RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 ZDHHC23Q8IYP9 409 aa13.32□□□□□ -0.28
RTN1-209ENST00000611068 FAM89BQ8N5H3 189 aa13.32□□□□□ -0.28
RTN1-209ENST00000611068 OR4F5Q8NH21 305 aa13.32□□□□□ -0.28
RTN1-209ENST00000611068 NRN1Q9NPD7 142 aa13.32□□□□□ -0.28
RTN1-209ENST00000611068 ANXA10Q9UJ72 324 aa13.32□□□□□ -0.28
RTN1-209ENST00000611068 DOCK11Q5JSL3 2073 aa13.32□□□□□ -0.28
RTN1-209ENST00000611068 TMEM267Q0VDI3 215 aaPredicted RBP13.32□□□□□ -0.28
RTN1-209ENST00000611068 KRTCAP3Q53RY4 240 aa13.32□□□□□ -0.28
RTN1-209ENST00000611068 ZNF324BQ6AW86 544 aaPredicted RBP13.32□□□□□ -0.28
RTN1-209ENST00000611068 WDR73Q6P4I2 378 aa13.32□□□□□ -0.28
RTN1-209ENST00000611068 ZNF391Q9UJN7 358 aa13.32□□□□□ -0.28
RTN1-209ENST00000611068 CHST1O43916 411 aa13.31□□□□□ -0.28
RTN1-209ENST00000611068 IFNA1P01562 189 aa13.31□□□□□ -0.28
RTN1-209ENST00000611068 COX5AP20674 150 aa13.31□□□□□ -0.28
RTN1-209ENST00000611068 SGMS2Q8NHU3 365 aa13.31□□□□□ -0.28
RTN1-209ENST00000611068 SHANK1Q9Y566 2161 aa13.31□□□□□ -0.28
RTN1-209ENST00000611068 ANKRD30BLA7E2S9 258 aa13.31□□□□□ -0.28
RTN1-209ENST00000611068 M0R1B8 84 aa13.31□□□□□ -0.28
RTN1-209ENST00000611068 PRRG2O14669 202 aa13.31□□□□□ -0.28
RTN1-209ENST00000611068 EGR1P18146 543 aa13.31□□□□□ -0.28
RTN1-209ENST00000611068 MDH2P40926 338 aaKnown RBP13.31□□□□□ -0.28
RTN1-209ENST00000611068 YPEL3P61236 119 aaPredicted RBP13.31□□□□□ -0.28
RTN1-209ENST00000611068 LHX4Q969G2 390 aa13.31□□□□□ -0.28
RTN1-209ENST00000611068 ADAM20O43506 726 aa13.3□□□□□ -0.28
RTN1-209ENST00000611068 RHBDL1O75783 438 aa13.3□□□□□ -0.28
RTN1-209ENST00000611068 FRMD6-AS1P0C7T7 363 aa13.3□□□□□ -0.28
RTN1-209ENST00000611068 GABRA2P47869 451 aa13.3□□□□□ -0.28
RTN1-209ENST00000611068 PAX9P55771 341 aa13.3□□□□□ -0.28
RTN1-209ENST00000611068 ARF6P62330 175 aa13.3□□□□□ -0.28
RTN1-209ENST00000611068 RBPJQ06330 500 aa13.3□□□□□ -0.28
RTN1-209ENST00000611068 LRRC10Q5BKY1 277 aa13.3□□□□□ -0.28
RTN1-209ENST00000611068 LCN12Q6JVE5 192 aa13.3□□□□□ -0.28
RTN1-209ENST00000611068 MUC15Q8N387 334 aa13.3□□□□□ -0.28
RTN1-209ENST00000611068 GPHA2Q96T91 129 aa13.3□□□□□ -0.28
RTN1-209ENST00000611068 PGPEP1LA6NFU8 196 aa13.3□□□□□ -0.28
RTN1-209ENST00000611068 IFNA5P01569 189 aa13.3□□□□□ -0.28
RTN1-209ENST00000611068 CD99P14209 185 aa13.3□□□□□ -0.28
RTN1-209ENST00000611068 PSG7Q13046 419 aa13.3□□□□□ -0.28
RTN1-209ENST00000611068 CEACAM21Q3KPI0 293 aa13.3□□□□□ -0.28
RTN1-209ENST00000611068 HAPLN4Q86UW8 402 aa13.3□□□□□ -0.28
RTN1-209ENST00000611068 KLHDC1Q8N7A1 406 aa13.3□□□□□ -0.28
RTN1-209ENST00000611068 TCTEX1D1Q8N7M0 179 aa13.3□□□□□ -0.28
RTN1-209ENST00000611068 OR4S2Q8NH73 311 aa13.3□□□□□ -0.28
RTN1-209ENST00000611068 TMEM186Q96B77 213 aa13.3□□□□□ -0.28
RTN1-209ENST00000611068 CDC42EP3Q9UKI2 254 aa13.3□□□□□ -0.28
RTN1-209ENST00000611068 IGHV1-18A0A0C4DH31 117 aa13.29□□□□□ -0.28
RTN1-209ENST00000611068 A0A0G2JNJ9 132 aa13.29□□□□□ -0.28
RTN1-209ENST00000611068 RAB29O14966 203 aa13.29□□□□□ -0.28
RTN1-209ENST00000611068 OR7C1O76099 320 aaPredicted RBP13.29□□□□□ -0.28
RTN1-209ENST00000611068 GRPP07492 148 aa13.29□□□□□ -0.28
RTN1-209ENST00000611068 C3orf79P0CE67 100 aa13.29□□□□□ -0.28
RTN1-209ENST00000611068 PMCHP20382 165 aa13.29□□□□□ -0.28
RTN1-209ENST00000611068 NPPCP23582 126 aa13.29□□□□□ -0.28
RTN1-209ENST00000611068 BAXQ07812 192 aa13.29□□□□□ -0.28
RTN1-209ENST00000611068 SAMD13Q5VXD3 122 aa13.29□□□□□ -0.28
RTN1-209ENST00000611068 OR1N2Q8NGR9 330 aa13.29□□□□□ -0.28
RTN1-209ENST00000611068 Q96M66 194 aa13.29□□□□□ -0.28
RTN1-209ENST00000611068 COL12A1Q99715 3063 aa13.29□□□□□ -0.28
RTN1-209ENST00000611068 MTCH1Q9NZJ7 389 aa13.29□□□□□ -0.28
RTN1-209ENST00000611068 Q9UFV3 132 aa13.29□□□□□ -0.28
RTN1-209ENST00000611068 DPRXA6NFQ7 191 aa13.29□□□□□ -0.28
RTN1-209ENST00000611068 SERPINE3A8MV23 424 aa13.29□□□□□ -0.28
RTN1-209ENST00000611068 TMEM250H0YL14 139 aa13.29□□□□□ -0.28
RTN1-209ENST00000611068 ZNF253O75346 499 aa13.29□□□□□ -0.28
RTN1-209ENST00000611068 AMTP48728 403 aa13.29□□□□□ -0.28
RTN1-209ENST00000611068 SRPXP78539 464 aa13.29□□□□□ -0.28
RTN1-209ENST00000611068 RELBQ01201 579 aa13.29□□□□□ -0.28
RTN1-209ENST00000611068 MPV17L2Q567V2 206 aa13.29□□□□□ -0.28
RTN1-209ENST00000611068 OSR2Q8N2R0 312 aa13.29□□□□□ -0.28
RTN1-209ENST00000611068 KLF14Q8TD94 323 aaPredicted RBP13.29□□□□□ -0.28
RTN1-209ENST00000611068 NEUROG1Q92886 237 aa13.29□□□□□ -0.28
RTN1-209ENST00000611068 TM2D1Q9BX74 207 aa13.29□□□□□ -0.28
RTN1-209ENST00000611068 MRPL18Q9H0U6 180 aaKnown RBP13.29□□□□□ -0.28
RTN1-209ENST00000611068 IGKV1D-33P01593 117 aa13.28□□□□□ -0.28
RTN1-209ENST00000611068 IGKV1-33P01594 117 aa13.28□□□□□ -0.28
RTN1-209ENST00000611068 PPIAL4GP0DN37 164 aa13.28□□□□□ -0.28
RTN1-209ENST00000611068 OR7C2O60412 319 aa13.28□□□□□ -0.28
RTN1-209ENST00000611068 IGKV3-15P01624 115 aa13.28□□□□□ -0.28
RTN1-209ENST00000611068 PSG9Q00887 426 aa13.28□□□□□ -0.28
RTN1-209ENST00000611068 SPIN3Q5JUX0 258 aa13.28□□□□□ -0.28
RTN1-209ENST00000611068 ZNF114Q8NC26 417 aa13.28□□□□□ -0.28
RTN1-209ENST00000611068 OR5P3Q8WZ94 311 aa13.28□□□□□ -0.28
RTN1-209ENST00000611068 DUSP13Q9UII6 198 aa13.28□□□□□ -0.28
RTN1-209ENST00000611068 PAX2Q02962 417 aa13.27□□□□□ -0.28
RTN1-209ENST00000611068 LY6DQ14210 128 aa13.27□□□□□ -0.28
RTN1-209ENST00000611068 GNB4Q9HAV0 340 aa13.27□□□□□ -0.28
RTN1-209ENST00000611068 G3V4G9 280 aa13.27□□□□□ -0.29
RTN1-209ENST00000611068 TIMP3P35625 211 aa13.27□□□□□ -0.29
RTN1-209ENST00000611068 FOXL1Q12952 345 aa13.27□□□□□ -0.29
RTN1-209ENST00000611068 RPP25LQ8N5L8 163 aaKnown RBP13.27□□□□□ -0.29
RTN1-209ENST00000611068 RCHY1Q96PM5 261 aa13.27□□□□□ -0.29
RTN1-209ENST00000611068 OBP2BQ9NPH6 170 aa13.27□□□□□ -0.29
RTN1-209ENST00000611068 SLC39A9Q9NUM3 307 aa13.27□□□□□ -0.29
RTN1-209ENST00000611068 MLNRO43193 412 aa13.26□□□□□ -0.29
RTN1-209ENST00000611068 RBFOX2O43251 390 aaKnown RBP eCLIP13.26□□□□□ -0.29
RTN1-209ENST00000611068 TOX4O94842 621 aa13.26□□□□□ -0.29
RTN1-209ENST00000611068 PSMB3P49720 205 aa13.26□□□□□ -0.29
RTN1-209ENST00000611068 WDR86Q86TI4 376 aa13.26□□□□□ -0.29
RTN1-209ENST00000611068 ZNF295-AS1Q8N0V1 137 aa13.26□□□□□ -0.29
RTN1-209ENST00000611068 SCGB1C1Q8TD33 95 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms