RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 ELF5Q9UKW6 265 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-227ENST00000602011 TP53TG1Q9Y2A0 90 aa13.36□□□□□ -0.27
SHKBP1-227ENST00000602011 UFC1Q9Y3C8 167 aa13.36□□□□□ -0.27
SHKBP1-227ENST00000602011 IGLV11-55A0A075B6I3 123 aa13.35□□□□□ -0.27
SHKBP1-227ENST00000602011 A0A0A6YYH2 397 aa13.35□□□□□ -0.27
SHKBP1-227ENST00000602011 IGKV1D-13A0A0B4J2D9 117 aa13.35□□□□□ -0.27
SHKBP1-227ENST00000602011 A6NJ64 397 aa13.35□□□□□ -0.27
SHKBP1-227ENST00000602011 IGKV1-13P0DP09 117 aa13.35□□□□□ -0.27
SHKBP1-227ENST00000602011 PTBP1P26599 531 aaKnown RBP eCLIP13.35□□□□□ -0.27
SHKBP1-227ENST00000602011 BRWD1-AS2P59051 145 aa13.35□□□□□ -0.27
SHKBP1-227ENST00000602011 CATR1Q13166 79 aa13.35□□□□□ -0.27
SHKBP1-227ENST00000602011 WFDC3Q8IUB2 231 aa13.35□□□□□ -0.27
SHKBP1-227ENST00000602011 CNBD2Q96M20 576 aa13.35□□□□□ -0.27
SHKBP1-227ENST00000602011 YTHDF1Q9BYJ9 559 aaKnown RBP13.35□□□□□ -0.27
SHKBP1-227ENST00000602011 TAS2R8Q9NYW2 309 aa13.35□□□□□ -0.27
SHKBP1-227ENST00000602011 TMEM235A6NFC5 223 aa13.34□□□□□ -0.27
SHKBP1-227ENST00000602011 E7EUB6 86 aa13.34□□□□□ -0.27
SHKBP1-227ENST00000602011 UBE2CO00762 179 aa13.34□□□□□ -0.27
SHKBP1-227ENST00000602011 TMEM127O75204 238 aa13.34□□□□□ -0.27
SHKBP1-227ENST00000602011 HPRT1P00492 218 aa13.34□□□□□ -0.27
SHKBP1-227ENST00000602011 AREGP15514 252 aa13.34□□□□□ -0.27
SHKBP1-227ENST00000602011 NQO2P16083 231 aa13.34□□□□□ -0.27
SHKBP1-227ENST00000602011 ATF4P18848 351 aaPredicted RBP13.34□□□□□ -0.27
SHKBP1-227ENST00000602011 GABARAPL2P60520 117 aa13.34□□□□□ -0.27
SHKBP1-227ENST00000602011 POU2AF1Q16633 256 aa13.34□□□□□ -0.27
SHKBP1-227ENST00000602011 Q6ZWC4 215 aa13.34□□□□□ -0.27
SHKBP1-227ENST00000602011 NR2C2APQ86WQ0 139 aa13.34□□□□□ -0.27
SHKBP1-227ENST00000602011 SPAG16Q8N0X2 631 aa13.34□□□□□ -0.27
SHKBP1-227ENST00000602011 OR2C3Q8N628 320 aa13.34□□□□□ -0.27
SHKBP1-227ENST00000602011 VN1R17PQ8TDU5 208 aa13.34□□□□□ -0.27
SHKBP1-227ENST00000602011 NUDCD2Q8WVJ2 157 aa13.34□□□□□ -0.27
SHKBP1-227ENST00000602011 FCGR1BQ92637 280 aa13.34□□□□□ -0.27
SHKBP1-227ENST00000602011 COMMD5Q9GZQ3 224 aa13.34□□□□□ -0.27
SHKBP1-227ENST00000602011 C5orf66Q9H5L9 145 aa13.34□□□□□ -0.27
SHKBP1-227ENST00000602011 HRASLSQ9HDD0 168 aa13.34□□□□□ -0.27
SHKBP1-227ENST00000602011 TXNL4BQ9NX01 149 aaKnown RBP13.34□□□□□ -0.27
SHKBP1-227ENST00000602011 MLXQ9UH92 298 aa13.34□□□□□ -0.27
SHKBP1-227ENST00000602011 FRAS1Q86XX4 4008 aa13.33□□□□□ -0.28
SHKBP1-227ENST00000602011 FCGR2CP31995 323 aa13.33□□□□□ -0.28
SHKBP1-227ENST00000602011 APOC4P55056 127 aa13.33□□□□□ -0.28
SHKBP1-227ENST00000602011 UBE2UQ5VVX9 321 aa13.33□□□□□ -0.28
SHKBP1-227ENST00000602011 LAMTOR1Q6IAA8 161 aa13.33□□□□□ -0.28
SHKBP1-227ENST00000602011 PLET1Q6UQ28 207 aa13.33□□□□□ -0.28
SHKBP1-227ENST00000602011 BEST4Q8NFU0 473 aa13.33□□□□□ -0.28
SHKBP1-227ENST00000602011 OR1L6Q8NGR2 347 aa13.33□□□□□ -0.28
SHKBP1-227ENST00000602011 SPAG8Q99932 426 aaPredicted RBP13.33□□□□□ -0.28
SHKBP1-227ENST00000602011 OVOL2Q9BRP0 275 aa13.33□□□□□ -0.28
SHKBP1-227ENST00000602011 WFDC10AQ9H1F0 79 aa13.33□□□□□ -0.28
SHKBP1-227ENST00000602011 DAPK2Q9UIK4 370 aa13.33□□□□□ -0.28
SHKBP1-227ENST00000602011 SSR3Q9UNL2 185 aa13.33□□□□□ -0.28
SHKBP1-227ENST00000602011 ETV7Q9Y603 341 aa13.33□□□□□ -0.28
SHKBP1-227ENST00000602011 A0A1B0GW64 132 aa13.32□□□□□ -0.28
SHKBP1-227ENST00000602011 BMI1P35226 326 aa13.32□□□□□ -0.28
SHKBP1-227ENST00000602011 OR2B8PP59922 312 aa13.32□□□□□ -0.28
SHKBP1-227ENST00000602011 TIMM50Q3ZCQ8 353 aa13.32□□□□□ -0.28
SHKBP1-227ENST00000602011 TM4SF20Q53R12 229 aa13.32□□□□□ -0.28
SHKBP1-227ENST00000602011 SSX9Q7RTT3 188 aa13.32□□□□□ -0.28
SHKBP1-227ENST00000602011 HOGA1Q86XE5 327 aa13.32□□□□□ -0.28
SHKBP1-227ENST00000602011 CADM3Q8N126 398 aa13.32□□□□□ -0.28
SHKBP1-227ENST00000602011 ZNF502Q8TBZ5 544 aa13.32□□□□□ -0.28
SHKBP1-227ENST00000602011 SECTM1Q8WVN6 248 aa13.32□□□□□ -0.28
SHKBP1-227ENST00000602011 GIMAP1Q8WWP7 306 aa13.32□□□□□ -0.28
SHKBP1-227ENST00000602011 PLEKHA2Q9HB19 425 aa13.32□□□□□ -0.28
SHKBP1-227ENST00000602011 RHBDL2Q9NX52 303 aa13.32□□□□□ -0.28
SHKBP1-227ENST00000602011 KIR2DL5BA0A0G2JN68 375 aa13.31□□□□□ -0.28
SHKBP1-227ENST00000602011 KIR2DL5BA0A0G2JPC4 375 aa13.31□□□□□ -0.28
SHKBP1-227ENST00000602011 NUPR2A6NF83 97 aa13.31□□□□□ -0.28
SHKBP1-227ENST00000602011 UPK2O00526 184 aa13.31□□□□□ -0.28
SHKBP1-227ENST00000602011 SSX5O60225 188 aa13.31□□□□□ -0.28
SHKBP1-227ENST00000602011 SCAF4O95104 1147 aaKnown RBP13.31□□□□□ -0.28
SHKBP1-227ENST00000602011 PPYP01298 95 aa13.31□□□□□ -0.28
SHKBP1-227ENST00000602011 IGHV3-23P01764 117 aa13.31□□□□□ -0.28
SHKBP1-227ENST00000602011 CBX5P45973 191 aa13.31□□□□□ -0.28
SHKBP1-227ENST00000602011 TNFRSF9Q07011 255 aa13.31□□□□□ -0.28
SHKBP1-227ENST00000602011 ZNF585BQ52M93 769 aa13.31□□□□□ -0.28
SHKBP1-227ENST00000602011 SFXN4Q6P4A7 337 aa13.31□□□□□ -0.28
SHKBP1-227ENST00000602011 SPSB3Q6PJ21 355 aa13.31□□□□□ -0.28
SHKBP1-227ENST00000602011 KIR2DL5AQ8N109 375 aa13.31□□□□□ -0.28
SHKBP1-227ENST00000602011 TMEM217Q8N7C4 229 aa13.31□□□□□ -0.28
SHKBP1-227ENST00000602011 OR13F1Q8NGS4 319 aa13.31□□□□□ -0.28
SHKBP1-227ENST00000602011 KIR2DL5BQ8NHK3 375 aa13.31□□□□□ -0.28
SHKBP1-227ENST00000602011 CACNG8Q8WXS5 425 aa13.31□□□□□ -0.28
SHKBP1-227ENST00000602011 ZNF436Q9C0F3 470 aaPredicted RBP13.31□□□□□ -0.28
SHKBP1-227ENST00000602011 DIABLOQ9NR28 239 aa13.31□□□□□ -0.28
SHKBP1-227ENST00000602011 CCL28Q9NRJ3 127 aa13.31□□□□□ -0.28
SHKBP1-227ENST00000602011 TSPAN4O14817 238 aa13.3□□□□□ -0.28
SHKBP1-227ENST00000602011 CMC4P56277 68 aaPredicted RBP13.3□□□□□ -0.28
SHKBP1-227ENST00000602011 BTNL8Q6UX41 500 aa13.3□□□□□ -0.28
SHKBP1-227ENST00000602011 QTRT1Q9BXR0 403 aaKnown RBP13.3□□□□□ -0.28
SHKBP1-227ENST00000602011 SLC5A7Q9GZV3 580 aa13.3□□□□□ -0.28
SHKBP1-227ENST00000602011 IGLC7A0M8Q6 106 aa13.29□□□□□ -0.28
SHKBP1-227ENST00000602011 SPRY2O43597 315 aa13.29□□□□□ -0.28
SHKBP1-227ENST00000602011 EDN2P20800 178 aa13.29□□□□□ -0.28
SHKBP1-227ENST00000602011 LGALS14Q8TCE9 139 aa13.29□□□□□ -0.28
SHKBP1-227ENST00000602011 LINC00476Q8WZB0 136 aa13.29□□□□□ -0.28
SHKBP1-227ENST00000602011 BSCL2Q96G97 398 aaPredicted RBP13.29□□□□□ -0.28
SHKBP1-227ENST00000602011 COMMD9Q9P000 198 aa13.29□□□□□ -0.28
SHKBP1-227ENST00000602011 TRAV18A0A075B6X5 111 aa13.28□□□□□ -0.28
SHKBP1-227ENST00000602011 MFSD2BA6NFX1 497 aa13.28□□□□□ -0.28
SHKBP1-227ENST00000602011 CGB1A6NKQ9 187 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms