RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 VGLL3A8MV65 326 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 LOC110117498-PIK3R3F6TDL0 507 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 C3orf84H3BNL1 204 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 ARPC3O15145 178 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 PRKYO43930 277 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 ENTPD6O75354 484 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 OR2F2O95006 317 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 FSTL3O95633 263 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 OR2H2O95918 312 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 LALBAP00709 142 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 CA1P00915 261 aaPredicted RBP1.72□□□□□ -2.13
SCFD1-219ENST00000556413 CST4P01036 141 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 IGKV1D-12P01611 117 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 TTRP02766 147 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 APELAP0DMC3 54 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 ZNF3P17036 446 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 TUBG1P23258 451 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 HTR1DP28221 377 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 KIR3DL2P43630 455 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 KRTAP12-3P60328 96 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 CXCR4P61073 352 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 EWSR1Q01844 656 aaKnown RBP eCLIP1.72□□□□□ -2.13
SCFD1-219ENST00000556413 TNFRSF9Q07011 255 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 TSPAN31Q12999 210 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 GINS1Q14691 196 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 MAPRE2Q15555 327 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 CEACAM21Q3KPI0 293 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 PIGYQ3MUY2 71 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 TP53I3Q53FA7 332 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 ZNF684Q5T5D7 378 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 BCL2L15Q5TBC7 163 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 C1orf146Q5VVC0 180 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 LCN8Q6JVE9 175 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 C19orf35Q6ZS72 473 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 RASSF6Q6ZTQ3 369 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 ACOT7LQ6ZUV0 252 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 SLC35E3Q7Z769 313 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 MOB3BQ86TA1 216 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 EGFL6Q8IUX8 553 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 ZNF695Q8IW36 515 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 SLC35F2Q8IXU6 374 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 DEFB107AQ8IZN7 70 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 STPG2Q8N412 459 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 C5orf56Q8N8D9 126 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 C15orf54Q8N8G6 183 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 OR11H1Q8NG94 326 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 OR11H6Q8NGC7 330 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 OR51D1Q8NGF3 324 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 OR51A4Q8NGJ6 313 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 OR13C9Q8NGT0 318 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 OTOSQ8NHW6 89 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 PLPPR1Q8TBJ4 325 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 TEX47Q8TBZ9 253 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 MCUR1Q96AQ8 359 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 RPEQ96AT9 228 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 CREB3L1Q96BA8 519 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 MALSU1Q96EH3 234 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 ADAT3Q96EY9 351 aaPredicted RBP1.72□□□□□ -2.13
SCFD1-219ENST00000556413 COQ2Q96H96 371 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 PYURFQ96I23 114 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 CEP19Q96LK0 163 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 RBM14Q96PK6 669 aaKnown RBP1.72□□□□□ -2.13
SCFD1-219ENST00000556413 P2RX4Q99571 388 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 SH3GL1Q99961 368 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 FAM103A1Q9BTL3 118 aaKnown RBP1.72□□□□□ -2.13
SCFD1-219ENST00000556413 TMED9Q9BVK6 235 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 TMEM133Q9H2Q1 129 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 PARP11Q9NR21 331 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 TUBG2Q9NRH3 451 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 TVP23BQ9NYZ1 205 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 MRM2Q9UI43 246 aaKnown RBP1.72□□□□□ -2.13
SCFD1-219ENST00000556413 ENPP5Q9UJA9 477 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 LAMP5Q9UJQ1 280 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 SLC7A11Q9UPY5 501 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 NOP16Q9Y3C1 178 aaKnown RBP1.72□□□□□ -2.13
SCFD1-219ENST00000556413 SAMHD1Q9Y3Z3 626 aaKnown RBP1.72□□□□□ -2.13
SCFD1-219ENST00000556413 TBL2Q9Y4P3 447 aaKnown RBP1.72□□□□□ -2.13
SCFD1-219ENST00000556413 MPC1Q9Y5U8 109 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 DNAH11Q96DT5 4516 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 TENM3Q9P273 2699 aa1.72□□□□□ -2.13
SCFD1-219ENST00000556413 DNAH5Q8TE73 4624 aa1.71□□□□□ -2.13
SCFD1-219ENST00000556413 DNAH2Q9P225 4427 aa1.71□□□□□ -2.13
SCFD1-219ENST00000556413 MEIKINA0A087WXM9 373 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 TRGV10A0A0A0MS01 117 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 IGKV1-9A0A0C4DH69 117 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 hADV38S2A0JD32 116 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 ODAMA1E959 279 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 IZUMO1RA6ND01 250 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 OR5B21A6NL26 309 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 BUB1B-PAK6H3BSN5 160 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 TOR1AO14656 332 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 HSD17B6O14756 317 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 DHRS3O75911 302 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 LY6G6CO95867 125 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 IFNGP01579 166 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 TRBV12-3P01733 135 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 ALDOBP05062 364 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 RBMY1CP0DJD4 496 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 ALOX5APP20292 161 aa1.71□□□□□ -2.14
SCFD1-219ENST00000556413 SLC2A5P22732 501 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms