RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 CXCL1P09341 107 aa14.31□□□□□ -0.12
CNOT3-209ENST00000617930 CT45A6P0DMU7 189 aa14.31□□□□□ -0.12
CNOT3-209ENST00000617930 CT45A5P0DMU8 189 aa14.31□□□□□ -0.12
CNOT3-209ENST00000617930 CT45A7P0DMV0 189 aa14.31□□□□□ -0.12
CNOT3-209ENST00000617930 FGF8P55075 233 aaPredicted RBP14.31□□□□□ -0.12
CNOT3-209ENST00000617930 RELBQ01201 579 aa14.31□□□□□ -0.12
CNOT3-209ENST00000617930 TMEM41BQ5BJD5 291 aa14.31□□□□□ -0.12
CNOT3-209ENST00000617930 LAMP3Q9UQV4 416 aa14.31□□□□□ -0.12
CNOT3-209ENST00000617930 UBE2L5PA0A1B0GUS4 154 aa14.3□□□□□ -0.12
CNOT3-209ENST00000617930 B4DEV8 164 aa14.3□□□□□ -0.12
CNOT3-209ENST00000617930 IFNA1P01562 189 aa14.3□□□□□ -0.12
CNOT3-209ENST00000617930 ELLP55199 621 aaPredicted RBP14.3□□□□□ -0.12
CNOT3-209ENST00000617930 MEF2CQ06413 473 aaPredicted RBP14.3□□□□□ -0.12
CNOT3-209ENST00000617930 OR8G2PQ6IF36 304 aa14.3□□□□□ -0.12
CNOT3-209ENST00000617930 TMPRSS5Q9H3S3 457 aa14.3□□□□□ -0.12
CNOT3-209ENST00000617930 KAAG1Q9UBP8 84 aa14.3□□□□□ -0.12
CNOT3-209ENST00000617930 CHD6Q8TD26 2715 aa14.3□□□□□ -0.12
CNOT3-209ENST00000617930 SOD3P08294 240 aa14.29□□□□□ -0.12
CNOT3-209ENST00000617930 DLX6P56179 175 aa14.29□□□□□ -0.12
CNOT3-209ENST00000617930 SERF2P84101 59 aa14.29□□□□□ -0.12
CNOT3-209ENST00000617930 SLC38A11Q08AI6 406 aa14.29□□□□□ -0.12
CNOT3-209ENST00000617930 ZNF726P1Q15940 193 aa14.29□□□□□ -0.12
CNOT3-209ENST00000617930 C11orf42Q8N5U0 333 aa14.29□□□□□ -0.12
CNOT3-209ENST00000617930 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.29□□□□□ -0.12
CNOT3-209ENST00000617930 MBD3L1Q8WWY6 194 aa14.29□□□□□ -0.12
CNOT3-209ENST00000617930 RCC1LQ96I51 464 aaKnown RBP14.29□□□□□ -0.12
CNOT3-209ENST00000617930 WDR61Q9GZS3 305 aaKnown RBP14.29□□□□□ -0.12
CNOT3-209ENST00000617930 TGIF2-C20orf24A0A0A6YYL0 155 aa14.29□□□□□ -0.12
CNOT3-209ENST00000617930 CYB5BO43169 146 aa14.29□□□□□ -0.12
CNOT3-209ENST00000617930 NDUFA6P56556 154 aa14.29□□□□□ -0.12
CNOT3-209ENST00000617930 PNRC1Q12796 327 aaPredicted RBP14.29□□□□□ -0.12
CNOT3-209ENST00000617930 FAM90A2PQ658T7 463 aa14.29□□□□□ -0.12
CNOT3-209ENST00000617930 C11orf71Q6IPW1 123 aa14.29□□□□□ -0.12
CNOT3-209ENST00000617930 SSX7Q7RTT5 188 aa14.29□□□□□ -0.12
CNOT3-209ENST00000617930 H1FXQ92522 213 aaKnown RBP14.29□□□□□ -0.12
CNOT3-209ENST00000617930 PINX1Q96BK5 328 aaKnown RBP14.29□□□□□ -0.12
CNOT3-209ENST00000617930 ZNF714Q96N38 554 aa14.29□□□□□ -0.12
CNOT3-209ENST00000617930 PARD6GQ9BYG4 376 aaPredicted RBP14.29□□□□□ -0.12
CNOT3-209ENST00000617930 RAB9BQ9NP90 201 aa14.29□□□□□ -0.12
CNOT3-209ENST00000617930 TMEM140Q9NV12 185 aa14.29□□□□□ -0.12
CNOT3-209ENST00000617930 MAP1LC3B2A6NCE7 125 aa14.28□□□□□ -0.12
CNOT3-209ENST00000617930 NDUFB3O43676 98 aa14.28□□□□□ -0.12
CNOT3-209ENST00000617930 RBMXL2O75526 392 aaKnown RBP14.28□□□□□ -0.12
CNOT3-209ENST00000617930 LY6HO94772 140 aa14.28□□□□□ -0.12
CNOT3-209ENST00000617930 IGKV1-16P04430 117 aa14.28□□□□□ -0.12
CNOT3-209ENST00000617930 MAP1LC3BQ9GZQ8 125 aa14.28□□□□□ -0.12
CNOT3-209ENST00000617930 GSN-AS1Q9NRJ2 163 aa14.28□□□□□ -0.12
CNOT3-209ENST00000617930 YLPM1P49750 1951 aaKnown RBP14.28□□□□□ -0.12
CNOT3-209ENST00000617930 SRRM4A7MD48 611 aaKnown RBP14.27□□□□□ -0.12
CNOT3-209ENST00000617930 CEBPZOSA8MTT3 80 aa14.27□□□□□ -0.12
CNOT3-209ENST00000617930 DIAPH2-AS1Q14236 149 aa14.27□□□□□ -0.12
CNOT3-209ENST00000617930 P2RX4Q99571 388 aa14.27□□□□□ -0.12
CNOT3-209ENST00000617930 DOCK11Q5JSL3 2073 aa14.27□□□□□ -0.12
CNOT3-209ENST00000617930 C15orf62A8K5M9 175 aa14.27□□□□□ -0.13
CNOT3-209ENST00000617930 YIF1AO95070 293 aa14.27□□□□□ -0.13
CNOT3-209ENST00000617930 MYOD1P15172 320 aa14.27□□□□□ -0.13
CNOT3-209ENST00000617930 LRRC10Q5BKY1 277 aa14.27□□□□□ -0.13
CNOT3-209ENST00000617930 TAF15Q92804 592 aaKnown RBP eCLIP14.27□□□□□ -0.13
CNOT3-209ENST00000617930 OR51M1Q9H341 326 aa14.27□□□□□ -0.13
CNOT3-209ENST00000617930 GAL3ST2Q9H3Q3 398 aa14.27□□□□□ -0.13
CNOT3-209ENST00000617930 VAX2Q9UIW0 290 aa14.27□□□□□ -0.13
CNOT3-209ENST00000617930 LINC00587B1AMM8 73 aa14.26□□□□□ -0.13
CNOT3-209ENST00000617930 HOXA5P20719 270 aa14.26□□□□□ -0.13
CNOT3-209ENST00000617930 THBS3P49746 956 aa14.26□□□□□ -0.13
CNOT3-209ENST00000617930 DLX1P56177 255 aa14.26□□□□□ -0.13
CNOT3-209ENST00000617930 HNF4GQ14541 408 aa14.26□□□□□ -0.13
CNOT3-209ENST00000617930 ZNF841Q6ZN19 808 aa14.26□□□□□ -0.13
CNOT3-209ENST00000617930 OR4S2Q8NH73 311 aa14.26□□□□□ -0.13
CNOT3-209ENST00000617930 TMEM170AQ8WVE7 144 aa14.26□□□□□ -0.13
CNOT3-209ENST00000617930 AKAP6Q13023 2319 aa14.26□□□□□ -0.13
CNOT3-209ENST00000617930 FAM90A9PA6NNJ1 464 aa14.25□□□□□ -0.13
CNOT3-209ENST00000617930 VDAC2P45880 294 aaPredicted RBP14.25□□□□□ -0.13
CNOT3-209ENST00000617930 PDLIM3Q53GG5 364 aaPredicted RBP14.25□□□□□ -0.13
CNOT3-209ENST00000617930 OR4A47Q6IF82 309 aa14.25□□□□□ -0.13
CNOT3-209ENST00000617930 ZNF833PQ6ZTB9 187 aa14.25□□□□□ -0.13
CNOT3-209ENST00000617930 OR10A7Q8NGE5 316 aa14.25□□□□□ -0.13
CNOT3-209ENST00000617930 RHOVQ96L33 236 aa14.25□□□□□ -0.13
CNOT3-209ENST00000617930 DOK5Q9P104 306 aa14.25□□□□□ -0.13
CNOT3-209ENST00000617930 MIOXQ9UGB7 285 aa14.25□□□□□ -0.13
CNOT3-209ENST00000617930 IL6RP08887 468 aaPredicted RBP14.25□□□□□ -0.13
CNOT3-209ENST00000617930 S100PP25815 95 aa14.25□□□□□ -0.13
CNOT3-209ENST00000617930 S100A2P29034 98 aa14.25□□□□□ -0.13
CNOT3-209ENST00000617930 KIR2DS2P43631 304 aa14.25□□□□□ -0.13
CNOT3-209ENST00000617930 CDX1P47902 265 aaPredicted RBP14.25□□□□□ -0.13
CNOT3-209ENST00000617930 TMEM30BQ3MIR4 351 aa14.25□□□□□ -0.13
CNOT3-209ENST00000617930 TMEM155Q4W5P6 130 aa14.25□□□□□ -0.13
CNOT3-209ENST00000617930 LHX4Q969G2 390 aa14.25□□□□□ -0.13
CNOT3-209ENST00000617930 SLC39A9Q9NUM3 307 aa14.25□□□□□ -0.13
CNOT3-209ENST00000617930 TIMM9Q9Y5J7 89 aa14.25□□□□□ -0.13
CNOT3-209ENST00000617930 CLDN34H7C241 214 aa14.24□□□□□ -0.13
CNOT3-209ENST00000617930 PRB3Q04118 309 aaPredicted RBP14.24□□□□□ -0.13
CNOT3-209ENST00000617930 OR4A16Q8NH70 328 aa14.24□□□□□ -0.13
CNOT3-209ENST00000617930 MRPL20Q9BYC9 149 aaKnown RBP14.24□□□□□ -0.13
CNOT3-209ENST00000617930 TACC2O95359 2948 aa14.24□□□□□ -0.13
CNOT3-209ENST00000617930 IGKV1D-33P01593 117 aa14.24□□□□□ -0.13
CNOT3-209ENST00000617930 IGKV1-33P01594 117 aa14.24□□□□□ -0.13
CNOT3-209ENST00000617930 IGHV2-70P01814 119 aa14.24□□□□□ -0.13
CNOT3-209ENST00000617930 MDKP21741 143 aaPredicted RBP14.24□□□□□ -0.13
CNOT3-209ENST00000617930 REG1BP48304 166 aa14.24□□□□□ -0.13
CNOT3-209ENST00000617930 SPCS3P61009 180 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms