RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 C8orf4Q9NR00 106 aa17.25■□□□□ 0.35
MMP28-203ENST00000612672 SPATA2Q9UM82 520 aa17.25■□□□□ 0.35
MMP28-203ENST00000612672 IGLC7A0M8Q6 106 aa17.24■□□□□ 0.35
MMP28-203ENST00000612672 RPA2P15927 270 aa17.24■□□□□ 0.35
MMP28-203ENST00000612672 GADD45AP24522 165 aa17.24■□□□□ 0.35
MMP28-203ENST00000612672 MAP2K4P45985 399 aa17.24■□□□□ 0.35
MMP28-203ENST00000612672 PSMD7P51665 324 aa17.24■□□□□ 0.35
MMP28-203ENST00000612672 SLC38A6Q8IZM9 456 aa17.24■□□□□ 0.35
MMP28-203ENST00000612672 VSTM2AQ8TAG5 236 aa17.24■□□□□ 0.35
MMP28-203ENST00000612672 ZNF414Q96IQ9 312 aa17.24■□□□□ 0.35
MMP28-203ENST00000612672 MAP6D1Q9H9H5 199 aa17.24■□□□□ 0.35
MMP28-203ENST00000612672 TAS2R8Q9NYW2 309 aa17.24■□□□□ 0.35
MMP28-203ENST00000612672 TRAV3A0A0B4J244 114 aa17.23■□□□□ 0.35
MMP28-203ENST00000612672 HIST1H1BP16401 226 aaKnown RBP17.23■□□□□ 0.35
MMP28-203ENST00000612672 CD36P16671 472 aa17.23■□□□□ 0.35
MMP28-203ENST00000612672 ELLP55199 621 aaPredicted RBP17.23■□□□□ 0.35
MMP28-203ENST00000612672 OR2B8PP59922 312 aa17.23■□□□□ 0.35
MMP28-203ENST00000612672 RPL8P62917 257 aaKnown RBP17.23■□□□□ 0.35
MMP28-203ENST00000612672 OGFRL1Q5TC84 451 aaPredicted RBP17.23■□□□□ 0.35
MMP28-203ENST00000612672 OR5B3Q8NH48 314 aa17.23■□□□□ 0.35
MMP28-203ENST00000612672 UFC1Q9Y3C8 167 aa17.23■□□□□ 0.35
MMP28-203ENST00000612672 IGHV3OR16-8A0A075B7F1 116 aa17.22■□□□□ 0.35
MMP28-203ENST00000612672 TGOLN2O43493 480 aa17.22■□□□□ 0.35
MMP28-203ENST00000612672 DEFA4P12838 97 aa17.22■□□□□ 0.35
MMP28-203ENST00000612672 HLA-GP17693 338 aa17.22■□□□□ 0.35
MMP28-203ENST00000612672 TALDO1P37837 337 aa17.22■□□□□ 0.35
MMP28-203ENST00000612672 RCN1Q15293 331 aa17.22■□□□□ 0.35
MMP28-203ENST00000612672 APRG1Q8IVJ8 170 aa17.22■□□□□ 0.35
MMP28-203ENST00000612672 MFSD4AQ8N468 514 aa17.22■□□□□ 0.35
MMP28-203ENST00000612672 CXorf58Q96LI9 332 aa17.22■□□□□ 0.35
MMP28-203ENST00000612672 DHFRP00374 187 aa17.21■□□□□ 0.35
MMP28-203ENST00000612672 RAB6AP20340 208 aa17.21■□□□□ 0.35
MMP28-203ENST00000612672 DTYMKP23919 212 aa17.21■□□□□ 0.35
MMP28-203ENST00000612672 TIMM50Q3ZCQ8 353 aa17.21■□□□□ 0.35
MMP28-203ENST00000612672 PLET1Q6UQ28 207 aa17.21■□□□□ 0.35
MMP28-203ENST00000612672 NR2C2APQ86WQ0 139 aa17.21■□□□□ 0.35
MMP28-203ENST00000612672 TMEM217Q8N7C4 229 aa17.21■□□□□ 0.35
MMP28-203ENST00000612672 NUDCD2Q8WVJ2 157 aa17.21■□□□□ 0.35
MMP28-203ENST00000612672 HSD17B10Q99714 261 aaKnown RBP17.21■□□□□ 0.35
MMP28-203ENST00000612672 IFITM5A6NNB3 132 aa17.2■□□□□ 0.34
MMP28-203ENST00000612672 ZNF207O43670 478 aaKnown RBP17.2■□□□□ 0.34
MMP28-203ENST00000612672 MLLT11Q13015 90 aaPredicted RBP17.2■□□□□ 0.34
MMP28-203ENST00000612672 TRAM1Q15629 374 aa17.2■□□□□ 0.34
MMP28-203ENST00000612672 FBXL17Q9UF56 701 aa17.2■□□□□ 0.34
MMP28-203ENST00000612672 OR2T8A6NH00 312 aa17.19■□□□□ 0.34
MMP28-203ENST00000612672 F8W735 103 aaPredicted RBP17.19■□□□□ 0.34
MMP28-203ENST00000612672 TNFSF12O43508 249 aa17.19■□□□□ 0.34
MMP28-203ENST00000612672 ZNF773Q6PK81 442 aa17.19■□□□□ 0.34
MMP28-203ENST00000612672 OR10W1Q8NGF6 305 aa17.19■□□□□ 0.34
MMP28-203ENST00000612672 GALNT14Q96FL9 552 aa17.19■□□□□ 0.34
MMP28-203ENST00000612672 CHRDL1Q9BU40 450 aa17.19■□□□□ 0.34
MMP28-203ENST00000612672 BET1LQ9NYM9 111 aa17.19■□□□□ 0.34
MMP28-203ENST00000612672 SSX5O60225 188 aa17.18■□□□□ 0.34
MMP28-203ENST00000612672 CTSDP07339 412 aaPredicted RBP17.18■□□□□ 0.34
MMP28-203ENST00000612672 PSMA1P25786 263 aaKnown RBP17.18■□□□□ 0.34
MMP28-203ENST00000612672 PTBP1P26599 531 aaKnown RBP eCLIP17.18■□□□□ 0.34
MMP28-203ENST00000612672 SSX1Q16384 188 aa17.18■□□□□ 0.34
MMP28-203ENST00000612672 CDNFQ49AH0 187 aa17.18■□□□□ 0.34
MMP28-203ENST00000612672 CD300LFQ8TDQ1 290 aa17.18■□□□□ 0.34
MMP28-203ENST00000612672 IGHV3-21A0A0B4J1V1 117 aa17.17■□□□□ 0.34
MMP28-203ENST00000612672 SMIM30A4D0T7 59 aa17.17■□□□□ 0.34
MMP28-203ENST00000612672 CASQ2O14958 399 aaPredicted RBP17.17■□□□□ 0.34
MMP28-203ENST00000612672 DEFB4AO15263 64 aa17.17■□□□□ 0.34
MMP28-203ENST00000612672 SLC22A5O76082 557 aa17.17■□□□□ 0.34
MMP28-203ENST00000612672 PTHLHP12272 177 aa17.17■□□□□ 0.34
MMP28-203ENST00000612672 MFAP2P55001 183 aa17.17■□□□□ 0.34
MMP28-203ENST00000612672 ATG5Q9H1Y0 275 aa17.17■□□□□ 0.34
MMP28-203ENST00000612672 DUSP21Q9H596 190 aa17.17■□□□□ 0.34
MMP28-203ENST00000612672 DAZ1Q9NQZ3 744 aaKnown RBP17.17■□□□□ 0.34
MMP28-203ENST00000612672 TMEM235A6NFC5 223 aa17.16■□□□□ 0.34
MMP28-203ENST00000612672 HRASP01112 189 aa17.16■□□□□ 0.34
MMP28-203ENST00000612672 ADMP35318 185 aa17.16■□□□□ 0.34
MMP28-203ENST00000612672 HACD4Q5VWC8 232 aa17.16■□□□□ 0.34
MMP28-203ENST00000612672 CNIH2Q6PI25 160 aa17.16■□□□□ 0.34
MMP28-203ENST00000612672 ZNF66Q6ZN08 573 aa17.16■□□□□ 0.34
MMP28-203ENST00000612672 C11orf45Q8TAV5 145 aa17.16■□□□□ 0.34
MMP28-203ENST00000612672 MGLLQ99685 303 aa17.16■□□□□ 0.34
MMP28-203ENST00000612672 C11orf68Q9H3H3 251 aaKnown RBP17.16■□□□□ 0.34
MMP28-203ENST00000612672 CCL28Q9NRJ3 127 aa17.16■□□□□ 0.34
MMP28-203ENST00000612672 SCN3BQ9NY72 215 aa17.16■□□□□ 0.34
MMP28-203ENST00000612672 OR4C46A6NHA9 309 aa17.15■□□□□ 0.34
MMP28-203ENST00000612672 RBMS2Q15434 407 aaKnown RBP17.15■□□□□ 0.34
MMP28-203ENST00000612672 RARRES2Q99969 163 aa17.15■□□□□ 0.34
MMP28-203ENST00000612672 CENPOQ9BU64 300 aa17.15■□□□□ 0.34
MMP28-203ENST00000612672 HRASLSQ9HDD0 168 aa17.15■□□□□ 0.34
MMP28-203ENST00000612672 APLNQ9ULZ1 77 aa17.15■□□□□ 0.34
MMP28-203ENST00000612672 HSPG2P98160 4391 aa17.14■□□□□ 0.33
MMP28-203ENST00000612672 MUC4Q99102 2169 aa17.14■□□□□ 0.33
MMP28-203ENST00000612672 TRAV1-2A0A0B4J238 106 aa17.14■□□□□ 0.33
MMP28-203ENST00000612672 UPK2O00526 184 aa17.14■□□□□ 0.33
MMP28-203ENST00000612672 CTXN2P0C2S0 81 aa17.14■□□□□ 0.33
MMP28-203ENST00000612672 WT1-ASQ06250 92 aa17.14■□□□□ 0.33
MMP28-203ENST00000612672 LAMTOR1Q6IAA8 161 aa17.14■□□□□ 0.33
MMP28-203ENST00000612672 OR4A5Q8NH83 315 aa17.14■□□□□ 0.33
MMP28-203ENST00000612672 VN1R17PQ8TDU5 208 aa17.14■□□□□ 0.33
MMP28-203ENST00000612672 RNF2Q99496 336 aa17.14■□□□□ 0.33
MMP28-203ENST00000612672 C20orf24Q9BUV8 137 aa17.14■□□□□ 0.33
MMP28-203ENST00000612672 CSTL1Q9H114 145 aa17.14■□□□□ 0.33
MMP28-203ENST00000612672 ACOT13Q9NPJ3 140 aa17.14■□□□□ 0.33
MMP28-203ENST00000612672 ANXA10Q9UJ72 324 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms