RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 SLC35D1Q9NTN3 355 aa6.64□□□□□ -1.35
SMAD3-212ENST00000559937 BET1LQ9NYM9 111 aa6.64□□□□□ -1.35
SMAD3-212ENST00000559937 KAAG1Q9UBP8 84 aa6.64□□□□□ -1.35
SMAD3-212ENST00000559937 SLC25A10Q9UBX3 287 aaPredicted RBP6.64□□□□□ -1.35
SMAD3-212ENST00000559937 PPIAL4AQ9Y536 164 aa6.64□□□□□ -1.35
SMAD3-212ENST00000559937 COL6A6A6NMZ7 2263 aa6.64□□□□□ -1.35
SMAD3-212ENST00000559937 hCG_1809904A0A1W2PP81 198 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 A0A1W2PR64 198 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 A0A1W2PRV1 198 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 ZNF98A6NK75 572 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 F6UZH7 168 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 INS-IGF2F8WCM5 200 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 AP4M1O00189 453 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 PDE6DO43924 150 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 VENTXO95231 258 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 FSTL3O95633 263 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 IGHV2-5P01817 119 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 APOA2P02652 100 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 NDUFB7P17568 137 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 CCL8P80075 99 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 PRCDQ00LT1 54 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 EFNB3Q15768 340 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 TMEM241Q24JQ0 296 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 TMEM177Q53S58 311 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 SPINK9Q5DT21 86 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 ADAM5Q6NVV9 412 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 DUX4L9Q6RFH8 374 aaPredicted RBP6.63□□□□□ -1.35
SMAD3-212ENST00000559937 C1orf229Q6ZS94 237 aaPredicted RBP6.63□□□□□ -1.35
SMAD3-212ENST00000559937 ZFP82Q8N141 532 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 DEFB108BQ8NET1 73 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 SLC24A4Q8NFF2 622 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 OR5B3Q8NH48 314 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 C2CD4CQ8TF44 421 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 Q8WTZ3 238 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 GCN1Q92616 2671 aaKnown RBP6.63□□□□□ -1.35
SMAD3-212ENST00000559937 RND1Q92730 232 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 SNRNP40Q96DI7 357 aaKnown RBP6.63□□□□□ -1.35
SMAD3-212ENST00000559937 PLPPR2Q96GM1 343 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 GGTLC1Q9BX51 225 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 MS4A5Q9H3V2 200 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 SAP30LQ9HAJ7 183 aa6.63□□□□□ -1.35
SMAD3-212ENST00000559937 LSM4Q9Y4Z0 139 aaKnown RBP6.63□□□□□ -1.35
SMAD3-212ENST00000559937 TRBV24-1A0A075B6N3 115 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 TRAV3A0A0B4J244 114 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 A0A1W2PPV4 95 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 SHISA9B4DS77 424 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 RRHO14718 337 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 NDUFB3O43676 98 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 SMIM6P0DI80 62 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 CT45A6P0DMU7 189 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 CT45A5P0DMU8 189 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 CT45A7P0DMV0 189 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 RPS10P46783 165 aaKnown RBP6.62□□□□□ -1.35
SMAD3-212ENST00000559937 RPL29P47914 159 aaKnown RBP6.62□□□□□ -1.35
SMAD3-212ENST00000559937 GNG10P50151 68 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 AKR1D1P51857 326 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 ZNF137PP52743 207 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 SNRPEP62304 92 aaKnown RBP6.62□□□□□ -1.35
SMAD3-212ENST00000559937 RPL31P62899 125 aaKnown RBP6.62□□□□□ -1.35
SMAD3-212ENST00000559937 RAB31Q13636 194 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 FBXL19-AS1Q494R0 122 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 C2orf83Q53S99 150 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 LRRC10Q5BKY1 277 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 TEPPQ6URK8 271 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 OR1L8Q8NGR8 309 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 OR4A5Q8NH83 315 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 NANPQ8TBE9 248 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 RNASE6Q93091 150 aaKnown RBP6.62□□□□□ -1.35
SMAD3-212ENST00000559937 LEAP2Q969E1 77 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 ANAPC16Q96DE5 110 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 ZNF714Q96N38 554 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 MGST2Q99735 147 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 PARLQ9H300 379 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 CHODLQ9H9P2 273 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 TMEM106BQ9NUM4 274 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 OR51B2Q9Y5P1 312 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 PXMP4Q9Y6I8 212 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 ARL2-SNX15V9GYD0 113 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 ICE1Q9Y2F5 2266 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 ARFGEF3Q5TH69 2177 aa6.62□□□□□ -1.35
SMAD3-212ENST00000559937 A0A087X0M5 115 aa6.61□□□□□ -1.35
SMAD3-212ENST00000559937 TRBV23-1A0A0A0MS06 115 aa6.61□□□□□ -1.35
SMAD3-212ENST00000559937 A0A1B0GX30 115 aa6.61□□□□□ -1.35
SMAD3-212ENST00000559937 A0A1W2PPE3 182 aa6.61□□□□□ -1.35
SMAD3-212ENST00000559937 B9A039 149 aa6.61□□□□□ -1.35
SMAD3-212ENST00000559937 J3QR06 171 aa6.61□□□□□ -1.35
SMAD3-212ENST00000559937 TMPRSS2O15393 492 aa6.61□□□□□ -1.35
SMAD3-212ENST00000559937 PAGE4O60829 102 aa6.61□□□□□ -1.35
SMAD3-212ENST00000559937 MMP23AO75900 390 aa6.61□□□□□ -1.35
SMAD3-212ENST00000559937 YIF1AO95070 293 aa6.61□□□□□ -1.35
SMAD3-212ENST00000559937 CXorf1O96002 111 aa6.61□□□□□ -1.35
SMAD3-212ENST00000559937 MT-CO2P00403 227 aa6.61□□□□□ -1.35
SMAD3-212ENST00000559937 IGHV3-7P01780 117 aa6.61□□□□□ -1.35
SMAD3-212ENST00000559937 CXCL1P09341 107 aa6.61□□□□□ -1.35
SMAD3-212ENST00000559937 STAG3L2P0CL84 134 aa6.61□□□□□ -1.35
SMAD3-212ENST00000559937 STAG3L3P0CL85 134 aa6.61□□□□□ -1.35
SMAD3-212ENST00000559937 USF1P22415 310 aaPredicted RBP6.61□□□□□ -1.35
SMAD3-212ENST00000559937 APOBEC3AP31941 199 aaPredicted RBP6.61□□□□□ -1.35
SMAD3-212ENST00000559937 RPL35P42766 123 aaKnown RBP6.61□□□□□ -1.35
SMAD3-212ENST00000559937 MEOX2P50222 304 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms