RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 TAS2R46P59540 309 aa12.99□□□□□ -0.33
RETREG3-210ENST00000590541 LSM3P62310 102 aaKnown RBP12.99□□□□□ -0.33
RETREG3-210ENST00000590541 DEFB114Q30KQ6 69 aa12.99□□□□□ -0.33
RETREG3-210ENST00000590541 DHRS11Q6UWP2 260 aa12.99□□□□□ -0.33
RETREG3-210ENST00000590541 FUNDC2Q9BWH2 189 aa12.99□□□□□ -0.33
RETREG3-210ENST00000590541 ANAPC10Q9UM13 185 aa12.99□□□□□ -0.33
RETREG3-210ENST00000590541 ZNF257Q9Y2Q1 563 aa12.99□□□□□ -0.33
RETREG3-210ENST00000590541 SMIM31A0A1B0GVY4 71 aa12.98□□□□□ -0.33
RETREG3-210ENST00000590541 BMPR1BO00238 502 aa12.98□□□□□ -0.33
RETREG3-210ENST00000590541 DHFRP00374 187 aa12.98□□□□□ -0.33
RETREG3-210ENST00000590541 NAT1P18440 290 aa12.98□□□□□ -0.33
RETREG3-210ENST00000590541 EDN2P20800 178 aa12.98□□□□□ -0.33
RETREG3-210ENST00000590541 PRSS3P35030 304 aa12.98□□□□□ -0.33
RETREG3-210ENST00000590541 TAS2R20P59543 309 aa12.98□□□□□ -0.33
RETREG3-210ENST00000590541 HERV-K104P61576 105 aa12.98□□□□□ -0.33
RETREG3-210ENST00000590541 ATP5G2Q06055 141 aa12.98□□□□□ -0.33
RETREG3-210ENST00000590541 GUCA2BQ16661 112 aa12.98□□□□□ -0.33
RETREG3-210ENST00000590541 SPAG16Q8N0X2 631 aa12.98□□□□□ -0.33
RETREG3-210ENST00000590541 NECAP1Q8NC96 275 aa12.98□□□□□ -0.33
RETREG3-210ENST00000590541 GATAD1Q8WUU5 269 aa12.98□□□□□ -0.33
RETREG3-210ENST00000590541 ZC4H2Q9NQZ6 224 aa12.98□□□□□ -0.33
RETREG3-210ENST00000590541 BET1LQ9NYM9 111 aa12.98□□□□□ -0.33
RETREG3-210ENST00000590541 A0A0J9YWU9 116 aa12.97□□□□□ -0.33
RETREG3-210ENST00000590541 NPIPB5A8MRT5 1133 aa12.97□□□□□ -0.33
RETREG3-210ENST00000590541 HPRT1P00492 218 aa12.97□□□□□ -0.33
RETREG3-210ENST00000590541 APOA1P02647 267 aa12.97□□□□□ -0.33
RETREG3-210ENST00000590541 APELAP0DMC3 54 aa12.97□□□□□ -0.33
RETREG3-210ENST00000590541 PTHLHP12272 177 aa12.97□□□□□ -0.33
RETREG3-210ENST00000590541 RPL27AP46776 148 aaKnown RBP12.97□□□□□ -0.33
RETREG3-210ENST00000590541 TAS2R31P59538 309 aa12.97□□□□□ -0.33
RETREG3-210ENST00000590541 FXYD4P59646 89 aa12.97□□□□□ -0.33
RETREG3-210ENST00000590541 RPL8P62917 257 aaKnown RBP12.97□□□□□ -0.33
RETREG3-210ENST00000590541 RHOGP84095 191 aa12.97□□□□□ -0.33
RETREG3-210ENST00000590541 VKORC1L1Q8N0U8 176 aa12.97□□□□□ -0.33
RETREG3-210ENST00000590541 DYNLRB2Q8TF09 96 aa12.97□□□□□ -0.33
RETREG3-210ENST00000590541 WDR89Q96FK6 387 aaPredicted RBP12.97□□□□□ -0.33
RETREG3-210ENST00000590541 AKIP1Q9NQ31 210 aa12.97□□□□□ -0.33
RETREG3-210ENST00000590541 SLC2A9Q9NRM0 540 aa12.97□□□□□ -0.33
RETREG3-210ENST00000590541 EHFQ9NZC4 300 aa12.97□□□□□ -0.33
RETREG3-210ENST00000590541 DPPA5A6NC42 116 aa12.96□□□□□ -0.33
RETREG3-210ENST00000590541 TNFSF12O43508 249 aa12.96□□□□□ -0.33
RETREG3-210ENST00000590541 ZNF735P0CB33 412 aa12.96□□□□□ -0.33
RETREG3-210ENST00000590541 NQO2P16083 231 aa12.96□□□□□ -0.33
RETREG3-210ENST00000590541 POU2AF1Q16633 256 aa12.96□□□□□ -0.33
RETREG3-210ENST00000590541 OR5H2Q8NGV7 314 aa12.96□□□□□ -0.33
RETREG3-210ENST00000590541 PLEKHA2Q9HB19 425 aa12.96□□□□□ -0.33
RETREG3-210ENST00000590541 VPS13DQ5THJ4 4388 aa12.95□□□□□ -0.34
RETREG3-210ENST00000590541 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.95□□□□□ -0.34
RETREG3-210ENST00000590541 MEIS3P1A6NDR6 274 aa12.95□□□□□ -0.34
RETREG3-210ENST00000590541 TEX22C9J3V5 150 aa12.95□□□□□ -0.34
RETREG3-210ENST00000590541 HIST1H1BP16401 226 aaKnown RBP12.95□□□□□ -0.34
RETREG3-210ENST00000590541 RORCP51449 518 aa12.95□□□□□ -0.34
RETREG3-210ENST00000590541 TNFRSF9Q07011 255 aa12.95□□□□□ -0.34
RETREG3-210ENST00000590541 EXOSC2Q13868 293 aaKnown RBP12.95□□□□□ -0.34
RETREG3-210ENST00000590541 KLK9Q2XQG4 91 aa12.95□□□□□ -0.34
RETREG3-210ENST00000590541 C10orf55Q5SWW7 151 aa12.95□□□□□ -0.34
RETREG3-210ENST00000590541 ZNF818PQ6ZRF7 136 aa12.95□□□□□ -0.34
RETREG3-210ENST00000590541 TMEM17Q86X19 198 aa12.95□□□□□ -0.34
RETREG3-210ENST00000590541 CMTM1Q8IZ96 169 aa12.95□□□□□ -0.34
RETREG3-210ENST00000590541 MOB3AQ96BX8 217 aa12.95□□□□□ -0.34
RETREG3-210ENST00000590541 SRSF8Q9BRL6 282 aaKnown RBP12.95□□□□□ -0.34
RETREG3-210ENST00000590541 GGTLC1Q9BX51 225 aa12.95□□□□□ -0.34
RETREG3-210ENST00000590541 SCPEP1Q9HB40 452 aa12.95□□□□□ -0.34
RETREG3-210ENST00000590541 COMMD9Q9P000 198 aa12.95□□□□□ -0.34
RETREG3-210ENST00000590541 KLK9Q9UKQ9 250 aa12.95□□□□□ -0.34
RETREG3-210ENST00000590541 KLK5Q9Y337 293 aaPredicted RBP12.95□□□□□ -0.34
RETREG3-210ENST00000590541 SULT1C2O00338 296 aa12.94□□□□□ -0.34
RETREG3-210ENST00000590541 FCER2P06734 321 aa12.94□□□□□ -0.34
RETREG3-210ENST00000590541 CRYGCP07315 174 aa12.94□□□□□ -0.34
RETREG3-210ENST00000590541 IL6RP08887 468 aaPredicted RBP12.94□□□□□ -0.34
RETREG3-210ENST00000590541 HLA-GP17693 338 aa12.94□□□□□ -0.34
RETREG3-210ENST00000590541 GNRHRP30968 328 aa12.94□□□□□ -0.34
RETREG3-210ENST00000590541 RFX2P48378 723 aa12.94□□□□□ -0.34
RETREG3-210ENST00000590541 VBP1P61758 197 aa12.94□□□□□ -0.34
RETREG3-210ENST00000590541 NCS1P62166 190 aa12.94□□□□□ -0.34
RETREG3-210ENST00000590541 ZNF45Q02386 682 aa12.94□□□□□ -0.34
RETREG3-210ENST00000590541 AADACL3Q5VUY0 350 aa12.94□□□□□ -0.34
RETREG3-210ENST00000590541 LGALS9CQ6DKI2 356 aa12.94□□□□□ -0.34
RETREG3-210ENST00000590541 THOC7Q6I9Y2 204 aaKnown RBP12.94□□□□□ -0.34
RETREG3-210ENST00000590541 OR4A47Q6IF82 309 aa12.94□□□□□ -0.34
RETREG3-210ENST00000590541 LPCAT3Q6P1A2 487 aa12.94□□□□□ -0.34
RETREG3-210ENST00000590541 MZT2AQ6P582 158 aa12.94□□□□□ -0.34
RETREG3-210ENST00000590541 SSX9Q7RTT3 188 aa12.94□□□□□ -0.34
RETREG3-210ENST00000590541 LYG2Q86SG7 212 aa12.94□□□□□ -0.34
RETREG3-210ENST00000590541 WFDC3Q8IUB2 231 aa12.94□□□□□ -0.34
RETREG3-210ENST00000590541 CADM3Q8N126 398 aa12.94□□□□□ -0.34
RETREG3-210ENST00000590541 OR6F1Q8NGZ6 308 aa12.94□□□□□ -0.34
RETREG3-210ENST00000590541 FYTTD1Q96QD9 318 aaKnown RBP12.94□□□□□ -0.34
RETREG3-210ENST00000590541 ZNF2Q9BSG1 426 aaPredicted RBP12.94□□□□□ -0.34
RETREG3-210ENST00000590541 HRASLSQ9HDD0 168 aa12.94□□□□□ -0.34
RETREG3-210ENST00000590541 COMMD3Q9UBI1 195 aa12.94□□□□□ -0.34
RETREG3-210ENST00000590541 LOC102724200A0A096LPH7 203 aaPredicted RBP12.93□□□□□ -0.34
RETREG3-210ENST00000590541 HMX3A6NHT5 357 aa12.93□□□□□ -0.34
RETREG3-210ENST00000590541 C2orf70A6NJV1 201 aa12.93□□□□□ -0.34
RETREG3-210ENST00000590541 FOLR2P14207 255 aa12.93□□□□□ -0.34
RETREG3-210ENST00000590541 PSMB6P28072 239 aa12.93□□□□□ -0.34
RETREG3-210ENST00000590541 S100GP29377 79 aa12.93□□□□□ -0.34
RETREG3-210ENST00000590541 C15orf32Q32M92 178 aa12.93□□□□□ -0.34
RETREG3-210ENST00000590541 SLC16A13Q7RTY0 426 aa12.93□□□□□ -0.34
RETREG3-210ENST00000590541 OR51H1Q8NH63 302 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms