RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 CSMD3Q7Z407 3707 aa13.35□□□□□ -0.27
SMN2-213ENST00000614240 IGLV11-55A0A075B6I3 123 aa13.34□□□□□ -0.27
SMN2-213ENST00000614240 IGHV3-35A0A0C4DH35 117 aa13.34□□□□□ -0.27
SMN2-213ENST00000614240 SSX5O60225 188 aa13.34□□□□□ -0.27
SMN2-213ENST00000614240 FCGR2CP31995 323 aa13.34□□□□□ -0.27
SMN2-213ENST00000614240 GPR183P32249 361 aa13.34□□□□□ -0.27
SMN2-213ENST00000614240 TIMM50Q3ZCQ8 353 aa13.34□□□□□ -0.27
SMN2-213ENST00000614240 UNQ9165/PRO28630Q6UXU0 137 aa13.34□□□□□ -0.27
SMN2-213ENST00000614240 SPAG16Q8N0X2 631 aa13.34□□□□□ -0.27
SMN2-213ENST00000614240 CCL28Q9NRJ3 127 aa13.34□□□□□ -0.27
SMN2-213ENST00000614240 BET1LQ9NYM9 111 aa13.34□□□□□ -0.27
SMN2-213ENST00000614240 THYN1Q9P016 225 aa13.34□□□□□ -0.27
SMN2-213ENST00000614240 MRPL27Q9P0M9 148 aaKnown RBP13.34□□□□□ -0.27
SMN2-213ENST00000614240 HSPA13P48723 471 aa13.33□□□□□ -0.28
SMN2-213ENST00000614240 APOC4P55056 127 aa13.33□□□□□ -0.28
SMN2-213ENST00000614240 OR2B8PP59922 312 aa13.33□□□□□ -0.28
SMN2-213ENST00000614240 KLK9Q2XQG4 91 aa13.33□□□□□ -0.28
SMN2-213ENST00000614240 OR2C3Q8N628 320 aa13.33□□□□□ -0.28
SMN2-213ENST00000614240 BEST4Q8NFU0 473 aa13.33□□□□□ -0.28
SMN2-213ENST00000614240 COMMD5Q9GZQ3 224 aa13.33□□□□□ -0.28
SMN2-213ENST00000614240 KLK9Q9UKQ9 250 aa13.33□□□□□ -0.28
SMN2-213ENST00000614240 RRP15Q9Y3B9 282 aaKnown RBP13.33□□□□□ -0.28
SMN2-213ENST00000614240 A0A0J9YWU9 116 aa13.32□□□□□ -0.28
SMN2-213ENST00000614240 NUPR2A6NF83 97 aa13.32□□□□□ -0.28
SMN2-213ENST00000614240 SULT1C2O00338 296 aa13.32□□□□□ -0.28
SMN2-213ENST00000614240 CYB5BO43169 146 aa13.32□□□□□ -0.28
SMN2-213ENST00000614240 CATR1Q13166 79 aa13.32□□□□□ -0.28
SMN2-213ENST00000614240 IZUMO2Q6UXV1 221 aa13.32□□□□□ -0.28
SMN2-213ENST00000614240 TPRA1Q86W33 373 aa13.32□□□□□ -0.28
SMN2-213ENST00000614240 ZBTB34Q8NCN2 500 aa13.32□□□□□ -0.28
SMN2-213ENST00000614240 OR13F1Q8NGS4 319 aa13.32□□□□□ -0.28
SMN2-213ENST00000614240 ZNF502Q8TBZ5 544 aa13.32□□□□□ -0.28
SMN2-213ENST00000614240 LGALS14Q8TCE9 139 aa13.32□□□□□ -0.28
SMN2-213ENST00000614240 SLC5A7Q9GZV3 580 aa13.32□□□□□ -0.28
SMN2-213ENST00000614240 TXNL4BQ9NX01 149 aaKnown RBP13.32□□□□□ -0.28
SMN2-213ENST00000614240 CGB1A6NKQ9 187 aa13.31□□□□□ -0.28
SMN2-213ENST00000614240 SPRY2O43597 315 aa13.31□□□□□ -0.28
SMN2-213ENST00000614240 C8orf88P0DMB2 117 aa13.31□□□□□ -0.28
SMN2-213ENST00000614240 PTHLHP12272 177 aa13.31□□□□□ -0.28
SMN2-213ENST00000614240 PTBP1P26599 531 aaKnown RBP eCLIP13.31□□□□□ -0.28
SMN2-213ENST00000614240 PSMB9P28065 219 aa13.31□□□□□ -0.28
SMN2-213ENST00000614240 ELLP55199 621 aaPredicted RBP13.31□□□□□ -0.28
SMN2-213ENST00000614240 MSMO1Q15800 293 aa13.31□□□□□ -0.28
SMN2-213ENST00000614240 LYG2Q86SG7 212 aa13.31□□□□□ -0.28
SMN2-213ENST00000614240 DMBX1Q8NFW5 382 aa13.31□□□□□ -0.28
SMN2-213ENST00000614240 C5orf66Q9H5L9 145 aa13.31□□□□□ -0.28
SMN2-213ENST00000614240 RHBDL2Q9NX52 303 aa13.31□□□□□ -0.28
SMN2-213ENST00000614240 UBQLN2Q9UHD9 624 aa13.31□□□□□ -0.28
SMN2-213ENST00000614240 EPPK1P58107 5090 aaKnown RBP13.31□□□□□ -0.28
SMN2-213ENST00000614240 STARD9Q9P2P6 4700 aa13.3□□□□□ -0.28
SMN2-213ENST00000614240 TRAV18A0A075B6X5 111 aa13.3□□□□□ -0.28
SMN2-213ENST00000614240 UPK2O00526 184 aa13.3□□□□□ -0.28
SMN2-213ENST00000614240 RBFOX2O43251 390 aaKnown RBP eCLIP13.3□□□□□ -0.28
SMN2-213ENST00000614240 HPRT1P00492 218 aa13.3□□□□□ -0.28
SMN2-213ENST00000614240 PPYP01298 95 aa13.3□□□□□ -0.28
SMN2-213ENST00000614240 NQO2P16083 231 aa13.3□□□□□ -0.28
SMN2-213ENST00000614240 FGF9P31371 208 aaPredicted RBP13.3□□□□□ -0.28
SMN2-213ENST00000614240 BMI1P35226 326 aa13.3□□□□□ -0.28
SMN2-213ENST00000614240 TAS2R31P59538 309 aa13.3□□□□□ -0.28
SMN2-213ENST00000614240 FXYD4P59646 89 aa13.3□□□□□ -0.28
SMN2-213ENST00000614240 DEFB135Q30KP9 77 aa13.3□□□□□ -0.28
SMN2-213ENST00000614240 Q6ZWC4 215 aa13.3□□□□□ -0.28
SMN2-213ENST00000614240 SPAG8Q99932 426 aaPredicted RBP13.3□□□□□ -0.28
SMN2-213ENST00000614240 SSR3Q9UNL2 185 aa13.3□□□□□ -0.28
SMN2-213ENST00000614240 BIRC6Q9NR09 4857 aa13.29□□□□□ -0.28
SMN2-213ENST00000614240 TRAV3A0A0B4J244 114 aa13.29□□□□□ -0.28
SMN2-213ENST00000614240 IGLC7A0M8Q6 106 aa13.29□□□□□ -0.28
SMN2-213ENST00000614240 UBE2CO00762 179 aa13.29□□□□□ -0.28
SMN2-213ENST00000614240 TGOLN2O43493 480 aa13.29□□□□□ -0.28
SMN2-213ENST00000614240 FCER2P06734 321 aa13.29□□□□□ -0.28
SMN2-213ENST00000614240 RPA2P15927 270 aa13.29□□□□□ -0.28
SMN2-213ENST00000614240 LAMTOR1Q6IAA8 161 aa13.29□□□□□ -0.28
SMN2-213ENST00000614240 SFXN4Q6P4A7 337 aa13.29□□□□□ -0.28
SMN2-213ENST00000614240 CEMP1Q6PRD7 247 aaPredicted RBP13.29□□□□□ -0.28
SMN2-213ENST00000614240 HOGA1Q86XE5 327 aa13.29□□□□□ -0.28
SMN2-213ENST00000614240 WFDC3Q8IUB2 231 aa13.29□□□□□ -0.28
SMN2-213ENST00000614240 GVQW1Q8N7I0 195 aa13.29□□□□□ -0.28
SMN2-213ENST00000614240 STPG3Q8N7X2 389 aa13.29□□□□□ -0.28
SMN2-213ENST00000614240 OR51H1Q8NH63 302 aa13.29□□□□□ -0.28
SMN2-213ENST00000614240 SRSF8Q9BRL6 282 aaKnown RBP13.29□□□□□ -0.28
SMN2-213ENST00000614240 QTRT1Q9BXR0 403 aaKnown RBP13.29□□□□□ -0.28
SMN2-213ENST00000614240 ZNF436Q9C0F3 470 aaPredicted RBP13.29□□□□□ -0.28
SMN2-213ENST00000614240 TMEM140Q9NV12 185 aa13.29□□□□□ -0.28
SMN2-213ENST00000614240 TP53TG1Q9Y2A0 90 aa13.29□□□□□ -0.28
SMN2-213ENST00000614240 KLK5Q9Y337 293 aaPredicted RBP13.29□□□□□ -0.28
SMN2-213ENST00000614240 LYSTQ99698 3801 aa13.28□□□□□ -0.28
SMN2-213ENST00000614240 OR2T8A6NH00 312 aa13.28□□□□□ -0.28
SMN2-213ENST00000614240 OR13C7P0DN81 318 aa13.28□□□□□ -0.28
SMN2-213ENST00000614240 ERVK-16P61578 105 aa13.28□□□□□ -0.28
SMN2-213ENST00000614240 TNFRSF9Q07011 255 aa13.28□□□□□ -0.28
SMN2-213ENST00000614240 AADACL3Q5VUY0 350 aa13.28□□□□□ -0.28
SMN2-213ENST00000614240 SLC25A24Q6NUK1 477 aa13.28□□□□□ -0.28
SMN2-213ENST00000614240 OR10W1Q8NGF6 305 aa13.28□□□□□ -0.28
SMN2-213ENST00000614240 CD300LFQ8TDQ1 290 aa13.28□□□□□ -0.28
SMN2-213ENST00000614240 VN1R17PQ8TDU5 208 aa13.28□□□□□ -0.28
SMN2-213ENST00000614240 C20orf24Q9BUV8 137 aa13.28□□□□□ -0.28
SMN2-213ENST00000614240 DAZ1Q9NQZ3 744 aaKnown RBP13.28□□□□□ -0.28
SMN2-213ENST00000614240 SACSQ9NZJ4 4579 aa13.28□□□□□ -0.28
SMN2-213ENST00000614240 TSPAN4O14817 238 aa13.27□□□□□ -0.29
SMN2-213ENST00000614240 MRPS14O60783 128 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms