RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 OR1S2Q8NGQ3 325 aa9.17□□□□□ -0.94
SMAD4-205ENST00000588745 OR5B3Q8NH48 314 aa9.17□□□□□ -0.94
SMAD4-205ENST00000588745 RITA1Q96K30 269 aa9.17□□□□□ -0.94
SMAD4-205ENST00000588745 RNF5Q99942 180 aa9.17□□□□□ -0.94
SMAD4-205ENST00000588745 FKBP11Q9NYL4 201 aa9.17□□□□□ -0.94
SMAD4-205ENST00000588745 ITGB1BP2Q9UKP3 347 aa9.17□□□□□ -0.94
SMAD4-205ENST00000588745 STRAPQ9Y3F4 350 aaKnown RBP9.17□□□□□ -0.94
SMAD4-205ENST00000588745 AUP1Q9Y679 476 aa9.17□□□□□ -0.94
SMAD4-205ENST00000588745 CELSR2Q9HCU4 2923 aa9.17□□□□□ -0.94
SMAD4-205ENST00000588745 WNK2Q9Y3S1 2297 aa9.17□□□□□ -0.94
SMAD4-205ENST00000588745 MED13LQ71F56 2210 aa9.17□□□□□ -0.94
SMAD4-205ENST00000588745 BORCS7-ASMTA0A0B4J1R7 106 aa9.16□□□□□ -0.94
SMAD4-205ENST00000588745 TRAV40A0A0B4J280 105 aa9.16□□□□□ -0.94
SMAD4-205ENST00000588745 RNF223E7ERA6 249 aa9.16□□□□□ -0.94
SMAD4-205ENST00000588745 NPFFO15130 113 aa9.16□□□□□ -0.94
SMAD4-205ENST00000588745 CRYGBP07316 175 aa9.16□□□□□ -0.94
SMAD4-205ENST00000588745 GATA3P23771 443 aa9.16□□□□□ -0.94
SMAD4-205ENST00000588745 CNTFRP26992 372 aa9.16□□□□□ -0.94
SMAD4-205ENST00000588745 SAA4P35542 130 aa9.16□□□□□ -0.94
SMAD4-205ENST00000588745 HBG1P69891 147 aa9.16□□□□□ -0.94
SMAD4-205ENST00000588745 HBG2P69892 147 aa9.16□□□□□ -0.94
SMAD4-205ENST00000588745 ZNF266Q14584 549 aa9.16□□□□□ -0.94
SMAD4-205ENST00000588745 HAPLN4Q86UW8 402 aa9.16□□□□□ -0.94
SMAD4-205ENST00000588745 THNSL2Q86YJ6 484 aa9.16□□□□□ -0.94
SMAD4-205ENST00000588745 KRTAP1-3Q8IUG1 177 aa9.16□□□□□ -0.94
SMAD4-205ENST00000588745 C17orf50Q8WW18 174 aa9.16□□□□□ -0.94
SMAD4-205ENST00000588745 MALSU1Q96EH3 234 aa9.16□□□□□ -0.94
SMAD4-205ENST00000588745 AJUBAQ96IF1 538 aa9.16□□□□□ -0.94
SMAD4-205ENST00000588745 ATP5SQ99766 215 aa9.16□□□□□ -0.94
SMAD4-205ENST00000588745 COMMD5Q9GZQ3 224 aa9.16□□□□□ -0.94
SMAD4-205ENST00000588745 HIPK2Q9H2X6 1198 aa9.16□□□□□ -0.94
SMAD4-205ENST00000588745 ZNF430Q9H8G1 570 aaPredicted RBP9.16□□□□□ -0.94
SMAD4-205ENST00000588745 ENY2Q9NPA8 101 aa9.16□□□□□ -0.94
SMAD4-205ENST00000588745 HEYLQ9NQ87 328 aaPredicted RBP9.16□□□□□ -0.94
SMAD4-205ENST00000588745 TPSG1Q9NRR2 321 aa9.16□□□□□ -0.94
SMAD4-205ENST00000588745 TEX50A0A1B0GTY4 177 aa9.15□□□□□ -0.94
SMAD4-205ENST00000588745 RPS10-NUDT3A0A1W2PQS6 291 aa9.15□□□□□ -0.94
SMAD4-205ENST00000588745 C15orf62A8K5M9 175 aa9.15□□□□□ -0.94
SMAD4-205ENST00000588745 DFFBO76075 338 aa9.15□□□□□ -0.94
SMAD4-205ENST00000588745 SCAF4O95104 1147 aaKnown RBP9.15□□□□□ -0.94
SMAD4-205ENST00000588745 MOSP00540 346 aa9.15□□□□□ -0.94
SMAD4-205ENST00000588745 IGKV1D-33P01593 117 aa9.15□□□□□ -0.94
SMAD4-205ENST00000588745 IGKV1-33P01594 117 aa9.15□□□□□ -0.94
SMAD4-205ENST00000588745 SNRNP70P08621 437 aaKnown RBP9.15□□□□□ -0.94
SMAD4-205ENST00000588745 PAX6P26367 422 aa9.15□□□□□ -0.94
SMAD4-205ENST00000588745 RPP30P78346 268 aaKnown RBP9.15□□□□□ -0.94
SMAD4-205ENST00000588745 ARL16Q0P5N6 197 aa9.15□□□□□ -0.94
SMAD4-205ENST00000588745 MMD2Q8IY49 270 aa9.15□□□□□ -0.94
SMAD4-205ENST00000588745 Q96MF0 132 aa9.15□□□□□ -0.94
SMAD4-205ENST00000588745 HINT2Q9BX68 163 aa9.15□□□□□ -0.94
SMAD4-205ENST00000588745 REG4Q9BYZ8 158 aa9.15□□□□□ -0.94
SMAD4-205ENST00000588745 ARV1Q9H2C2 271 aa9.15□□□□□ -0.94
SMAD4-205ENST00000588745 PLEKHA3Q9HB20 300 aa9.15□□□□□ -0.94
SMAD4-205ENST00000588745 HIF1ANQ9NWT6 349 aa9.15□□□□□ -0.94
SMAD4-205ENST00000588745 GCN1Q92616 2671 aaKnown RBP9.15□□□□□ -0.94
SMAD4-205ENST00000588745 CSMD2Q7Z408 3487 aa9.15□□□□□ -0.94
SMAD4-205ENST00000588745 APCP25054 2843 aa9.14□□□□□ -0.95
SMAD4-205ENST00000588745 IGHV1-69DA0A0B4J2H0 117 aa9.14□□□□□ -0.95
SMAD4-205ENST00000588745 PMS2P5A8MQ11 134 aa9.14□□□□□ -0.95
SMAD4-205ENST00000588745 IGHV1-69P01742 117 aa9.14□□□□□ -0.95
SMAD4-205ENST00000588745 OPN1MWP04001 364 aa9.14□□□□□ -0.95
SMAD4-205ENST00000588745 OPN1MW2P0DN77 364 aa9.14□□□□□ -0.95
SMAD4-205ENST00000588745 OPN1MW3P0DN78 364 aa9.14□□□□□ -0.95
SMAD4-205ENST00000588745 RAB14P61106 215 aa9.14□□□□□ -0.95
SMAD4-205ENST00000588745 SLC38A11Q08AI6 406 aa9.14□□□□□ -0.95
SMAD4-205ENST00000588745 EBI3Q14213 229 aa9.14□□□□□ -0.95
SMAD4-205ENST00000588745 MMDQ15546 238 aa9.14□□□□□ -0.95
SMAD4-205ENST00000588745 PRSS8Q16651 343 aa9.14□□□□□ -0.95
SMAD4-205ENST00000588745 NDUFA5Q16718 116 aa9.14□□□□□ -0.95
SMAD4-205ENST00000588745 MRGPRG-AS1Q2M3A8 158 aa9.14□□□□□ -0.95
SMAD4-205ENST00000588745 CLLU1Q5K131 121 aa9.14□□□□□ -0.95
SMAD4-205ENST00000588745 RUSC1-AS1Q66K80 236 aa9.14□□□□□ -0.95
SMAD4-205ENST00000588745 LILRB2Q8N423 598 aa9.14□□□□□ -0.95
SMAD4-205ENST00000588745 PIP4P2Q8N4L2 257 aa9.14□□□□□ -0.95
SMAD4-205ENST00000588745 SLC24A4Q8NFF2 622 aa9.14□□□□□ -0.95
SMAD4-205ENST00000588745 OR1L8Q8NGR8 309 aa9.14□□□□□ -0.95
SMAD4-205ENST00000588745 OR2T10Q8NGZ9 312 aa9.14□□□□□ -0.95
SMAD4-205ENST00000588745 EAF1Q96JC9 268 aaPredicted RBP9.14□□□□□ -0.95
SMAD4-205ENST00000588745 GINS3Q9BRX5 216 aa9.14□□□□□ -0.95
SMAD4-205ENST00000588745 C7orf69Q9H7B7 122 aa9.14□□□□□ -0.95
SMAD4-205ENST00000588745 NDUFA4L2Q9NRX3 87 aa9.14□□□□□ -0.95
SMAD4-205ENST00000588745 METTL1Q9UBP6 276 aaKnown RBP9.14□□□□□ -0.95
SMAD4-205ENST00000588745 SIGLEC9Q9Y336 463 aa9.14□□□□□ -0.95
SMAD4-205ENST00000588745 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.14□□□□□ -0.954e-10■■■■■ 34.7
SMAD4-205ENST00000588745 A0A1W2PN81 502 aa9.13□□□□□ -0.95
SMAD4-205ENST00000588745 INS-IGF2F8WCM5 200 aa9.13□□□□□ -0.95
SMAD4-205ENST00000588745 RRHO14718 337 aa9.13□□□□□ -0.95
SMAD4-205ENST00000588745 NBR2O15453 112 aa9.13□□□□□ -0.95
SMAD4-205ENST00000588745 NDUFA3O95167 84 aa9.13□□□□□ -0.95
SMAD4-205ENST00000588745 IFNA10P01566 189 aa9.13□□□□□ -0.95
SMAD4-205ENST00000588745 OR8U8P0C7N1 319 aa9.13□□□□□ -0.95
SMAD4-205ENST00000588745 MAS1LP35410 378 aa9.13□□□□□ -0.95
SMAD4-205ENST00000588745 CHRNA7P36544 502 aa9.13□□□□□ -0.95
SMAD4-205ENST00000588745 F2RL1P55085 397 aa9.13□□□□□ -0.95
SMAD4-205ENST00000588745 HES1Q14469 280 aa9.13□□□□□ -0.95
SMAD4-205ENST00000588745 FAM74A1Q5RGS3 127 aa9.13□□□□□ -0.95
SMAD4-205ENST00000588745 C10orf55Q5SWW7 151 aa9.13□□□□□ -0.95
SMAD4-205ENST00000588745 OR8G2PQ6IF36 304 aa9.13□□□□□ -0.95
SMAD4-205ENST00000588745 EIF5AL1Q6IS14 154 aaKnown RBP9.13□□□□□ -0.95
SMAD4-205ENST00000588745 PPP1R27Q86WC6 154 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms