RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	WSB1	Q9Y6I7	421 aa		3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	HRNR	Q86YZ3	2850 aa	Predicted RBP	3.13	□□□□□ -1.91
LRRC28-222	ENST00000561431	CSMD2	Q7Z408	3487 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	CSMD1	Q96PZ7	3565 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431		A0A1W2PRE2	83 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	MAP1LC3B2	A6NCE7	125 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	NKX2-6	A6NCS4	301 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	EVPLL	A8MZ36	301 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431		K7ERU9	68 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	HMGB3	O15347	200 aa	Known RBP	3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	GCM2	O75603	506 aa	Predicted RBP	3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	IGHG1	P01857	330 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	SERPINE1	P05121	402 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	CD79A	P11912	226 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	MUC1	P15941	1255 aa	Predicted RBP	3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	SLC2A5	P22732	501 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	PSMB9	P28065	219 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	SHC1	P29353	583 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	TSPO	P30536	169 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	KIR2DS2	P43631	304 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	RAP1A	P62834	184 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	EMX1	Q04741	257 aa	Predicted RBP	3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	SMAGP	Q0VAQ4	97 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	SLC10A1	Q14973	349 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	OR7A5	Q15622	319 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	ATP6AP1L	Q52LC2	224 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	CLEC12A	Q5QGZ9	265 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	FAM162B	Q5T6X4	162 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	C9orf66	Q5T8R8	295 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	OLFML2A	Q68BL7	652 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	HAGHL	Q6PII5	290 aa	Predicted RBP	3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	XKRX	Q6PP77	449 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	PLET1	Q6UQ28	207 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	UNQ9370/PRO34162	Q6UXP9	181 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	C12orf54	Q6X4T0	127 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	FA2H	Q7L5A8	372 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	OSR2	Q8N2R0	312 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	KRTCAP2	Q8N6L1	136 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	COX18	Q8N8Q8	333 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	ZNRF1	Q8ND25	227 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	OR2T33	Q8NG76	320 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	OR10G4	Q8NGN3	311 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	BORCS7	Q96B45	105 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	LRRC58	Q96CX6	371 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	AURKB	Q96GD4	344 aa	Predicted RBP	3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	DIRAS2	Q96HU8	199 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	PGLYRP3	Q96LB9	341 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	OR2M2	Q96R28	347 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	GPER1	Q99527	375 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	RSPO3	Q9BXY4	272 aa	Predicted RBP	3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	TBL1XR1	Q9BZK7	514 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	MAP1LC3B	Q9GZQ8	125 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	ESM1	Q9NQ30	184 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	TAS2R5	Q9NYW4	299 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	CALML5	Q9NZT1	146 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	GLS2	Q9UI32	602 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	RBM7	Q9Y580	266 aa	Known RBP	3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	KIAA1549	Q9HCM3	1950 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	NAV2	Q8IVL1	2488 aa		3.12	□□□□□ -1.91
LRRC28-222	ENST00000561431	ESPL1	Q14674	2120 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	ADGRG4	Q8IZF6	3080 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	SPTBN1	Q01082	2364 aa	Known RBP	3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	EML6	Q6ZMW3	1958 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	ICE1	Q9Y2F5	2266 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431		A0A087WX48	190 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	IGLV3-32	A0A0A0MS00	114 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	BORCS7-ASMT	A0A0B4J1R7	106 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	IGKV3D-20	A0A0C4DH25	116 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	NCBP2L	A6PVI3	153 aa	Known RBP	3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	KRTAP16-1	A8MUX0	517 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	SULT2B1	O00204	365 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	GGCT	O75223	188 aa	Known RBP	3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	REM1	O75628	298 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	C6orf47	O95873	294 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	IGHG2	P01859	326 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	HMGN2	P05204	90 aa	Known RBP	3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	OR8U8	P0C7N1	319 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	GKN3P	P0CG01	181 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	LAMP1	P11279	417 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	ZNF708	P17019	499 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	SLC18A1	P54219	525 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	DIO3	P55073	304 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	PIGP	P57054	158 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	RRAS2	P62070	204 aa	Predicted RBP	3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	SELENOT	P62341	195 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	SLC35A1	P78382	337 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	RUNX1	Q01196	453 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	QPRT	Q15274	297 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	HIGD2B	Q4VC39	106 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	ZNF506	Q5JVG8	444 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	ZFAND6	Q6FIF0	208 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	LAMTOR1	Q6IAA8	161 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	NANOGP8	Q6NSW7	305 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	TMPPE	Q6ZT21	453 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	MARCH3	Q86UD3	253 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	CLECL1	Q8IZS7	167 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	POM121L12	Q8N7R1	296 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	CHST4	Q8NCG5	386 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	MAPK1IP1L	Q8NDC0	245 aa		3.11	□□□□□ -1.91
LRRC28-222	ENST00000561431	OR2M3	Q8NG83	312 aa		3.11	□□□□□ -1.91

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