RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 GTF2A1LQ9UNN4 478 aa2.49□□□□□ -2.01
HERC1-211ENST00000560983 BAIAP2Q9UQB8 552 aa2.49□□□□□ -2.01
HERC1-211ENST00000560983 FAM32AQ9Y421 112 aaKnown RBP2.49□□□□□ -2.01
HERC1-211ENST00000560983 MUC17Q685J3 4493 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 IGKV3-7A0A075B6H7 116 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 IGHV3OR16-8A0A075B7F1 116 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 A0A0U1RQV1 116 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 GAGE10A6NGK3 116 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 RIIAD1A6NNX1 92 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 KNCNA6PVL3 124 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 ZNF705FA8MVS1 300 aaPredicted RBP2.48□□□□□ -2.01
HERC1-211ENST00000560983 E7EUB6 86 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 K7EMT4 169 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 AIPO00170 330 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 CHEK1O14757 476 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 GEMIN2O14893 280 aaKnown RBP2.48□□□□□ -2.01
HERC1-211ENST00000560983 RAB29O14966 203 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 ZNF207O43670 478 aaKnown RBP2.48□□□□□ -2.01
HERC1-211ENST00000560983 DFFBO76075 338 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 GADD45GO95257 159 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 ZNF705DP0CH99 300 aaPredicted RBP2.48□□□□□ -2.01
HERC1-211ENST00000560983 ZNF705BP0CI00 300 aaPredicted RBP2.48□□□□□ -2.01
HERC1-211ENST00000560983 IFNGR2P38484 337 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 CKAP4Q07065 602 aaKnown RBP2.48□□□□□ -2.01
HERC1-211ENST00000560983 IRF3Q14653 427 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 KISS1Q15726 138 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 ZSCAN26Q16670 478 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 LCE3EQ5T5B0 92 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 GGNBP1Q5YKI7 109 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 SH2D6Q7Z4S9 175 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 CEACAM19Q7Z692 300 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 CCDC54Q8NEL0 328 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 PXT1Q8NFP0 134 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 OR9Q2Q8NGE9 314 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 OR10K1Q8NGX5 313 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 OR4K15Q8NH41 348 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 THAP6Q8TBB0 222 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 FCAMRQ8WWV6 532 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 SRSF12Q8WXF0 261 aaKnown RBP2.48□□□□□ -2.01
HERC1-211ENST00000560983 ASB17Q8WXJ9 295 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 ABHD14BQ96IU4 210 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 PHB2Q99623 299 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 RHPN1-AS1Q9BWJ2 59 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 GORASP2Q9H8Y8 452 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 NEK6Q9HC98 313 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 CMTM6Q9NX76 183 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 AASSQ9UDR5 926 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 ENOPH1Q9UHY7 261 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 JPT1Q9UK76 154 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 IKZF2Q9UKS7 526 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 TRAPPC2LQ9UL33 140 aa2.48□□□□□ -2.01
HERC1-211ENST00000560983 TRBV7-1A0A0A6YYK4 115 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 TMEM189A5PLL7 270 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 LRCOL1A6NCL2 159 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 CCDC182A6NF36 153 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 MFSD2BA6NFX1 497 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 SMIM9A6NGZ8 99 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 ARPC2O15144 300 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 RS1O15537 224 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 OR7C1O76099 320 aaPredicted RBP2.47□□□□□ -2.01
HERC1-211ENST00000560983 RPP14O95059 124 aaKnown RBP2.47□□□□□ -2.01
HERC1-211ENST00000560983 CRYGCP07315 174 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 MRPL3P09001 348 aaKnown RBP2.47□□□□□ -2.01
HERC1-211ENST00000560983 HOXB5P09067 269 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 AZU1P20160 251 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 GPR183P32249 361 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 SMIM11AP58511 58 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 DSCR10P59022 87 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 TNXAQ16473 311 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 TNFAIP8L3Q5GJ75 292 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 NHLRC3Q5JS37 347 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 SLC35D3Q5M8T2 416 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 C6orf183Q5T699 404 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 GLT8D1Q68CQ7 371 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 ZNF322Q6U7Q0 402 aaPredicted RBP2.47□□□□□ -2.01
HERC1-211ENST00000560983 PLET1Q6UQ28 207 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 SCXQ7RTU7 201 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 PDPNQ86YL7 162 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 CPOQ8IVL8 374 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 STPG4Q8N801 248 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 ZNF502Q8TBZ5 544 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 EEF1AKMT3Q96AZ1 226 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 OR2A7Q96R45 310 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 PAIP2Q9BPZ3 127 aaKnown RBP2.47□□□□□ -2.01
HERC1-211ENST00000560983 KCTD14Q9BQ13 255 aaPredicted RBP2.47□□□□□ -2.01
HERC1-211ENST00000560983 TM2D1Q9BX74 207 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 ROPN1BQ9BZX4 212 aaPredicted RBP2.47□□□□□ -2.01
HERC1-211ENST00000560983 MS4A6AQ9H2W1 248 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 RAB9BQ9NP90 201 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 SLC35D1Q9NTN3 355 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 SMPD3Q9NY59 655 aaPredicted RBP2.47□□□□□ -2.01
HERC1-211ENST00000560983 XCL2Q9UBD3 114 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 ST3GAL6Q9Y274 331 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 ZNF257Q9Y2Q1 563 aa2.47□□□□□ -2.01
HERC1-211ENST00000560983 PUS1Q9Y606 427 aaKnown RBP eCLIP2.47□□□□□ -2.01
HERC1-211ENST00000560983 SYNE2Q8WXH0 6885 aaKnown RBP2.46□□□□□ -2.02
HERC1-211ENST00000560983 IGLV11-55A0A075B6I3 123 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 IGHV3-49A0A0A0MS15 119 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 IGHV7-4-1A0A0J9YVY3 117 aa2.46□□□□□ -2.02
HERC1-211ENST00000560983 TEX48A0A1B0GUV7 120 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms