500 378 aa6.09□□□□□ -1.44
CLK1-215ENST00000621181 NCOR1P1Q9H4R4 102 aa6.09□□□□□ -1.44
CLK1-215ENST00000621181 IL36GQ9NZH8 169 aa6.09□□□□□ -1.44
CLK1-215ENST00000621181 AK3Q9UIJ7 227 aa6.09□□□□□ -1.44
CLK1-215ENST00000621181 ANXA10Q9UJ72 324 aa6.09□□□□□ -1.44
CLK1-215ENST00000621181 TRAV24A0A0B4J272 114 aa6.08□□□□□ -1.44
CLK1-215ENST00000621181 TAAR5O14804 337 aa6.08□□□□□ -1.44
CLK1-215ENST00000621181 DEDDO75618 318 aa6.08□□□□□ -1.44
CLK1-215ENST00000621181 CD5P06127 495 aa6.08□□□□□ -1.44
CLK1-215ENST00000621181 FCGR3AP08637 254 aa6.08□□□□□ -1.44
CLK1-215ENST00000621181 IL3RAP26951 378 aa6.08□□□□□ -1.44
CLK1-215ENST00000621181 CD1BP29016 333 aa6.08□□□□□ -1.44
CLK1-215ENST00000621181 LPAR6P43657 344 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms