RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 APOA1P02647 267 aa12.91□□□□□ -0.34
LRRC28-210ENST00000558879 SMIM18P0DKX4 95 aa12.91□□□□□ -0.34
LRRC28-210ENST00000558879 PRSS3P35030 304 aa12.91□□□□□ -0.34
LRRC28-210ENST00000558879 VBP1P61758 197 aa12.91□□□□□ -0.34
LRRC28-210ENST00000558879 AADACL3Q5VUY0 350 aa12.91□□□□□ -0.34
LRRC28-210ENST00000558879 LCN12Q6JVE5 192 aa12.91□□□□□ -0.34
LRRC28-210ENST00000558879 Q8N402 240 aa12.91□□□□□ -0.34
LRRC28-210ENST00000558879 OR2K2Q8NGT1 345 aa12.91□□□□□ -0.34
LRRC28-210ENST00000558879 OR5H2Q8NGV7 314 aa12.91□□□□□ -0.34
LRRC28-210ENST00000558879 RCHY1Q96PM5 261 aa12.91□□□□□ -0.34
LRRC28-210ENST00000558879 TMEM140Q9NV12 185 aa12.91□□□□□ -0.34
LRRC28-210ENST00000558879 FBXL7Q9UJT9 491 aa12.91□□□□□ -0.34
LRRC28-210ENST00000558879 DPPA5A6NC42 116 aa12.9□□□□□ -0.34
LRRC28-210ENST00000558879 IZUMO1RA6ND01 250 aa12.9□□□□□ -0.34
LRRC28-210ENST00000558879 PPP5D1E7EU14 171 aa12.9□□□□□ -0.34
LRRC28-210ENST00000558879 UPK2O00526 184 aa12.9□□□□□ -0.34
LRRC28-210ENST00000558879 NDUFB8O95169 186 aa12.9□□□□□ -0.34
LRRC28-210ENST00000558879 PMP2P02689 132 aa12.9□□□□□ -0.34
LRRC28-210ENST00000558879 RLN1P04808 185 aa12.9□□□□□ -0.34
LRRC28-210ENST00000558879 SRSF8Q9BRL6 282 aaKnown RBP12.9□□□□□ -0.34
LRRC28-210ENST00000558879 TM2D3Q9BRN9 247 aa12.9□□□□□ -0.34
LRRC28-210ENST00000558879 HRASLSQ9HDD0 168 aa12.9□□□□□ -0.34
LRRC28-210ENST00000558879 MARCH11A6NNE9 402 aa12.89□□□□□ -0.35
LRRC28-210ENST00000558879 LGALS9O00182 355 aa12.89□□□□□ -0.35
LRRC28-210ENST00000558879 DHFRP00374 187 aa12.89□□□□□ -0.35
LRRC28-210ENST00000558879 REG1AP05451 166 aa12.89□□□□□ -0.35
LRRC28-210ENST00000558879 HIST1H1BP16401 226 aaKnown RBP12.89□□□□□ -0.35
LRRC28-210ENST00000558879 HRH1P35367 487 aa12.89□□□□□ -0.35
LRRC28-210ENST00000558879 LYSMD2Q8IV50 215 aa12.89□□□□□ -0.35
LRRC28-210ENST00000558879 SGPP2Q8IWX5 399 aa12.89□□□□□ -0.35
LRRC28-210ENST00000558879 CADM3Q8N126 398 aa12.89□□□□□ -0.35
LRRC28-210ENST00000558879 COMMD3Q9UBI1 195 aa12.89□□□□□ -0.35
LRRC28-210ENST00000558879 A8MWP6 167 aa12.88□□□□□ -0.35
LRRC28-210ENST00000558879 GGCTO75223 188 aaKnown RBP12.88□□□□□ -0.35
LRRC28-210ENST00000558879 PGLYRP1O75594 196 aaPredicted RBP12.88□□□□□ -0.35
LRRC28-210ENST00000558879 GABARAPO95166 117 aa12.88□□□□□ -0.35
LRRC28-210ENST00000558879 F2RP25116 425 aa12.88□□□□□ -0.35
LRRC28-210ENST00000558879 THOC7Q6I9Y2 204 aaKnown RBP12.88□□□□□ -0.35
LRRC28-210ENST00000558879 SCPEP1Q9HB40 452 aa12.88□□□□□ -0.35
LRRC28-210ENST00000558879 MFSD2BA6NFX1 497 aa12.87□□□□□ -0.35
LRRC28-210ENST00000558879 C2orf70A6NJV1 201 aa12.87□□□□□ -0.35
LRRC28-210ENST00000558879 GPR31O00270 319 aa12.87□□□□□ -0.35
LRRC28-210ENST00000558879 IGHV3-23P01764 117 aa12.87□□□□□ -0.35
LRRC28-210ENST00000558879 HLA-AP01891 365 aaKnown RBP12.87□□□□□ -0.35
LRRC28-210ENST00000558879 ELK1P19419 428 aa12.87□□□□□ -0.35
LRRC28-210ENST00000558879 EDN2P20800 178 aa12.87□□□□□ -0.35
LRRC28-210ENST00000558879 ARL3P36405 182 aa12.87□□□□□ -0.35
LRRC28-210ENST00000558879 CTF1Q16619 201 aa12.87□□□□□ -0.35
LRRC28-210ENST00000558879 ZNF585BQ52M93 769 aa12.87□□□□□ -0.35
LRRC28-210ENST00000558879 GPHB5Q86YW7 130 aa12.87□□□□□ -0.35
LRRC28-210ENST00000558879 LAX1Q8IWV1 398 aa12.87□□□□□ -0.35
LRRC28-210ENST00000558879 DMBX1Q8NFW5 382 aa12.87□□□□□ -0.35
LRRC28-210ENST00000558879 OR6F1Q8NGZ6 308 aa12.87□□□□□ -0.35
LRRC28-210ENST00000558879 EEF1AKMT3Q96AZ1 226 aa12.87□□□□□ -0.35
LRRC28-210ENST00000558879 COMMD5Q9GZQ3 224 aa12.87□□□□□ -0.35
LRRC28-210ENST00000558879 NAA50Q9GZZ1 169 aaKnown RBP12.87□□□□□ -0.35
LRRC28-210ENST00000558879 ZC4H2Q9NQZ6 224 aa12.87□□□□□ -0.35
LRRC28-210ENST00000558879 S4R3C0 116 aa12.87□□□□□ -0.35
LRRC28-210ENST00000558879 NBEAL2Q6ZNJ1 2754 aa12.87□□□□□ -0.35
LRRC28-210ENST00000558879 HPGDSO60760 199 aa12.86□□□□□ -0.35
LRRC28-210ENST00000558879 HLA-DMAP28067 261 aa12.86□□□□□ -0.35
LRRC28-210ENST00000558879 RCVRNP35243 200 aa12.86□□□□□ -0.35
LRRC28-210ENST00000558879 CD300EQ496F6 205 aaPredicted RBP12.86□□□□□ -0.35
LRRC28-210ENST00000558879 CLEC19AQ6UXS0 136 aa12.86□□□□□ -0.35
LRRC28-210ENST00000558879 GTSCR1Q86UQ5 136 aa12.86□□□□□ -0.35
LRRC28-210ENST00000558879 CMTM1Q8IZ96 169 aa12.86□□□□□ -0.35
LRRC28-210ENST00000558879 FCAMRQ8WWV6 532 aa12.86□□□□□ -0.35
LRRC28-210ENST00000558879 DGCR14Q96DF8 476 aaKnown RBP12.86□□□□□ -0.35
LRRC28-210ENST00000558879 CXorf58Q96LI9 332 aa12.86□□□□□ -0.35
LRRC28-210ENST00000558879 QTRT1Q9BXR0 403 aaKnown RBP12.86□□□□□ -0.35
LRRC28-210ENST00000558879 ZMAT4Q9H898 229 aa12.86□□□□□ -0.35
LRRC28-210ENST00000558879 FAM212BQ9NTI7 297 aaPredicted RBP12.86□□□□□ -0.35
LRRC28-210ENST00000558879 TRBV7-1A0A0A6YYK4 115 aa12.85□□□□□ -0.35
LRRC28-210ENST00000558879 C3orf84H3BNL1 204 aa12.85□□□□□ -0.35
LRRC28-210ENST00000558879 OR2C1O95371 312 aa12.85□□□□□ -0.35
LRRC28-210ENST00000558879 DEFA4P12838 97 aa12.85□□□□□ -0.35
LRRC28-210ENST00000558879 ERVK-16P61578 105 aa12.85□□□□□ -0.35
LRRC28-210ENST00000558879 WT1-ASQ06250 92 aa12.85□□□□□ -0.35
LRRC28-210ENST00000558879 SNX29P2Q8IUI4 249 aa12.85□□□□□ -0.35
LRRC28-210ENST00000558879 GDPD1Q8N9F7 314 aa12.85□□□□□ -0.35
LRRC28-210ENST00000558879 OR10W1Q8NGF6 305 aa12.85□□□□□ -0.35
LRRC28-210ENST00000558879 SMIM31A0A1B0GVY4 71 aa12.84□□□□□ -0.35
LRRC28-210ENST00000558879 TMEM213A2RRL7 107 aa12.84□□□□□ -0.35
LRRC28-210ENST00000558879 ZNF785A8K8V0 405 aa12.84□□□□□ -0.35
LRRC28-210ENST00000558879 FOLR2P14207 255 aa12.84□□□□□ -0.35
LRRC28-210ENST00000558879 RPA2P15927 270 aa12.84□□□□□ -0.35
LRRC28-210ENST00000558879 LPAR6P43657 344 aa12.84□□□□□ -0.35
LRRC28-210ENST00000558879 RORCP51449 518 aa12.84□□□□□ -0.35
LRRC28-210ENST00000558879 UCP3P55916 312 aa12.84□□□□□ -0.35
LRRC28-210ENST00000558879 DEFB114Q30KQ6 69 aa12.84□□□□□ -0.35
LRRC28-210ENST00000558879 HSD17B13Q7Z5P4 300 aaPredicted RBP12.84□□□□□ -0.35
LRRC28-210ENST00000558879 ZNF502Q8TBZ5 544 aa12.84□□□□□ -0.35
LRRC28-210ENST00000558879 DYNLRB2Q8TF09 96 aa12.84□□□□□ -0.35
LRRC28-210ENST00000558879 NDUFA4L2Q9NRX3 87 aa12.84□□□□□ -0.35
LRRC28-210ENST00000558879 RYR3Q15413 4870 aa12.84□□□□□ -0.35
LRRC28-210ENST00000558879 TEX50A0A1B0GTY4 177 aa12.83□□□□□ -0.36
LRRC28-210ENST00000558879 SERPINE2P07093 398 aa12.83□□□□□ -0.36
LRRC28-210ENST00000558879 PTBP1P26599 531 aaKnown RBP eCLIP12.83□□□□□ -0.36
LRRC28-210ENST00000558879 G6PCP35575 357 aa12.83□□□□□ -0.36
LRRC28-210ENST00000558879 PHLDA2Q53GA4 152 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms