RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 TM4SF20Q53R12 229 aa10.28□□□□□ -0.76
HDAC5-208ENST00000588419 CTRB2Q6GPI1 263 aa10.28□□□□□ -0.76
HDAC5-208ENST00000588419 OR4A47Q6IF82 309 aa10.28□□□□□ -0.76
HDAC5-208ENST00000588419 SFXN4Q6P4A7 337 aa10.28□□□□□ -0.76
HDAC5-208ENST00000588419 ZNF66Q6ZN08 573 aa10.28□□□□□ -0.76
HDAC5-208ENST00000588419 RBPMS2Q6ZRY4 209 aaKnown RBP10.28□□□□□ -0.76
HDAC5-208ENST00000588419 GPHB5Q86YW7 130 aa10.28□□□□□ -0.76
HDAC5-208ENST00000588419 SPAG16Q8N0X2 631 aa10.28□□□□□ -0.76
HDAC5-208ENST00000588419 GVQW1Q8N7I0 195 aa10.28□□□□□ -0.76
HDAC5-208ENST00000588419 BEST4Q8NFU0 473 aa10.28□□□□□ -0.76
HDAC5-208ENST00000588419 RHBDL2Q9NX52 303 aa10.28□□□□□ -0.76
HDAC5-208ENST00000588419 UBQLN2Q9UHD9 624 aa10.28□□□□□ -0.76
HDAC5-208ENST00000588419 LOC102724200A0A096LPH7 203 aaPredicted RBP10.27□□□□□ -0.77
HDAC5-208ENST00000588419 CXorf65A6NEN9 183 aa10.27□□□□□ -0.77
HDAC5-208ENST00000588419 SULT1C2O00338 296 aa10.27□□□□□ -0.77
HDAC5-208ENST00000588419 CRYGCP07315 174 aa10.27□□□□□ -0.77
HDAC5-208ENST00000588419 BRWD1-AS2P59051 145 aa10.27□□□□□ -0.77
HDAC5-208ENST00000588419 GABARAPL2P60520 117 aa10.27□□□□□ -0.77
HDAC5-208ENST00000588419 EIF4EBP1Q13541 118 aaPredicted RBP10.27□□□□□ -0.77
HDAC5-208ENST00000588419 UNQ9165/PRO28630Q6UXU0 137 aa10.27□□□□□ -0.77
HDAC5-208ENST00000588419 TMEM17Q86X19 198 aa10.27□□□□□ -0.77
HDAC5-208ENST00000588419 OR51H1Q8NH63 302 aa10.27□□□□□ -0.77
HDAC5-208ENST00000588419 SLC5A7Q9GZV3 580 aa10.27□□□□□ -0.77
HDAC5-208ENST00000588419 SSR3Q9UNL2 185 aa10.27□□□□□ -0.77
HDAC5-208ENST00000588419 IGLV11-55A0A075B6I3 123 aa10.26□□□□□ -0.77
HDAC5-208ENST00000588419 TRAV18A0A075B6X5 111 aa10.26□□□□□ -0.77
HDAC5-208ENST00000588419 TRBV7-1A0A0A6YYK4 115 aa10.26□□□□□ -0.77
HDAC5-208ENST00000588419 TRAV3A0A0B4J244 114 aa10.26□□□□□ -0.77
HDAC5-208ENST00000588419 MEIS3P1A6NDR6 274 aa10.26□□□□□ -0.77
HDAC5-208ENST00000588419 CGB1A6NKQ9 187 aa10.26□□□□□ -0.77
HDAC5-208ENST00000588419 A8MWP6 167 aa10.26□□□□□ -0.77
HDAC5-208ENST00000588419 PPYP01298 95 aa10.26□□□□□ -0.77
HDAC5-208ENST00000588419 CLEC3BP05452 202 aa10.26□□□□□ -0.77
HDAC5-208ENST00000588419 CLEC2LP0C7M8 214 aa10.26□□□□□ -0.77
HDAC5-208ENST00000588419 GALP22466 123 aa10.26□□□□□ -0.77
HDAC5-208ENST00000588419 CATR1Q13166 79 aa10.26□□□□□ -0.77
HDAC5-208ENST00000588419 ANKRD55Q3KP44 614 aa10.26□□□□□ -0.77
HDAC5-208ENST00000588419 IDNKQ5T6J7 187 aa10.26□□□□□ -0.77
HDAC5-208ENST00000588419 PLET1Q6UQ28 207 aa10.26□□□□□ -0.77
HDAC5-208ENST00000588419 DMBX1Q8NFW5 382 aa10.26□□□□□ -0.77
HDAC5-208ENST00000588419 OR1L6Q8NGR2 347 aa10.26□□□□□ -0.77
HDAC5-208ENST00000588419 OR5H6Q8NGV6 325 aa10.26□□□□□ -0.77
HDAC5-208ENST00000588419 OR4A5Q8NH83 315 aa10.26□□□□□ -0.77
HDAC5-208ENST00000588419 CXorf58Q96LI9 332 aa10.26□□□□□ -0.77
HDAC5-208ENST00000588419 BET1LQ9NYM9 111 aa10.26□□□□□ -0.77
HDAC5-208ENST00000588419 PLECQ15149 4684 aaKnown RBP10.26□□□□□ -0.77
HDAC5-208ENST00000588419 IGHV3-21A0A0B4J1V1 117 aa10.25□□□□□ -0.77
HDAC5-208ENST00000588419 LOC100506127A0A0U1RQW1 187 aa10.25□□□□□ -0.77
HDAC5-208ENST00000588419 LY6G6CO95867 125 aa10.25□□□□□ -0.77
HDAC5-208ENST00000588419 SDC2P34741 201 aa10.25□□□□□ -0.77
HDAC5-208ENST00000588419 AADACL3Q5VUY0 350 aa10.25□□□□□ -0.77
HDAC5-208ENST00000588419 UBE2UQ5VVX9 321 aa10.25□□□□□ -0.77
HDAC5-208ENST00000588419 OVOL2Q9BRP0 275 aa10.25□□□□□ -0.77
HDAC5-208ENST00000588419 HINT2Q9BX68 163 aa10.25□□□□□ -0.77
HDAC5-208ENST00000588419 COMMD5Q9GZQ3 224 aa10.25□□□□□ -0.77
HDAC5-208ENST00000588419 RNF167Q9H6Y7 350 aa10.25□□□□□ -0.77
HDAC5-208ENST00000588419 TMEM140Q9NV12 185 aa10.25□□□□□ -0.77
HDAC5-208ENST00000588419 A0A0J9YWU9 116 aa10.24□□□□□ -0.77
HDAC5-208ENST00000588419 OR2T8A6NH00 312 aa10.24□□□□□ -0.77
HDAC5-208ENST00000588419 S1PR2O95136 353 aa10.24□□□□□ -0.77
HDAC5-208ENST00000588419 NQO2P16083 231 aa10.24□□□□□ -0.77
HDAC5-208ENST00000588419 FGF9P31371 208 aaPredicted RBP10.24□□□□□ -0.77
HDAC5-208ENST00000588419 OR2B8PP59922 312 aa10.24□□□□□ -0.77
HDAC5-208ENST00000588419 HERV-K104P61576 105 aa10.24□□□□□ -0.77
HDAC5-208ENST00000588419 DEFB135Q30KP9 77 aa10.24□□□□□ -0.77
HDAC5-208ENST00000588419 TPRA1Q86W33 373 aa10.24□□□□□ -0.77
HDAC5-208ENST00000588419 SPARTQ8N0X7 666 aa10.24□□□□□ -0.77
HDAC5-208ENST00000588419 UBAC2Q8NBM4 344 aa10.24□□□□□ -0.77
HDAC5-208ENST00000588419 OR10W1Q8NGF6 305 aa10.24□□□□□ -0.77
HDAC5-208ENST00000588419 SLC25A38Q96DW6 304 aa10.24□□□□□ -0.77
HDAC5-208ENST00000588419 AIFM2Q9BRQ8 373 aa10.24□□□□□ -0.77
HDAC5-208ENST00000588419 THYN1Q9P016 225 aa10.24□□□□□ -0.77
HDAC5-208ENST00000588419 RAB26Q9ULW5 256 aa10.24□□□□□ -0.77
HDAC5-208ENST00000588419 UFC1Q9Y3C8 167 aa10.24□□□□□ -0.77
HDAC5-208ENST00000588419 IGHV3OR16-8A0A075B7F1 116 aa10.23□□□□□ -0.77
HDAC5-208ENST00000588419 IGLC7A0M8Q6 106 aa10.23□□□□□ -0.77
HDAC5-208ENST00000588419 UPK2O00526 184 aa10.23□□□□□ -0.77
HDAC5-208ENST00000588419 ZNF207O43670 478 aaKnown RBP10.23□□□□□ -0.77
HDAC5-208ENST00000588419 HPRT1P00492 218 aa10.23□□□□□ -0.77
HDAC5-208ENST00000588419 TAS2R31P59538 309 aa10.23□□□□□ -0.77
HDAC5-208ENST00000588419 ERVK-16P61578 105 aa10.23□□□□□ -0.77
HDAC5-208ENST00000588419 SLC25A24Q6NUK1 477 aa10.23□□□□□ -0.77
HDAC5-208ENST00000588419 ZNF818PQ6ZRF7 136 aa10.23□□□□□ -0.77
HDAC5-208ENST00000588419 HOGA1Q86XE5 327 aa10.23□□□□□ -0.77
HDAC5-208ENST00000588419 SLC38A6Q8IZM9 456 aa10.23□□□□□ -0.77
HDAC5-208ENST00000588419 ZNF502Q8TBZ5 544 aa10.23□□□□□ -0.77
HDAC5-208ENST00000588419 LINC00476Q8WZB0 136 aa10.23□□□□□ -0.77
HDAC5-208ENST00000588419 FCGR1BQ92637 280 aa10.23□□□□□ -0.77
HDAC5-208ENST00000588419 MARC2Q969Z3 335 aa10.23□□□□□ -0.77
HDAC5-208ENST00000588419 C20orf24Q9BUV8 137 aa10.23□□□□□ -0.77
HDAC5-208ENST00000588419 QTRT1Q9BXR0 403 aaKnown RBP10.23□□□□□ -0.77
HDAC5-208ENST00000588419 IFT46Q9NQC8 304 aa10.23□□□□□ -0.77
HDAC5-208ENST00000588419 MRPL27Q9P0M9 148 aaKnown RBP10.23□□□□□ -0.77
HDAC5-208ENST00000588419 TGOLN2O43493 480 aa10.22□□□□□ -0.77
HDAC5-208ENST00000588419 RLN1P04808 185 aa10.22□□□□□ -0.77
HDAC5-208ENST00000588419 RPL35AP18077 110 aaKnown RBP10.22□□□□□ -0.77
HDAC5-208ENST00000588419 APOC4P55056 127 aa10.22□□□□□ -0.77
HDAC5-208ENST00000588419 OR2C3Q8N628 320 aa10.22□□□□□ -0.77
HDAC5-208ENST00000588419 ZBTB34Q8NCN2 500 aa10.22□□□□□ -0.77
HDAC5-208ENST00000588419 EHFQ9NZC4 300 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms