RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 RPL23P62829 140 aaKnown RBP4.62□□□□□ -1.67
LIMA1-203ENST00000547825 GNB1P62873 340 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 SSPNQ14714 243 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 PLPPR5Q32ZL2 321 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 LYPD6Q86Y78 171 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 LYG1Q8N1E2 194 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 TMEM251Q8N6I4 163 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 TMEM208Q9BTX3 173 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 MRPL37Q9BZE1 423 aaKnown RBP4.62□□□□□ -1.67
LIMA1-203ENST00000547825 COMMD5Q9GZQ3 224 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 IGHV3-21A0A0B4J1V1 117 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 A0A1W2PQD3 144 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 H3BTX0 84 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 RPL36A-HNRNPH2H7BZ11 118 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 NPSP0C0P6 89 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 SELLP14151 372 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 DSCR4P56555 118 aaPredicted RBP4.62□□□□□ -1.67
LIMA1-203ENST00000547825 TAS2R45P59539 299 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 CCL7P80098 99 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 TBC1D28Q2M2D7 210 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 GAGE13Q4V321 117 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 GCSAMLQ5JQS6 135 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.62□□□□□ -1.67
LIMA1-203ENST00000547825 SPINK14Q6IE38 97 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 FAM166AQ6J272 317 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 PQLC2Q6ZP29 291 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 OR52L2PQ8NGH6 319 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 PRSS3P2Q8NHM4 247 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 MBD6Q96DN6 1003 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 SLC35E1Q96K37 410 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 PMCHL2Q9BQD1 86 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 KCNIP2Q9NS61 270 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 HIF1ANQ9NWT6 349 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 CISD1Q9NZ45 108 aaKnown RBP4.62□□□□□ -1.67
LIMA1-203ENST00000547825 USP24Q9UPU5 2620 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 LILRA5A6NI73 299 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 COX7A2P2O60397 106 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 LYZL6O75951 148 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 CRYBB3P26998 211 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 CD1BP29016 333 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 RHOBP62745 196 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 UBE2L3P68036 154 aaKnown RBP4.62□□□□□ -1.67
LIMA1-203ENST00000547825 ZNF826PQ6ZT77 177 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 S100A7AQ86SG5 101 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 C1QL4Q86Z23 238 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 ABHD12Q8N2K0 398 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 R3HDM4Q96D70 268 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 SNHG12Q9BXW3 62 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 ANGPTL4Q9BY76 406 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 AKIRIN1Q9H9L7 192 aaPredicted RBP4.62□□□□□ -1.67
LIMA1-203ENST00000547825 UQCR10Q9UDW1 63 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 ZNF391Q9UJN7 358 aa4.62□□□□□ -1.67
LIMA1-203ENST00000547825 DCHS2Q6V1P9 2916 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 KIAA1549Q9HCM3 1950 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 B5MCH6 92 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 FAM157AC9JC47 383 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 IGHV2-5P01817 119 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 APCSP02743 223 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 SLC25A5P05141 298 aaKnown RBP4.61□□□□□ -1.67
LIMA1-203ENST00000547825 ARL14EPLP0DKL9 152 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 IL3RAP26951 378 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 HTR1DP28221 377 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 SLC25A47Q6Q0C1 308 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 UNQ5815/PRO19632Q6UWF5 114 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 TUSC5Q8IXB3 177 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 OR1L4Q8NGR5 311 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 FLYWCH2Q96CP2 140 aaKnown RBP4.61□□□□□ -1.67
LIMA1-203ENST00000547825 OR2H1Q9GZK4 316 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 TBL2Q9Y4P3 447 aaKnown RBP4.61□□□□□ -1.67
LIMA1-203ENST00000547825 C2CD3Q4AC94 2353 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 PRR14LQ5THK1 2151 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 TMSB15BA0A087X1C1 80 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 TMEM30CPA0ZSE6 113 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 DPRXA6NFQ7 191 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 DLEU1O43261 78 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 TFF3Q07654 80 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 TEX38Q6PEX7 206 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 FA2HQ7L5A8 372 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 OR2M3Q8NG83 312 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 OR8A1Q8NGG7 326 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 AKAP9Q99996 3911 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 A0A0U1RQV5 110 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 LOC389332A0A1B0GUA5 103 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 OR5B21A6NL26 309 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 A8MWP6 167 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 K7ERU9 68 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 OR2J3O76001 311 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 NUDT3O95989 172 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 CCL4P13236 92 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 FKBP2P26885 142 aaKnown RBP4.61□□□□□ -1.67
LIMA1-203ENST00000547825 GPR6P46095 362 aaPredicted RBP4.61□□□□□ -1.67
LIMA1-203ENST00000547825 GNB2P62879 340 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 RPL31P62899 125 aaKnown RBP4.61□□□□□ -1.67
LIMA1-203ENST00000547825 PAFAH1B2P68402 229 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 CD300EQ496F6 205 aaPredicted RBP4.61□□□□□ -1.67
LIMA1-203ENST00000547825 LCN12Q6JVE5 192 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 CRIP3Q6Q6R5 217 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 CYP2G1PQ6ZSU1 146 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 MMD2Q8IY49 270 aa4.61□□□□□ -1.67
LIMA1-203ENST00000547825 OR1L1Q8NH94 360 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms