RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 TM4SF18Q96CE8 201 aa3.11□□□□□ -1.91
NUP88-213ENST00000576862 MS4A6EQ96DS6 147 aa3.11□□□□□ -1.91
NUP88-213ENST00000576862 PIK3IP1Q96FE7 263 aa3.11□□□□□ -1.91
NUP88-213ENST00000576862 C14orf144Q96I85 54 aa3.11□□□□□ -1.91
NUP88-213ENST00000576862 HIST1H4GQ99525 98 aa3.11□□□□□ -1.91
NUP88-213ENST00000576862 GPER1Q99527 375 aa3.11□□□□□ -1.91
NUP88-213ENST00000576862 PITX2Q99697 317 aa3.11□□□□□ -1.91
NUP88-213ENST00000576862 HSPB9Q9BQS6 159 aa3.11□□□□□ -1.91
NUP88-213ENST00000576862 MARVELD1Q9BSK0 173 aa3.11□□□□□ -1.91
NUP88-213ENST00000576862 CCDC32Q9BV29 185 aa3.11□□□□□ -1.91
NUP88-213ENST00000576862 MAP1LC3BQ9GZQ8 125 aa3.11□□□□□ -1.91
NUP88-213ENST00000576862 C20orf85Q9H1P6 137 aa3.11□□□□□ -1.91
NUP88-213ENST00000576862 SRMSQ9H3Y6 488 aa3.11□□□□□ -1.91
NUP88-213ENST00000576862 METTL17Q9H7H0 456 aaPredicted RBP3.11□□□□□ -1.91
NUP88-213ENST00000576862 IDI2-AS1Q9NZ38 188 aa3.11□□□□□ -1.91
NUP88-213ENST00000576862 ANXA10Q9UJ72 324 aa3.11□□□□□ -1.91
NUP88-213ENST00000576862 V9GY05 133 aa3.11□□□□□ -1.91
NUP88-213ENST00000576862 MYOFQ9NZM1 2061 aa3.11□□□□□ -1.91
NUP88-213ENST00000576862 SZT2Q5T011 3432 aa3.11□□□□□ -1.91
NUP88-213ENST00000576862 PLXNA2O75051 1894 aa3.11□□□□□ -1.91
NUP88-213ENST00000576862 TTC28Q96AY4 2481 aa3.11□□□□□ -1.91
NUP88-213ENST00000576862 C2orf16Q68DN1 1984 aa3.11□□□□□ -1.91
NUP88-213ENST00000576862 SCN8AQ9UQD0 1980 aa3.11□□□□□ -1.91
NUP88-213ENST00000576862 KIAA1549LQ6ZVL6 1849 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 ZNF106Q9H2Y7 1883 aaKnown RBP3.1□□□□□ -1.91
NUP88-213ENST00000576862 IGHV1OR21-1A0A087WYE8 117 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 A0A1W2PRE2 83 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 EVPLLA8MZ36 301 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 UPK1AO00322 258 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 TNFSF13O75888 250 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 AIFM1O95831 613 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 SLC35G6P0C7Q6 338 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 GKN3PP0CG01 181 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 PGA5P0DJD9 388 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 CMPK1P30085 196 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 SSR2P43308 183 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 PPICP45877 212 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 LGALS7P47929 136 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 RBP2P50120 134 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 GPM6AP51674 278 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 PIGPP57054 158 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 TAS2R19P59542 299 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 RUNX1Q01196 453 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 IFITM2Q01629 132 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 EMX1Q04741 257 aaPredicted RBP3.1□□□□□ -1.91
NUP88-213ENST00000576862 RGNQ15493 299 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 IAH1Q2TAA2 248 aaPredicted RBP3.1□□□□□ -1.91
NUP88-213ENST00000576862 CEACAM16Q2WEN9 425 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 CDNFQ49AH0 187 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 AKR1C8PQ5T2L2 129 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 C6orf52Q5T4I8 152 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 AVPI1Q5T686 147 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 OR2T5Q6IEZ7 315 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 OR10K2Q6IF99 312 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 RAB43Q86YS6 212 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 RDH10Q8IZV5 341 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 CBR4Q8N4T8 237 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 OR51G1Q8NGK1 321 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 OR2T29Q8NH02 315 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 ZFP90Q8TF47 636 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 CYGBQ8WWM9 190 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 MAL2Q969L2 176 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 TMEM230Q96A57 120 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 DIRAS2Q96HU8 199 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 PGLYRP3Q96LB9 341 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 CNBD2Q96M20 576 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 OR2A5Q96R48 311 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 FAAP24Q9BTP7 215 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 SUCNR1Q9BXA5 334 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 TMEM126AQ9H061 195 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 SH3BGRL3Q9H299 93 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 CYTL1Q9NRR1 136 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 GLS2Q9UI32 602 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 PSG8Q9UQ74 426 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 ZNF257Q9Y2Q1 563 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 KCNE3Q9Y6H6 103 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 DENND4CQ5VZ89 1909 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 GPR179Q6PRD1 2367 aa3.1□□□□□ -1.91
NUP88-213ENST00000576862 DENND4AQ7Z401 1863 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 GBF1Q92538 1859 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 ANKRD36A6QL64 1941 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 IGKV2D-24A0A075B6R9 120 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 TRAV8-4A0A0B4J246 113 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 A0A0J9YY10 115 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 A0A1B0GVG6 124 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 ZNF860A6NHJ4 632 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 H0YGG7 62 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 TMX2-CTNND1H3BSU7 103 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 FAAHO00519 579 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 ZNF324O75467 553 aaPredicted RBP3.09□□□□□ -1.91
NUP88-213ENST00000576862 ZNF682O95780 498 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 PTTG1O95997 202 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 PTHP01270 115 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 P01737 135 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 IGHG2P01859 326 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 APOA2P02652 100 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 DBIP07108 87 aaKnown RBP3.09□□□□□ -1.91
NUP88-213ENST00000576862 PGA4P0DJD7 388 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 PGA3P0DJD8 388 aa3.09□□□□□ -1.91
NUP88-213ENST00000576862 ESDP10768 282 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms