RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 ZFP57Q9NU63 452 aa11.38□□□□□ -0.59
COMMD4-225ENST00000569245 IGKV1-39P01597 117 aa11.37□□□□□ -0.59
COMMD4-225ENST00000569245 IGKV1D-39P04432 117 aa11.37□□□□□ -0.59
COMMD4-225ENST00000569245 PLGLAQ15195 96 aa11.37□□□□□ -0.59
COMMD4-225ENST00000569245 RTL8BQ17RB0 113 aa11.37□□□□□ -0.59
COMMD4-225ENST00000569245 OXLD1Q5BKU9 147 aa11.37□□□□□ -0.59
COMMD4-225ENST00000569245 OR2B11Q5JQS5 317 aa11.37□□□□□ -0.59
COMMD4-225ENST00000569245 SAMD5Q5TGI4 173 aa11.37□□□□□ -0.59
COMMD4-225ENST00000569245 TMEM268Q5VZI3 342 aa11.37□□□□□ -0.59
COMMD4-225ENST00000569245 LIN54Q6MZP7 749 aa11.37□□□□□ -0.59
COMMD4-225ENST00000569245 PDPNQ86YL7 162 aa11.37□□□□□ -0.59
COMMD4-225ENST00000569245 UXS1Q8NBZ7 420 aa11.37□□□□□ -0.59
COMMD4-225ENST00000569245 WASHC3Q9Y3C0 194 aa11.37□□□□□ -0.59
COMMD4-225ENST00000569245 ATG12O94817 140 aa11.36□□□□□ -0.59
COMMD4-225ENST00000569245 S1PR2O95136 353 aa11.36□□□□□ -0.59
COMMD4-225ENST00000569245 C5orf64Q2M2E5 130 aa11.36□□□□□ -0.59
COMMD4-225ENST00000569245 TMEM177Q53S58 311 aa11.36□□□□□ -0.59
COMMD4-225ENST00000569245 CXorf66Q5JRM2 361 aaPredicted RBP11.36□□□□□ -0.59
COMMD4-225ENST00000569245 SLC35G3Q8N808 338 aa11.36□□□□□ -0.59
COMMD4-225ENST00000569245 KLHL30-AS1Q8NEE0 82 aa11.36□□□□□ -0.59
COMMD4-225ENST00000569245 OR11H7Q8NGC8 314 aa11.36□□□□□ -0.59
COMMD4-225ENST00000569245 OR5M8Q8NGP6 311 aa11.36□□□□□ -0.59
COMMD4-225ENST00000569245 PARP11Q9NR21 331 aa11.36□□□□□ -0.59
COMMD4-225ENST00000569245 COMMD9Q9P000 198 aa11.36□□□□□ -0.59
COMMD4-225ENST00000569245 TMED3Q9Y3Q3 217 aa11.36□□□□□ -0.59
COMMD4-225ENST00000569245 WSB1Q9Y6I7 421 aa11.36□□□□□ -0.59
COMMD4-225ENST00000569245 CRYZL1O95825 349 aa11.35□□□□□ -0.59
COMMD4-225ENST00000569245 HLA-DRB1P01911 266 aa11.35□□□□□ -0.59
COMMD4-225ENST00000569245 IGF1P05019 195 aa11.35□□□□□ -0.59
COMMD4-225ENST00000569245 RPLP1P05386 114 aaKnown RBP11.35□□□□□ -0.59
COMMD4-225ENST00000569245 IGLL1P15814 213 aa11.35□□□□□ -0.59
COMMD4-225ENST00000569245 CXCL3P19876 107 aa11.35□□□□□ -0.59
COMMD4-225ENST00000569245 FOXE3Q13461 319 aa11.35□□□□□ -0.59
COMMD4-225ENST00000569245 POU2AF1Q16633 256 aa11.35□□□□□ -0.59
COMMD4-225ENST00000569245 BEAN1Q3B7T3 259 aa11.35□□□□□ -0.59
COMMD4-225ENST00000569245 LCNL1Q6ZST4 164 aa11.35□□□□□ -0.59
COMMD4-225ENST00000569245 C18orf65Q6ZTR6 163 aa11.35□□□□□ -0.59
COMMD4-225ENST00000569245 C8orf86Q6ZUL3 223 aa11.35□□□□□ -0.59
COMMD4-225ENST00000569245 LYZL2Q7Z4W2 148 aa11.35□□□□□ -0.59
COMMD4-225ENST00000569245 WFDC9Q8NEX5 89 aa11.35□□□□□ -0.59
COMMD4-225ENST00000569245 NPBQ8NG41 125 aa11.35□□□□□ -0.59
COMMD4-225ENST00000569245 OSR1Q8TAX0 266 aaPredicted RBP11.35□□□□□ -0.59
COMMD4-225ENST00000569245 LSM10Q969L4 123 aaKnown RBP11.35□□□□□ -0.59
COMMD4-225ENST00000569245 FLYWCH2Q96CP2 140 aaKnown RBP11.35□□□□□ -0.59
COMMD4-225ENST00000569245 SEC22AQ96IW7 307 aa11.35□□□□□ -0.59
COMMD4-225ENST00000569245 MGAT4CQ9UBM8 478 aa11.35□□□□□ -0.59
COMMD4-225ENST00000569245 GOSR2O14653 212 aa11.34□□□□□ -0.59
COMMD4-225ENST00000569245 ADAP1O75689 374 aa11.34□□□□□ -0.59
COMMD4-225ENST00000569245 HRASP01112 189 aa11.34□□□□□ -0.59
COMMD4-225ENST00000569245 IFNA21P01568 189 aa11.34□□□□□ -0.59
COMMD4-225ENST00000569245 IGKV1-5P01602 117 aa11.34□□□□□ -0.59
COMMD4-225ENST00000569245 PRB2P02812 416 aaPredicted RBP11.34□□□□□ -0.59
COMMD4-225ENST00000569245 IGKV1-16P04430 117 aa11.34□□□□□ -0.59
COMMD4-225ENST00000569245 HOXB5P09067 269 aa11.34□□□□□ -0.59
COMMD4-225ENST00000569245 P0C879 139 aa11.34□□□□□ -0.59
COMMD4-225ENST00000569245 NQO2P16083 231 aa11.34□□□□□ -0.59
COMMD4-225ENST00000569245 NMSQ5H8A3 153 aa11.34□□□□□ -0.59
COMMD4-225ENST00000569245 GGNBP1Q5YKI7 109 aa11.34□□□□□ -0.59
COMMD4-225ENST00000569245 TMEM65Q6PI78 240 aa11.34□□□□□ -0.59
COMMD4-225ENST00000569245 FAM219AQ8IW50 185 aa11.34□□□□□ -0.59
COMMD4-225ENST00000569245 ABHD5Q8WTS1 349 aa11.34□□□□□ -0.59
COMMD4-225ENST00000569245 ASB13Q8WXK3 278 aa11.34□□□□□ -0.59
COMMD4-225ENST00000569245 RNF5Q99942 180 aa11.34□□□□□ -0.59
COMMD4-225ENST00000569245 AIFM2Q9BRQ8 373 aa11.34□□□□□ -0.59
COMMD4-225ENST00000569245 FBXL15Q9H469 300 aa11.34□□□□□ -0.59
COMMD4-225ENST00000569245 NOTCH3Q9UM47 2321 aa11.34□□□□□ -0.59
COMMD4-225ENST00000569245 IGHV7-81A0A0B4J1V7 117 aa11.33□□□□□ -0.6
COMMD4-225ENST00000569245 G3V318 75 aa11.33□□□□□ -0.6
COMMD4-225ENST00000569245 RRHO14718 337 aa11.33□□□□□ -0.6
COMMD4-225ENST00000569245 ATP6V0E1O15342 81 aa11.33□□□□□ -0.6
COMMD4-225ENST00000569245 OR2A4O95047 310 aa11.33□□□□□ -0.6
COMMD4-225ENST00000569245 NDUFA3O95167 84 aa11.33□□□□□ -0.6
COMMD4-225ENST00000569245 ELANEP08246 267 aa11.33□□□□□ -0.6
COMMD4-225ENST00000569245 RPS16P62249 146 aaKnown RBP11.33□□□□□ -0.6
COMMD4-225ENST00000569245 GSG1LQ6UXU4 331 aa11.33□□□□□ -0.6
COMMD4-225ENST00000569245 RRNAD1Q96FB5 475 aaKnown RBP11.33□□□□□ -0.6
COMMD4-225ENST00000569245 OR2A7Q96R45 310 aa11.33□□□□□ -0.6
COMMD4-225ENST00000569245 CLCC1Q96S66 551 aa11.33□□□□□ -0.6
COMMD4-225ENST00000569245 TSNAXQ99598 290 aaKnown RBP11.33□□□□□ -0.6
COMMD4-225ENST00000569245 ZNF436Q9C0F3 470 aaPredicted RBP11.33□□□□□ -0.6
COMMD4-225ENST00000569245 METTL1Q9UBP6 276 aaKnown RBP11.33□□□□□ -0.6
COMMD4-225ENST00000569245 TRAV41A0A0B4J266 112 aa11.32□□□□□ -0.6
COMMD4-225ENST00000569245 MARCH11A6NNE9 402 aa11.32□□□□□ -0.6
COMMD4-225ENST00000569245 CCSO14618 274 aa11.32□□□□□ -0.6
COMMD4-225ENST00000569245 SHOXO15266 292 aa11.32□□□□□ -0.6
COMMD4-225ENST00000569245 KRASP01116 189 aa11.32□□□□□ -0.6
COMMD4-225ENST00000569245 IGHG4P01861 327 aa11.32□□□□□ -0.6
COMMD4-225ENST00000569245 SLC25A6P12236 298 aa11.32□□□□□ -0.6
COMMD4-225ENST00000569245 G6PCP35575 357 aa11.32□□□□□ -0.6
COMMD4-225ENST00000569245 MYCNOSP40205 109 aa11.32□□□□□ -0.6
COMMD4-225ENST00000569245 LGALS7P47929 136 aa11.32□□□□□ -0.6
COMMD4-225ENST00000569245 AKR1C2P52895 323 aa11.32□□□□□ -0.6
COMMD4-225ENST00000569245 H2BFSP57053 126 aa11.32□□□□□ -0.6
COMMD4-225ENST00000569245 ERVK-16P61578 105 aa11.32□□□□□ -0.6
COMMD4-225ENST00000569245 CFHR3Q02985 330 aa11.32□□□□□ -0.6
COMMD4-225ENST00000569245 KPRPQ5T749 579 aaPredicted RBP11.32□□□□□ -0.6
COMMD4-225ENST00000569245 MRPL41Q8IXM3 137 aaKnown RBP11.32□□□□□ -0.6
COMMD4-225ENST00000569245 RCC1LQ96I51 464 aaKnown RBP11.32□□□□□ -0.6
COMMD4-225ENST00000569245 OR10C1Q96KK4 312 aa11.32□□□□□ -0.6
COMMD4-225ENST00000569245 DUX3Q96PT4 197 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms