RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 ARPC1AQ92747 370 aa10.72□□□□□ -0.69
NEK3-210ENST00000620675 GPR146Q96CH1 333 aa10.72□□□□□ -0.69
NEK3-210ENST00000620675 MARVELD1Q9BSK0 173 aa10.72□□□□□ -0.69
NEK3-210ENST00000620675 WNT10AQ9GZT5 417 aa10.72□□□□□ -0.69
NEK3-210ENST00000620675 ALX4Q9H161 411 aaPredicted RBP10.72□□□□□ -0.69
NEK3-210ENST00000620675 CMYA5Q8N3K9 4069 aa10.71□□□□□ -0.69
NEK3-210ENST00000620675 HMX3A6NHT5 357 aa10.71□□□□□ -0.69
NEK3-210ENST00000620675 MPTX1A8MV57 137 aa10.71□□□□□ -0.69
NEK3-210ENST00000620675 INMT-MINDY4F8WBC2 141 aa10.71□□□□□ -0.69
NEK3-210ENST00000620675 ADAP1O75689 374 aa10.71□□□□□ -0.69
NEK3-210ENST00000620675 COMPP49747 757 aaPredicted RBP10.71□□□□□ -0.69
NEK3-210ENST00000620675 MMD2Q8IY49 270 aa10.71□□□□□ -0.69
NEK3-210ENST00000620675 STPG2Q8N412 459 aa10.71□□□□□ -0.69
NEK3-210ENST00000620675 LFNGQ8NES3 379 aa10.71□□□□□ -0.69
NEK3-210ENST00000620675 VSTM2AQ8TAG5 236 aa10.71□□□□□ -0.69
NEK3-210ENST00000620675 SRSF12Q8WXF0 261 aaKnown RBP10.71□□□□□ -0.69
NEK3-210ENST00000620675 MSGN1A6NI15 193 aa10.7□□□□□ -0.7
NEK3-210ENST00000620675 SOX15O60248 233 aa10.7□□□□□ -0.7
NEK3-210ENST00000620675 B3GALNT1O75752 331 aa10.7□□□□□ -0.7
NEK3-210ENST00000620675 HLA-GP17693 338 aa10.7□□□□□ -0.7
NEK3-210ENST00000620675 SPINK9Q5DT21 86 aa10.7□□□□□ -0.7
NEK3-210ENST00000620675 NMSQ5H8A3 153 aa10.7□□□□□ -0.7
NEK3-210ENST00000620675 C11orf87Q6NUJ2 197 aa10.7□□□□□ -0.7
NEK3-210ENST00000620675 FAM219AQ8IW50 185 aa10.7□□□□□ -0.7
NEK3-210ENST00000620675 WIPF2Q8TF74 440 aaPredicted RBP10.7□□□□□ -0.7
NEK3-210ENST00000620675 TEX22C9J3V5 150 aa10.7□□□□□ -0.7
NEK3-210ENST00000620675 NXPH3O95157 252 aa10.7□□□□□ -0.7
NEK3-210ENST00000620675 PTTG1O95997 202 aa10.7□□□□□ -0.7
NEK3-210ENST00000620675 IGF1P05019 195 aa10.7□□□□□ -0.7
NEK3-210ENST00000620675 HOXB5P09067 269 aa10.7□□□□□ -0.7
NEK3-210ENST00000620675 ANXA3P12429 323 aa10.7□□□□□ -0.7
NEK3-210ENST00000620675 FOXL1Q12952 345 aa10.7□□□□□ -0.7
NEK3-210ENST00000620675 C19orf54Q5BKX5 351 aa10.7□□□□□ -0.7
NEK3-210ENST00000620675 LGI3Q8N145 548 aa10.7□□□□□ -0.7
NEK3-210ENST00000620675 OR10W1Q8NGF6 305 aa10.7□□□□□ -0.7
NEK3-210ENST00000620675 FYTTD1Q96QD9 318 aaKnown RBP10.7□□□□□ -0.7
NEK3-210ENST00000620675 QTRT1Q9BXR0 403 aaKnown RBP10.7□□□□□ -0.7
NEK3-210ENST00000620675 CACNG5Q9UF02 275 aa10.7□□□□□ -0.7
NEK3-210ENST00000620675 MMP24Q9Y5R2 645 aa10.7□□□□□ -0.7
NEK3-210ENST00000620675 TEX50A0A1B0GTY4 177 aa10.69□□□□□ -0.7
NEK3-210ENST00000620675 C15orf61A6NNL5 157 aa10.69□□□□□ -0.7
NEK3-210ENST00000620675 AP4M1O00189 453 aa10.69□□□□□ -0.7
NEK3-210ENST00000620675 KCNAB3O43448 404 aa10.69□□□□□ -0.7
NEK3-210ENST00000620675 DUS4LO95620 317 aaKnown RBP10.69□□□□□ -0.7
NEK3-210ENST00000620675 C2orf68Q2NKX9 166 aa10.69□□□□□ -0.7
NEK3-210ENST00000620675 TCTEX1D4Q5JR98 221 aa10.69□□□□□ -0.7
NEK3-210ENST00000620675 LRTM2Q8N967 370 aa10.69□□□□□ -0.7
NEK3-210ENST00000620675 SGMS2Q8NHU3 365 aa10.69□□□□□ -0.7
NEK3-210ENST00000620675 RNASE11Q8TAA1 199 aaKnown RBP10.69□□□□□ -0.7
NEK3-210ENST00000620675 TMEM14BQ9NUH8 114 aa10.69□□□□□ -0.7
NEK3-210ENST00000620675 A0A0B4J2A0 478 aa10.69□□□□□ -0.7
NEK3-210ENST00000620675 REG1AP05451 166 aa10.69□□□□□ -0.7
NEK3-210ENST00000620675 AREGP15514 252 aa10.69□□□□□ -0.7
NEK3-210ENST00000620675 RPL27AP46776 148 aaKnown RBP10.69□□□□□ -0.7
NEK3-210ENST00000620675 DEFA5Q01523 94 aa10.69□□□□□ -0.7
NEK3-210ENST00000620675 CFHR3Q02985 330 aa10.69□□□□□ -0.7
NEK3-210ENST00000620675 FOXRED2Q8IWF2 684 aa10.69□□□□□ -0.7
NEK3-210ENST00000620675 OR4A5Q8NH83 315 aa10.69□□□□□ -0.7
NEK3-210ENST00000620675 ZNF431Q8TF32 576 aaPredicted RBP10.69□□□□□ -0.7
NEK3-210ENST00000620675 MITD1Q8WV92 249 aa10.69□□□□□ -0.7
NEK3-210ENST00000620675 WFDC12Q8WWY7 111 aa10.69□□□□□ -0.7
NEK3-210ENST00000620675 IL22RA2Q969J5 263 aa10.69□□□□□ -0.7
NEK3-210ENST00000620675 RRNAD1Q96FB5 475 aaKnown RBP10.69□□□□□ -0.7
NEK3-210ENST00000620675 AIFM2Q9BRQ8 373 aa10.69□□□□□ -0.7
NEK3-210ENST00000620675 SHPKQ9UHJ6 478 aa10.69□□□□□ -0.7
NEK3-210ENST00000620675 OR51B2Q9Y5P1 312 aa10.69□□□□□ -0.7
NEK3-210ENST00000620675 TRAV41A0A0B4J266 112 aa10.68□□□□□ -0.7
NEK3-210ENST00000620675 CCSO14618 274 aa10.68□□□□□ -0.7
NEK3-210ENST00000620675 ACTL6BO94805 426 aa10.68□□□□□ -0.7
NEK3-210ENST00000620675 VDAC1P21796 283 aa10.68□□□□□ -0.7
NEK3-210ENST00000620675 PPIFP30405 207 aaKnown RBP10.68□□□□□ -0.7
NEK3-210ENST00000620675 RGS21Q2M5E4 152 aa10.68□□□□□ -0.7
NEK3-210ENST00000620675 GGNBP1Q5YKI7 109 aa10.68□□□□□ -0.7
NEK3-210ENST00000620675 UNQ5815/PRO19632Q6UWF5 114 aa10.68□□□□□ -0.7
NEK3-210ENST00000620675 UXS1Q8NBZ7 420 aa10.68□□□□□ -0.7
NEK3-210ENST00000620675 OR5T1Q8NG75 326 aa10.68□□□□□ -0.7
NEK3-210ENST00000620675 HINT2Q9BX68 163 aa10.68□□□□□ -0.7
NEK3-210ENST00000620675 PSMB11A5LHX3 300 aa10.67□□□□□ -0.7
NEK3-210ENST00000620675 ST8SIA3O43173 380 aa10.67□□□□□ -0.7
NEK3-210ENST00000620675 RBMXL2O75526 392 aaKnown RBP10.67□□□□□ -0.7
NEK3-210ENST00000620675 SNAPC5O75971 98 aa10.67□□□□□ -0.7
NEK3-210ENST00000620675 PRH1P02810 166 aa10.67□□□□□ -0.7
NEK3-210ENST00000620675 IL5P05113 134 aa10.67□□□□□ -0.7
NEK3-210ENST00000620675 CD28P10747 220 aa10.67□□□□□ -0.7
NEK3-210ENST00000620675 CENPVQ7Z7K6 275 aaPredicted RBP10.67□□□□□ -0.7
NEK3-210ENST00000620675 CADM3Q8N126 398 aa10.67□□□□□ -0.7
NEK3-210ENST00000620675 OR4A16Q8NH70 328 aa10.67□□□□□ -0.7
NEK3-210ENST00000620675 LSM10Q969L4 123 aaKnown RBP10.67□□□□□ -0.7
NEK3-210ENST00000620675 KLK15Q9H2R5 256 aa10.67□□□□□ -0.7
NEK3-210ENST00000620675 A0A1W2PN81 502 aa10.67□□□□□ -0.7
NEK3-210ENST00000620675 CHRNA7P36544 502 aa10.67□□□□□ -0.7
NEK3-210ENST00000620675 CRIP2P52943 208 aaPredicted RBP10.67□□□□□ -0.7
NEK3-210ENST00000620675 SRPXP78539 464 aa10.67□□□□□ -0.7
NEK3-210ENST00000620675 OXA1LQ15070 435 aa10.67□□□□□ -0.7
NEK3-210ENST00000620675 MINDY2Q8NBR6 621 aa10.67□□□□□ -0.7
NEK3-210ENST00000620675 OR5AU1Q8NGC0 362 aa10.67□□□□□ -0.7
NEK3-210ENST00000620675 PHB2Q99623 299 aa10.67□□□□□ -0.7
NEK3-210ENST00000620675 COMMD5Q9GZQ3 224 aa10.67□□□□□ -0.7
NEK3-210ENST00000620675 FOXA2Q9Y261 457 aaPredicted RBP10.67□□□□□ -0.7
NEK3-210ENST00000620675 NOTCH3Q9UM47 2321 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms