RNA–Protein interactions for RNA: ENST00000620033.4

CHL1-216, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 7,311 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-216ENST00000620033 PRSS54Q6PEW0 395 aa3.8□□□□□ -1.8
CHL1-216ENST00000620033 MDS2Q8NDY4 140 aa3.8□□□□□ -1.8
CHL1-216ENST00000620033 WNT5BQ9H1J7 359 aa3.8□□□□□ -1.8
CHL1-216ENST00000620033 U3KQK5 164 aa3.8□□□□□ -1.8
CHL1-216ENST00000620033 RRHO14718 337 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 SPRY2O43597 315 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 RPLP1P05386 114 aaKnown RBP3.79□□□□□ -1.8
CHL1-216ENST00000620033 SULT1A1P50225 295 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 OR4D11Q8NGI4 311 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 SMIM12Q96EX1 92 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 ATP6V0BQ99437 205 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 MRPL20Q9BYC9 149 aaKnown RBP3.79□□□□□ -1.8
CHL1-216ENST00000620033 TSC2P49815 1807 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 IQCF6A8MYZ5 107 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 OOSP1A8MZH6 123 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 FSTP19883 344 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 TAGLN2P37802 199 aaKnown RBP3.79□□□□□ -1.8
CHL1-216ENST00000620033 RBM11P57052 281 aaKnown RBP3.79□□□□□ -1.8
CHL1-216ENST00000620033 MESTQ5EB52 335 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 OTUD1Q5VV17 481 aaPredicted RBP3.79□□□□□ -1.8
CHL1-216ENST00000620033 CADM3Q8N126 398 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 OR5H6Q8NGV6 325 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 OR5P3Q8WZ94 311 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 TEX50A0A1B0GTY4 177 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 HIST1H1DP16402 221 aaKnown RBP3.79□□□□□ -1.8
CHL1-216ENST00000620033 VAMP3Q15836 100 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 MBNL2Q5VZF2 373 aaKnown RBP3.79□□□□□ -1.8
CHL1-216ENST00000620033 TMEM88Q6PEY1 159 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 ZNF429Q86V71 674 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 C12orf57Q99622 126 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 PARP12Q9H0J9 701 aaKnown RBP3.79□□□□□ -1.8
CHL1-216ENST00000620033 TMEM140Q9NV12 185 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 NLRC5Q86WI3 1866 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 TMEM272A0A1B0GTI8 110 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 KBTBD11-OT1A0A1B0GTJ5 212 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 RBFOX3A6NFN3 312 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 DNAJC9-AS1A6NH13 148 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 PAX9P55771 341 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 HAGHQ16775 308 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 SNAI3Q3KNW1 292 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 LIMS2Q7Z4I7 341 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 CCL28Q9NRJ3 127 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 HSPB7Q9UBY9 170 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 PXMP4Q9Y6I8 212 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 SIPA1L3O60292 1781 aaPredicted RBP3.79□□□□□ -1.8
CHL1-216ENST00000620033 A0A096LPF7 62 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 SPART-AS1P0CW21 52 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 PSG2P11465 335 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 RPL18AQ02543 176 aaKnown RBP3.79□□□□□ -1.8
CHL1-216ENST00000620033 TOMM20LQ6UXN7 152 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 TMEM123Q8N131 208 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 GBF1Q92538 1859 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 NUP205Q92621 2012 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 DEPPQ9NTK1 212 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 OPN4Q9UHM6 478 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 GPR132Q9UNW8 380 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 TMA7Q9Y2S6 64 aaKnown RBP3.79□□□□□ -1.8
CHL1-216ENST00000620033 LYRM1O43325 122 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 ZNF502Q8TBZ5 544 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 XCL2Q9UBD3 114 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 CD300AQ9UGN4 299 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 CLEC2DQ9UHP7 191 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 CYB5R1Q9UHQ9 305 aa3.79□□□□□ -1.8
CHL1-216ENST00000620033 GOLGA4Q13439 2230 aaKnown RBP3.79□□□□□ -1.8
CHL1-216ENST00000620033 VGLL3A8MV65 326 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 TGOLN2O43493 480 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 CFHR2P36980 270 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 DEFB131AP59861 70 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 KIAA1644Q3SXP7 199 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 RAB37Q96AX2 223 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 A0A0J9YY99 117 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 ANKRD20A5PA0PJZ0 165 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 C15orf61A6NNL5 157 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 M0R381 172 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 CTAG2O75638 210 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 IGF2P01344 180 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 CRYBB2P43320 205 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 TIRAPP58753 221 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 SP6Q3SY56 376 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 MUC21Q5SSG8 566 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 WFDC11Q8NEX6 87 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 ASB13Q8WXK3 278 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 PRR25Q96S07 402 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 ZNF446Q9NWS9 450 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 RFNGQ9Y644 331 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 RHODO00212 210 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 MT-ND4LP03901 98 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 SAA1P0DJI8 122 aaPredicted RBP3.78□□□□□ -1.8
CHL1-216ENST00000620033 MYCNOSP40205 109 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 PAPPA-AS1Q5QFB9 102 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 MRM1Q6IN84 353 aaKnown RBP3.78□□□□□ -1.8
CHL1-216ENST00000620033 C8orf82Q6P1X6 216 aaPredicted RBP3.78□□□□□ -1.8
CHL1-216ENST00000620033 PRSS57Q6UWY2 283 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 SPNS2Q8IVW8 549 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 GDPD1Q8N9F7 314 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 OR8A1Q8NGG7 326 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 VWCEQ96DN2 955 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 DNAJC4Q9NNZ3 241 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 TMEM14BQ9NUH8 114 aa3.78□□□□□ -1.8
CHL1-216ENST00000620033 SLC25A15Q9Y619 301 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms