RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 ARL6IP1Q15041 203 aa11.57□□□□□ -0.56
NME3-211ENST00000568561 TIMM50Q3ZCQ8 353 aa11.57□□□□□ -0.56
NME3-211ENST00000568561 ZNF585BQ52M93 769 aa11.57□□□□□ -0.56
NME3-211ENST00000568561 OR4A47Q6IF82 309 aa11.57□□□□□ -0.56
NME3-211ENST00000568561 SECTM1Q8WVN6 248 aa11.57□□□□□ -0.56
NME3-211ENST00000568561 YTHDF1Q9BYJ9 559 aaKnown RBP11.57□□□□□ -0.56
NME3-211ENST00000568561 DCSTAMPQ9H295 470 aa11.57□□□□□ -0.56
NME3-211ENST00000568561 CCL28Q9NRJ3 127 aa11.57□□□□□ -0.56
NME3-211ENST00000568561 UBQLN2Q9UHD9 624 aa11.57□□□□□ -0.56
NME3-211ENST00000568561 ANXA10Q9UJ72 324 aa11.57□□□□□ -0.56
NME3-211ENST00000568561 KMT2AQ03164 3969 aa11.57□□□□□ -0.56
NME3-211ENST00000568561 TRAV3A0A0B4J244 114 aa11.56□□□□□ -0.56
NME3-211ENST00000568561 DEFB135Q30KP9 77 aa11.56□□□□□ -0.56
NME3-211ENST00000568561 RBPMS2Q6ZRY4 209 aaKnown RBP11.56□□□□□ -0.56
NME3-211ENST00000568561 OR1L6Q8NGR2 347 aa11.56□□□□□ -0.56
NME3-211ENST00000568561 LGALS14Q8TCE9 139 aa11.56□□□□□ -0.56
NME3-211ENST00000568561 HRASLSQ9HDD0 168 aa11.56□□□□□ -0.56
NME3-211ENST00000568561 HRASP01112 189 aa11.55□□□□□ -0.56
NME3-211ENST00000568561 FCER2P06734 321 aa11.55□□□□□ -0.56
NME3-211ENST00000568561 HIST1H1BP16401 226 aaKnown RBP11.55□□□□□ -0.56
NME3-211ENST00000568561 OR2B8PP59922 312 aa11.55□□□□□ -0.56
NME3-211ENST00000568561 ZNF66Q6ZN08 573 aa11.55□□□□□ -0.56
NME3-211ENST00000568561 LYG2Q86SG7 212 aa11.55□□□□□ -0.56
NME3-211ENST00000568561 SPAG16Q8N0X2 631 aa11.55□□□□□ -0.56
NME3-211ENST00000568561 ZNF502Q8TBZ5 544 aa11.55□□□□□ -0.56
NME3-211ENST00000568561 DAPK2Q9UIK4 370 aa11.55□□□□□ -0.56
NME3-211ENST00000568561 TRBV7-1A0A0A6YYK4 115 aa11.54□□□□□ -0.56
NME3-211ENST00000568561 IGLC7A0M8Q6 106 aa11.54□□□□□ -0.56
NME3-211ENST00000568561 NOTOA8MTQ0 251 aa11.54□□□□□ -0.56
NME3-211ENST00000568561 SULT1C2O00338 296 aa11.54□□□□□ -0.56
NME3-211ENST00000568561 RPA2P15927 270 aa11.54□□□□□ -0.56
NME3-211ENST00000568561 FCGR2CP31995 323 aa11.54□□□□□ -0.56
NME3-211ENST00000568561 ARPC4P59998 168 aa11.54□□□□□ -0.56
NME3-211ENST00000568561 KLK9Q2XQG4 91 aa11.54□□□□□ -0.56
NME3-211ENST00000568561 ANKRD55Q3KP44 614 aa11.54□□□□□ -0.56
NME3-211ENST00000568561 GVQW1Q8N7I0 195 aa11.54□□□□□ -0.56
NME3-211ENST00000568561 OR13F1Q8NGS4 319 aa11.54□□□□□ -0.56
NME3-211ENST00000568561 CXorf58Q96LI9 332 aa11.54□□□□□ -0.56
NME3-211ENST00000568561 BET1LQ9NYM9 111 aa11.54□□□□□ -0.56
NME3-211ENST00000568561 KLK9Q9UKQ9 250 aa11.54□□□□□ -0.56
NME3-211ENST00000568561 HERC2O95714 4834 aa11.53□□□□□ -0.56
NME3-211ENST00000568561 IGHV3OR16-8A0A075B7F1 116 aa11.53□□□□□ -0.56
NME3-211ENST00000568561 S1PR2O95136 353 aa11.53□□□□□ -0.56
NME3-211ENST00000568561 C8orf88P0DMB2 117 aa11.53□□□□□ -0.56
NME3-211ENST00000568561 FXYD4P59646 89 aa11.53□□□□□ -0.56
NME3-211ENST00000568561 ZNF773Q6PK81 442 aa11.53□□□□□ -0.56
NME3-211ENST00000568561 PLET1Q6UQ28 207 aa11.53□□□□□ -0.56
NME3-211ENST00000568561 OR2C3Q8N628 320 aa11.53□□□□□ -0.56
NME3-211ENST00000568561 BEST4Q8NFU0 473 aa11.53□□□□□ -0.56
NME3-211ENST00000568561 OR10W1Q8NGF6 305 aa11.53□□□□□ -0.56
NME3-211ENST00000568561 TXNL4BQ9NX01 149 aaKnown RBP11.53□□□□□ -0.56
NME3-211ENST00000568561 RHBDL2Q9NX52 303 aa11.53□□□□□ -0.56
NME3-211ENST00000568561 UFC1Q9Y3C8 167 aa11.53□□□□□ -0.56
NME3-211ENST00000568561 IGHV3-21A0A0B4J1V1 117 aa11.52□□□□□ -0.57
NME3-211ENST00000568561 TRAV25A0A0B4J276 109 aa11.52□□□□□ -0.57
NME3-211ENST00000568561 NUPR2A6NF83 97 aa11.52□□□□□ -0.57
NME3-211ENST00000568561 OR2T8A6NH00 312 aa11.52□□□□□ -0.57
NME3-211ENST00000568561 UPK2O00526 184 aa11.52□□□□□ -0.57
NME3-211ENST00000568561 SPRY2O43597 315 aa11.52□□□□□ -0.57
NME3-211ENST00000568561 ODF3L2Q3SX64 289 aa11.52□□□□□ -0.57
NME3-211ENST00000568561 KCTD21Q4G0X4 260 aa11.52□□□□□ -0.57
NME3-211ENST00000568561 RPP25LQ8N5L8 163 aaKnown RBP11.52□□□□□ -0.57
NME3-211ENST00000568561 OR51H1Q8NH63 302 aa11.52□□□□□ -0.57
NME3-211ENST00000568561 OR4A5Q8NH83 315 aa11.52□□□□□ -0.57
NME3-211ENST00000568561 TMEM190Q8WZ59 177 aa11.52□□□□□ -0.57
NME3-211ENST00000568561 MARC2Q969Z3 335 aa11.52□□□□□ -0.57
NME3-211ENST00000568561 KRTAP17-1Q9BYP8 105 aa11.52□□□□□ -0.57
NME3-211ENST00000568561 SLC5A7Q9GZV3 580 aa11.52□□□□□ -0.57
NME3-211ENST00000568561 TMEM140Q9NV12 185 aa11.52□□□□□ -0.57
NME3-211ENST00000568561 MRPL27Q9P0M9 148 aaKnown RBP11.52□□□□□ -0.57
NME3-211ENST00000568561 BLOC1S6Q9UL45 172 aa11.52□□□□□ -0.57
NME3-211ENST00000568561 TGOLN2O43493 480 aa11.51□□□□□ -0.57
NME3-211ENST00000568561 ZNF207O43670 478 aaKnown RBP11.51□□□□□ -0.57
NME3-211ENST00000568561 TNFAIP8O95379 198 aa11.51□□□□□ -0.57
NME3-211ENST00000568561 PPYP01298 95 aa11.51□□□□□ -0.57
NME3-211ENST00000568561 CLEC2LP0C7M8 214 aa11.51□□□□□ -0.57
NME3-211ENST00000568561 RPL35AP18077 110 aaKnown RBP11.51□□□□□ -0.57
NME3-211ENST00000568561 GALP22466 123 aa11.51□□□□□ -0.57
NME3-211ENST00000568561 PSMB9P28065 219 aa11.51□□□□□ -0.57
NME3-211ENST00000568561 APOC4P55056 127 aa11.51□□□□□ -0.57
NME3-211ENST00000568561 GABARAPL2P60520 117 aa11.51□□□□□ -0.57
NME3-211ENST00000568561 TNFRSF9Q07011 255 aa11.51□□□□□ -0.57
NME3-211ENST00000568561 SFXN4Q6P4A7 337 aa11.51□□□□□ -0.57
NME3-211ENST00000568561 CEMP1Q6PRD7 247 aaPredicted RBP11.51□□□□□ -0.57
NME3-211ENST00000568561 TMEM17Q86X19 198 aa11.51□□□□□ -0.57
NME3-211ENST00000568561 WFDC3Q8IUB2 231 aa11.51□□□□□ -0.57
NME3-211ENST00000568561 SLC38A6Q8IZM9 456 aa11.51□□□□□ -0.57
NME3-211ENST00000568561 OR5H6Q8NGV6 325 aa11.51□□□□□ -0.57
NME3-211ENST00000568561 SLC25A38Q96DW6 304 aa11.51□□□□□ -0.57
NME3-211ENST00000568561 SPAG8Q99932 426 aaPredicted RBP11.51□□□□□ -0.57
NME3-211ENST00000568561 ZNF436Q9C0F3 470 aaPredicted RBP11.51□□□□□ -0.57
NME3-211ENST00000568561 COMMD5Q9GZQ3 224 aa11.51□□□□□ -0.57
NME3-211ENST00000568561 C5orf66Q9H5L9 145 aa11.51□□□□□ -0.57
NME3-211ENST00000568561 TRAV18A0A075B6X5 111 aa11.5□□□□□ -0.57
NME3-211ENST00000568561 RBFOX2O43251 390 aaKnown RBP eCLIP11.5□□□□□ -0.572e-10■■□□□ 12.7
NME3-211ENST00000568561 MRPS14O60783 128 aaKnown RBP11.5□□□□□ -0.57
NME3-211ENST00000568561 SCGNO76038 276 aa11.5□□□□□ -0.57
NME3-211ENST00000568561 PTBP1P26599 531 aaKnown RBP eCLIP11.5□□□□□ -0.57
NME3-211ENST00000568561 BMI1P35226 326 aa11.5□□□□□ -0.57
NME3-211ENST00000568561 ELLP55199 621 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms