RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 AREGP15514 252 aa14.16□□□□□ -0.14
SHKBP1-202ENST00000593764 RPA2P15927 270 aa14.16□□□□□ -0.14
SHKBP1-202ENST00000593764 UCP3P55916 312 aa14.16□□□□□ -0.14
SHKBP1-202ENST00000593764 OR2B8PP59922 312 aa14.16□□□□□ -0.14
SHKBP1-202ENST00000593764 PHLDA2Q53GA4 152 aa14.16□□□□□ -0.14
SHKBP1-202ENST00000593764 FANCD2OSQ96PS1 177 aa14.16□□□□□ -0.14
SHKBP1-202ENST00000593764 TMEM140Q9NV12 185 aa14.16□□□□□ -0.14
SHKBP1-202ENST00000593764 ZNF256Q9Y2P7 627 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-202ENST00000593764 RGS5O15539 181 aa14.15□□□□□ -0.14
SHKBP1-202ENST00000593764 CD3DP04234 171 aa14.15□□□□□ -0.14
SHKBP1-202ENST00000593764 FGF2P09038 288 aa14.15□□□□□ -0.14
SHKBP1-202ENST00000593764 CTRB1P17538 263 aa14.15□□□□□ -0.14
SHKBP1-202ENST00000593764 PSMB6P28072 239 aa14.15□□□□□ -0.14
SHKBP1-202ENST00000593764 LPAR6P43657 344 aa14.15□□□□□ -0.14
SHKBP1-202ENST00000593764 ATP5G2Q06055 141 aa14.15□□□□□ -0.14
SHKBP1-202ENST00000593764 KLK9Q2XQG4 91 aa14.15□□□□□ -0.14
SHKBP1-202ENST00000593764 CTRB2Q6GPI1 263 aa14.15□□□□□ -0.14
SHKBP1-202ENST00000593764 LPCAT3Q6P1A2 487 aa14.15□□□□□ -0.14
SHKBP1-202ENST00000593764 IL34Q6ZMJ4 242 aa14.15□□□□□ -0.14
SHKBP1-202ENST00000593764 NECAP1Q8NC96 275 aa14.15□□□□□ -0.14
SHKBP1-202ENST00000593764 DMBX1Q8NFW5 382 aa14.15□□□□□ -0.14
SHKBP1-202ENST00000593764 CCDC59Q9P031 241 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-202ENST00000593764 KLK9Q9UKQ9 250 aa14.15□□□□□ -0.14
SHKBP1-202ENST00000593764 MARCH11A6NNE9 402 aa14.14□□□□□ -0.15
SHKBP1-202ENST00000593764 OR2J3O76001 311 aa14.14□□□□□ -0.15
SHKBP1-202ENST00000593764 EXOSC2Q13868 293 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-202ENST00000593764 LHFPL1Q86WI0 220 aa14.14□□□□□ -0.15
SHKBP1-202ENST00000593764 CADM3Q8N126 398 aa14.14□□□□□ -0.15
SHKBP1-202ENST00000593764 C15orf40Q8WUR7 153 aa14.14□□□□□ -0.15
SHKBP1-202ENST00000593764 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-202ENST00000593764 IGLC7A0M8Q6 106 aa14.13□□□□□ -0.15
SHKBP1-202ENST00000593764 DPPA5A6NC42 116 aa14.13□□□□□ -0.15
SHKBP1-202ENST00000593764 H3BMQ9 156 aa14.13□□□□□ -0.15
SHKBP1-202ENST00000593764 SYNJ2BPP57105 145 aa14.13□□□□□ -0.15
SHKBP1-202ENST00000593764 C15orf32Q32M92 178 aa14.13□□□□□ -0.15
SHKBP1-202ENST00000593764 RNASE10Q5GAN6 216 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-202ENST00000593764 TBC1D26Q86UD7 250 aa14.13□□□□□ -0.15
SHKBP1-202ENST00000593764 SLC38A6Q8IZM9 456 aa14.13□□□□□ -0.15
SHKBP1-202ENST00000593764 OR4D10Q8NGI6 311 aa14.13□□□□□ -0.15
SHKBP1-202ENST00000593764 B9D2Q9BPU9 175 aa14.13□□□□□ -0.15
SHKBP1-202ENST00000593764 DMRT1Q9Y5R6 373 aa14.13□□□□□ -0.15
SHKBP1-202ENST00000593764 GABARAPH6UMI1 98 aa14.12□□□□□ -0.15
SHKBP1-202ENST00000593764 BMPR1BO00238 502 aa14.12□□□□□ -0.15
SHKBP1-202ENST00000593764 NDUFB8O95169 186 aa14.12□□□□□ -0.15
SHKBP1-202ENST00000593764 KRASP01116 189 aa14.12□□□□□ -0.15
SHKBP1-202ENST00000593764 CD74P04233 296 aa14.12□□□□□ -0.15
SHKBP1-202ENST00000593764 IFNA6P05013 189 aa14.12□□□□□ -0.15
SHKBP1-202ENST00000593764 REG1AP05451 166 aa14.12□□□□□ -0.15
SHKBP1-202ENST00000593764 SPNP16150 400 aa14.12□□□□□ -0.15
SHKBP1-202ENST00000593764 G6PCP35575 357 aa14.12□□□□□ -0.15
SHKBP1-202ENST00000593764 DCTN2Q13561 401 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-202ENST00000593764 TMEM229BQ8NBD8 167 aa14.12□□□□□ -0.15
SHKBP1-202ENST00000593764 OR9G4Q8NGQ1 327 aa14.12□□□□□ -0.15
SHKBP1-202ENST00000593764 ISOC1Q96CN7 298 aa14.12□□□□□ -0.15
SHKBP1-202ENST00000593764 OR4C12Q96R67 309 aa14.12□□□□□ -0.15
SHKBP1-202ENST00000593764 ELOVL1Q9BW60 279 aa14.12□□□□□ -0.15
SHKBP1-202ENST00000593764 COMMD5Q9GZQ3 224 aa14.12□□□□□ -0.15
SHKBP1-202ENST00000593764 SLIRPQ9GZT3 109 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-202ENST00000593764 FAM212BQ9NTI7 297 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-202ENST00000593764 FBXL7Q9UJT9 491 aa14.12□□□□□ -0.15
SHKBP1-202ENST00000593764 TEX50A0A1B0GTY4 177 aa14.11□□□□□ -0.15
SHKBP1-202ENST00000593764 TBPP20226 339 aa14.11□□□□□ -0.15
SHKBP1-202ENST00000593764 ERVK-16P61578 105 aa14.11□□□□□ -0.15
SHKBP1-202ENST00000593764 RPEL1Q2QD12 228 aa14.11□□□□□ -0.15
SHKBP1-202ENST00000593764 HAPLN4Q86UW8 402 aa14.11□□□□□ -0.15
SHKBP1-202ENST00000593764 ARRDC1Q8N5I2 433 aa14.11□□□□□ -0.15
SHKBP1-202ENST00000593764 OR10W1Q8NGF6 305 aa14.11□□□□□ -0.15
SHKBP1-202ENST00000593764 OR6Q1Q8NGQ2 317 aa14.11□□□□□ -0.15
SHKBP1-202ENST00000593764 SRSF8Q9BRL6 282 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-202ENST00000593764 QTRT1Q9BXR0 403 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-202ENST00000593764 NSG2Q9Y328 171 aa14.11□□□□□ -0.15
SHKBP1-202ENST00000593764 CEPT1Q9Y6K0 416 aa14.11□□□□□ -0.15
SHKBP1-202ENST00000593764 IGLV11-55A0A075B6I3 123 aa14.1□□□□□ -0.15
SHKBP1-202ENST00000593764 LY86O95711 162 aa14.1□□□□□ -0.15
SHKBP1-202ENST00000593764 IGKV1-39P01597 117 aa14.1□□□□□ -0.15
SHKBP1-202ENST00000593764 IGLV1-51P01701 117 aa14.1□□□□□ -0.15
SHKBP1-202ENST00000593764 IGKV1D-39P04432 117 aa14.1□□□□□ -0.15
SHKBP1-202ENST00000593764 PTBP1P26599 531 aaKnown RBP eCLIP14.1□□□□□ -0.15
SHKBP1-202ENST00000593764 S100GP29377 79 aa14.1□□□□□ -0.15
SHKBP1-202ENST00000593764 MRPS10P82664 201 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-202ENST00000593764 DIRAS2Q96HU8 199 aa14.1□□□□□ -0.15
SHKBP1-202ENST00000593764 NDUFA4L2Q9NRX3 87 aa14.1□□□□□ -0.15
SHKBP1-202ENST00000593764 CTDSPLO15194 276 aa14.09□□□□□ -0.15
SHKBP1-202ENST00000593764 DHFRP00374 187 aa14.09□□□□□ -0.15
SHKBP1-202ENST00000593764 CSN3P07498 182 aa14.09□□□□□ -0.15
SHKBP1-202ENST00000593764 PI3P19957 117 aa14.09□□□□□ -0.15
SHKBP1-202ENST00000593764 TAS2R19P59542 299 aa14.09□□□□□ -0.15
SHKBP1-202ENST00000593764 RND3P61587 244 aa14.09□□□□□ -0.15
SHKBP1-202ENST00000593764 SSBP1Q04837 148 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-202ENST00000593764 CD69Q07108 199 aa14.09□□□□□ -0.15
SHKBP1-202ENST00000593764 STEAP1BQ6NZ63 245 aa14.09□□□□□ -0.15
SHKBP1-202ENST00000593764 OR1L8Q8NGR8 309 aa14.09□□□□□ -0.15
SHKBP1-202ENST00000593764 TERB2Q8NHR7 220 aa14.09□□□□□ -0.15
SHKBP1-202ENST00000593764 SMIM4Q8WVI0 70 aa14.09□□□□□ -0.15
SHKBP1-202ENST00000593764 SEC22AQ96IW7 307 aa14.09□□□□□ -0.15
SHKBP1-202ENST00000593764 CCDC140Q96MF4 163 aa14.09□□□□□ -0.15
SHKBP1-202ENST00000593764 S4R3C0 116 aa14.09□□□□□ -0.15
SHKBP1-202ENST00000593764 DBX1A6NMT0 343 aa14.08□□□□□ -0.16
SHKBP1-202ENST00000593764 PPP5D1E7EU14 171 aa14.08□□□□□ -0.16
SHKBP1-202ENST00000593764 RAB3DO95716 219 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms