RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 MSMBP08118 114 aa1.16□□□□□ -2.22
PPP4R1-227ENST00000583988 TCL1AP56279 114 aa1.16□□□□□ -2.22
PPP4R1-227ENST00000583988 POLR2GP62487 172 aaKnown RBP eCLIP1.16□□□□□ -2.22
PPP4R1-227ENST00000583988 SLC38A11Q08AI6 406 aa1.16□□□□□ -2.22
PPP4R1-227ENST00000583988 HIST3H3Q16695 136 aa1.16□□□□□ -2.22
PPP4R1-227ENST00000583988 RGS21Q2M5E4 152 aa1.16□□□□□ -2.22
PPP4R1-227ENST00000583988 ACSM3Q53FZ2 586 aa1.16□□□□□ -2.22
PPP4R1-227ENST00000583988 HIST2H3PS2Q5TEC6 136 aa1.16□□□□□ -2.22
PPP4R1-227ENST00000583988 DCXRQ7Z4W1 244 aa1.16□□□□□ -2.22
PPP4R1-227ENST00000583988 TBC1D19Q8N5T2 526 aa1.16□□□□□ -2.22
PPP4R1-227ENST00000583988 OR51T1Q8NGJ9 327 aa1.16□□□□□ -2.22
PPP4R1-227ENST00000583988 ROPN1LQ96C74 230 aa1.16□□□□□ -2.22
PPP4R1-227ENST00000583988 TTTY13Q9BZ97 58 aa1.16□□□□□ -2.22
PPP4R1-227ENST00000583988 RSL24D1Q9UHA3 163 aaKnown RBP1.16□□□□□ -2.22
PPP4R1-227ENST00000583988 ANAPC10Q9UM13 185 aa1.16□□□□□ -2.22
PPP4R1-227ENST00000583988 PXMP4Q9Y6I8 212 aa1.16□□□□□ -2.22
PPP4R1-227ENST00000583988 ADCY9O60503 1353 aa1.16□□□□□ -2.22
PPP4R1-227ENST00000583988 MALRD1Q5VYJ5 2156 aa1.15□□□□□ -2.22
PPP4R1-227ENST00000583988 TRAV7A0A075B6U4 112 aa1.15□□□□□ -2.23
PPP4R1-227ENST00000583988 HMSDA8MTL9 139 aa1.15□□□□□ -2.23
PPP4R1-227ENST00000583988 H7C2G1 150 aa1.15□□□□□ -2.23
PPP4R1-227ENST00000583988 PGLYRP1O75594 196 aaPredicted RBP1.15□□□□□ -2.23
PPP4R1-227ENST00000583988 REG1AP05451 166 aa1.15□□□□□ -2.23
PPP4R1-227ENST00000583988 LGALS1P09382 135 aaKnown RBP1.15□□□□□ -2.23
PPP4R1-227ENST00000583988 KCNE1P15382 129 aa1.15□□□□□ -2.23
PPP4R1-227ENST00000583988 SULT1A1P50225 295 aa1.15□□□□□ -2.23
PPP4R1-227ENST00000583988 RAB5BP61020 215 aa1.15□□□□□ -2.23
PPP4R1-227ENST00000583988 ITGB3BPQ13352 177 aaPredicted RBP1.15□□□□□ -2.23
PPP4R1-227ENST00000583988 IMPG1Q17R60 797 aa1.15□□□□□ -2.23
PPP4R1-227ENST00000583988 C1orf194Q5T5A4 169 aa1.15□□□□□ -2.23
PPP4R1-227ENST00000583988 GLT8D1Q68CQ7 371 aa1.15□□□□□ -2.23
PPP4R1-227ENST00000583988 ZNF550Q7Z398 422 aa1.15□□□□□ -2.23
PPP4R1-227ENST00000583988 MBD3L1Q8WWY6 194 aa1.15□□□□□ -2.23
PPP4R1-227ENST00000583988 PPP1R14BQ96C90 147 aa1.15□□□□□ -2.23
PPP4R1-227ENST00000583988 IMP4Q96G21 291 aaKnown RBP1.15□□□□□ -2.23
PPP4R1-227ENST00000583988 HSPB9Q9BQS6 159 aa1.15□□□□□ -2.23
PPP4R1-227ENST00000583988 CXorf21Q9HAI6 301 aa1.15□□□□□ -2.23
PPP4R1-227ENST00000583988 PRELID1Q9Y255 219 aa1.15□□□□□ -2.23
PPP4R1-227ENST00000583988 ANGPT4Q9Y264 503 aa1.15□□□□□ -2.23
PPP4R1-227ENST00000583988 RBM7Q9Y580 266 aaKnown RBP1.15□□□□□ -2.23
PPP4R1-227ENST00000583988 SCAF11Q99590 1463 aaKnown RBP1.15□□□□□ -2.23
PPP4R1-227ENST00000583988 NUMA1Q14980 2115 aa1.15□□□□□ -2.23
PPP4R1-227ENST00000583988 GREB1Q4ZG55 1949 aa1.15□□□□□ -2.23
PPP4R1-227ENST00000583988 MYO3BQ8WXR4 1341 aa1.15□□□□□ -2.23
PPP4R1-227ENST00000583988 FLT4P35916 1363 aa1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 CIAO1O76071 339 aa1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 RPP14O95059 124 aaKnown RBP1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 IFNA16P05015 189 aa1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 S100A6P06703 90 aa1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 OR5G3P0C626 314 aa1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 HIST1H1EP10412 219 aaKnown RBP1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 CD79AP11912 226 aa1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 GPX2P18283 190 aa1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 MAP2K4P45985 399 aa1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 OMPP47874 163 aa1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 RAB13P51153 203 aa1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 SPCS3P61009 180 aa1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 RPL30P62888 115 aaKnown RBP1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 SAPCD1Q5SSQ6 148 aa1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 C9orf64Q5T6V5 341 aa1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 C8orf74Q6P047 294 aa1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 ZNF705AQ6ZN79 300 aaPredicted RBP1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 UMODL1-AS1Q8N2C9 162 aa1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 TMEM86AQ8N2M4 240 aa1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 DEFB125Q8N687 156 aa1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 CCDC42Q96M95 316 aa1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 OR52E6Q96RD3 313 aa1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 IMMP2LQ96T52 175 aa1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 RETNLBQ9BQ08 111 aa1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 CHST6Q9GZX3 395 aa1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 OR51I1Q9H343 314 aa1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 CST9LQ9H4G1 147 aa1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 MED9Q9NWA0 146 aa1.14□□□□□ -2.23
PPP4R1-227ENST00000583988 SNAPC4Q5SXM2 1469 aa1.13□□□□□ -2.23
PPP4R1-227ENST00000583988 TRAV38-1A0A0B4J264 116 aa1.13□□□□□ -2.23
PPP4R1-227ENST00000583988 TMEM269A0A1B0GVZ9 245 aa1.13□□□□□ -2.23
PPP4R1-227ENST00000583988 EVPLLA8MZ36 301 aa1.13□□□□□ -2.23
PPP4R1-227ENST00000583988 PSMD12O00232 456 aaPredicted RBP1.13□□□□□ -2.23
PPP4R1-227ENST00000583988 MRPS14O60783 128 aaKnown RBP1.13□□□□□ -2.23
PPP4R1-227ENST00000583988 NOS1APO75052 506 aaPredicted RBP1.13□□□□□ -2.23
PPP4R1-227ENST00000583988 ZNF737O75373 536 aa1.13□□□□□ -2.23
PPP4R1-227ENST00000583988 CCR2P41597 374 aa1.13□□□□□ -2.23
PPP4R1-227ENST00000583988 CSN1S1P47710 185 aa1.13□□□□□ -2.23
PPP4R1-227ENST00000583988 REG1BP48304 166 aa1.13□□□□□ -2.23
PPP4R1-227ENST00000583988 RAB14P61106 215 aa1.13□□□□□ -2.23
PPP4R1-227ENST00000583988 PSME3P61289 254 aa1.13□□□□□ -2.23
PPP4R1-227ENST00000583988 OR2F1Q13607 317 aa1.13□□□□□ -2.23
PPP4R1-227ENST00000583988 GRK1Q15835 563 aa1.13□□□□□ -2.23
PPP4R1-227ENST00000583988 NNATQ16517 81 aa1.13□□□□□ -2.23
PPP4R1-227ENST00000583988 SPOPLQ6IQ16 392 aa1.13□□□□□ -2.23
PPP4R1-227ENST00000583988 UNQ6190/PRO20217Q6UXQ8 127 aa1.13□□□□□ -2.23
PPP4R1-227ENST00000583988 RPS19BP1Q86WX3 136 aaKnown RBP1.13□□□□□ -2.23
PPP4R1-227ENST00000583988 TRAPPC5Q8IUR0 188 aa1.13□□□□□ -2.23
PPP4R1-227ENST00000583988 RPP25LQ8N5L8 163 aaKnown RBP1.13□□□□□ -2.23
PPP4R1-227ENST00000583988 OR8J2Q8NGG1 315 aa1.13□□□□□ -2.23
PPP4R1-227ENST00000583988 CNBD2Q96M20 576 aa1.13□□□□□ -2.23
PPP4R1-227ENST00000583988 XPNPEP1Q9NQW7 623 aa1.13□□□□□ -2.23
PPP4R1-227ENST00000583988 V9GYY5 206 aaPredicted RBP1.13□□□□□ -2.23
PPP4R1-227ENST00000583988 STRCQ7RTU9 1775 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms