RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 ZNF443Q9Y2A4 671 aaPredicted RBP2.53□□□□□ -2
LINC00560-201ENST00000564593 SLC35A3Q9Y2D2 325 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 LSM2Q9Y333 95 aaKnown RBP2.53□□□□□ -2
LINC00560-201ENST00000564593 MED31Q9Y3C7 131 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 COL5A1P20908 1838 aaPredicted RBP2.53□□□□□ -2
LINC00560-201ENST00000564593 ATG2AQ2TAZ0 1938 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 MPDZO75970 2070 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 IGKV1-6A0A0C4DH72 117 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 A0A1B0GW15 77 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 A0A1W2PQL4 384 aaPredicted RBP2.53□□□□□ -2.01
LINC00560-201ENST00000564593 DAPL1A0PJW8 107 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 NAP1L6A6NFF2 107 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 TVP23AA6NH52 213 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 LRRN3E7EW58 273 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 MFNGO00587 321 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 PHYHO14832 338 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 CHP2O43745 196 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 IGF2P01344 180 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 IGKV1-39P01597 117 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 IGKV1D-39P04432 117 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 IFNA16P05015 189 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 CCR2P41597 374 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 GDI2P50395 445 aaKnown RBP2.53□□□□□ -2.01
LINC00560-201ENST00000564593 BLVRAP53004 296 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 UBE2G2P60604 165 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 CDK10Q15131 360 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 KCNJ8Q15842 424 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 SSX1Q16384 188 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 ARHGAP11BQ3KRB8 267 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 FBXL19-AS1Q494R0 122 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 CCSMST1Q4G0I0 132 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 CCDC58Q4VC31 144 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 TMEM215Q68D42 235 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 SMARCD3Q6STE5 483 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 PDPNQ86YL7 162 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 MORN4Q8NDC4 146 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 OR2M7Q8NG81 312 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 GPR32P1Q8NGA4 272 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 OR6N2Q8NGY6 317 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 RAB8BQ92930 207 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 TCEAL4Q96EI5 215 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 HYLS1Q96M11 299 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 TMED9Q9BVK6 235 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 CMC2Q9NRP2 79 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 TAS2R8Q9NYW2 309 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 ABRACLQ9P1F3 81 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 NXT1Q9UKK6 140 aaKnown RBP2.53□□□□□ -2.01
LINC00560-201ENST00000564593 V9GYH0 126 aa2.53□□□□□ -2.01
LINC00560-201ENST00000564593 MYO7AQ13402 2215 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 DNAH12Q6ZR08 3092 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 TNRC18O15417 2968 aaPredicted RBP2.52□□□□□ -2.01
LINC00560-201ENST00000564593 A0A087WUU8 490 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 TRAV1-2A0A0B4J238 106 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 A0A0J9YY10 115 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 TMEM72A0PK05 275 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 TMEM213A2RRL7 107 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 CPSF4LA6NMK7 179 aaKnown RBP2.52□□□□□ -2.01
LINC00560-201ENST00000564593 C16orf90A8MZG2 172 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 TOR1AO14656 332 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 FFAR1O14842 300 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 LYRM1O43325 122 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 SC5DO75845 299 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 UBL3O95164 117 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 NDUFB2O95178 105 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 LDOC1O95751 146 aaPredicted RBP2.52□□□□□ -2.01
LINC00560-201ENST00000564593 IFNA7P01567 189 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 C1QBP02746 253 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 LIPCP11150 499 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 PSKH1P11801 424 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 CPMP14384 443 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 HLA-GP17693 338 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 RPS4Y1P22090 263 aaKnown RBP2.52□□□□□ -2.01
LINC00560-201ENST00000564593 CTBP2P56545 445 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 GNG2P59768 71 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 RAB14P61106 215 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 RBX1P62877 108 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 BTN3A2P78410 334 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 STX4Q12846 297 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 MAPK14Q16539 360 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 SP6Q3SY56 376 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 UBE2NLQ5JXB2 153 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 MORN3Q6PF18 240 aaPredicted RBP2.52□□□□□ -2.01
LINC00560-201ENST00000564593 ZNF322Q6U7Q0 402 aaPredicted RBP2.52□□□□□ -2.01
LINC00560-201ENST00000564593 SPINT4Q6UDR6 99 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 C5orf46Q6UWT4 87 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 CA13Q8N1Q1 262 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 OR4E2Q8NGC2 313 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 OR5D16Q8NGK9 328 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 OR2T27Q8NH04 317 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 ORAOV1Q8WV07 137 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 SLC7A6Q92536 515 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 FGF13Q92913 245 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 MED28Q9H204 178 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 SLC38A1Q9H2H9 487 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 ABCB9Q9NP78 766 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 FBXL12Q9NXK8 326 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 BABAM2Q9NXR7 383 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 NUBP2Q9Y5Y2 271 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 SLC22A7Q9Y694 548 aa2.52□□□□□ -2.01
LINC00560-201ENST00000564593 MYO9BQ13459 2157 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms