RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 ZNF101Q8IZC7 436 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 ZNF709Q8N972 641 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 OR2M3Q8NG83 312 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 ZFAND1Q8TCF1 268 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 IFT81Q8WYA0 676 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 RMND5BQ96G75 393 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-207ENST00000544052 SERPINI1Q99574 410 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 MARVELD1Q9BSK0 173 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 C9orf16Q9BUW7 83 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 SLC7A11Q9UPY5 501 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 PRELID1Q9Y255 219 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 ZNF337Q9Y3M9 751 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.18□□□□□ -2.069e-7■■■■■ 35.8
SCFD1-207ENST00000544052 ATRQ13535 2644 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 IGKV2-28A0A075B6P5 120 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 A0A096LNT2 108 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 OR6C70A6NIJ9 312 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 ZNF850A8MQ14 1090 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 UPK1AO00322 258 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 IGKV2D-28P01615 120 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 SHBGP04278 402 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 TGFBR1P36897 503 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 B2MP61769 119 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 FLOT2Q14254 428 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 TMEM249Q2WGJ8 235 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 LUZP6Q538Z0 58 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 ZNF880Q6PDB4 577 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 OLIG3Q7RTU3 272 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 MARCH3Q86UD3 253 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 MMGT1Q8N4V1 131 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 LFNGQ8NES3 379 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 FNDC9Q8TBE3 224 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 C16orf78Q8WTQ4 265 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 DGCR14Q96DF8 476 aaKnown RBP2.18□□□□□ -2.06
SCFD1-207ENST00000544052 TMEM56Q96MV1 263 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 TMED9Q9BVK6 235 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 NXF2Q9GZY0 626 aaKnown RBP2.18□□□□□ -2.06
SCFD1-207ENST00000544052 DSN1Q9H410 356 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 RNF122Q9H9V4 155 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 MED11Q9P086 117 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 AP3M1Q9Y2T2 418 aa2.18□□□□□ -2.06
SCFD1-207ENST00000544052 POLR3HQ9Y535 204 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-207ENST00000544052 HIVEP2P31629 2446 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 MXRA5Q9NR99 2828 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 IGLV4-60A0A075B6I1 120 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 IGLV3-32A0A0A0MS00 114 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 A0A0J9YW62 118 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 CENPVL3A0A0U1RRI6 287 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 F5H768 121 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 H0Y980 276 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 TP53I11O14683 189 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 BET1O15155 118 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 ACOX3O15254 700 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 RBP1P09455 135 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 CTXN2P0C2S0 81 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 CRYGSP22914 178 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 TAS2R43P59537 309 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 GRB2P62993 217 aaKnown RBP2.17□□□□□ -2.06
SCFD1-207ENST00000544052 ELF3P78545 371 aaPredicted RBP2.17□□□□□ -2.06
SCFD1-207ENST00000544052 CAV1Q03135 178 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 BIKQ13323 160 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 TOMM34Q15785 309 aaPredicted RBP2.17□□□□□ -2.06
SCFD1-207ENST00000544052 COX19Q49B96 90 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 RBM48Q5RL73 367 aaKnown RBP2.17□□□□□ -2.06
SCFD1-207ENST00000544052 S100A7AQ86SG5 101 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 HS3ST5Q8IZT8 346 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 OSR2Q8N2R0 312 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 ATP6V1C2Q8NEY4 427 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 OR5D18Q8NGL1 313 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 DOK1Q99704 481 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 PDCD1LG2Q9BQ51 273 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 MRPL57Q9BQC6 102 aaKnown RBP2.17□□□□□ -2.06
SCFD1-207ENST00000544052 CHCHD7Q9BUK0 85 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 VPS29Q9UBQ0 182 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 PRO0461Q9UI25 63 aa2.17□□□□□ -2.06
SCFD1-207ENST00000544052 UTP11Q9Y3A2 253 aaKnown RBP2.17□□□□□ -2.06
SCFD1-207ENST00000544052 OBSCNQ5VST9 7968 aa2.16□□□□□ -2.06
SCFD1-207ENST00000544052 ARHGAP32A7KAX9 2087 aa2.16□□□□□ -2.06
SCFD1-207ENST00000544052 DYSFO75923 2080 aa2.16□□□□□ -2.06
SCFD1-207ENST00000544052 STAB1Q9NY15 2570 aa2.16□□□□□ -2.06
SCFD1-207ENST00000544052 FTCDNL1E5RQL4 147 aa2.16□□□□□ -2.06
SCFD1-207ENST00000544052 ZNF593O00488 134 aaPredicted RBP2.16□□□□□ -2.06
SCFD1-207ENST00000544052 IGKV1-39P01597 117 aa2.16□□□□□ -2.06
SCFD1-207ENST00000544052 ORM1P02763 201 aa2.16□□□□□ -2.06
SCFD1-207ENST00000544052 PRB2P02812 416 aaPredicted RBP2.16□□□□□ -2.06
SCFD1-207ENST00000544052 IGKV1D-39P04432 117 aa2.16□□□□□ -2.06
SCFD1-207ENST00000544052 CD79BP40259 229 aa2.16□□□□□ -2.06
SCFD1-207ENST00000544052 DSCR4P56555 118 aaPredicted RBP2.16□□□□□ -2.06
SCFD1-207ENST00000544052 ZNF816Q0VGE8 651 aaPredicted RBP2.16□□□□□ -2.06
SCFD1-207ENST00000544052 PMVKQ15126 192 aa2.16□□□□□ -2.06
SCFD1-207ENST00000544052 RGS21Q2M5E4 152 aa2.16□□□□□ -2.06
SCFD1-207ENST00000544052 PLPPR5Q32ZL2 321 aa2.16□□□□□ -2.06
SCFD1-207ENST00000544052 CDNFQ49AH0 187 aa2.16□□□□□ -2.06
SCFD1-207ENST00000544052 KLHL12Q53G59 568 aa2.16□□□□□ -2.06
SCFD1-207ENST00000544052 DRAM2Q6UX65 266 aa2.16□□□□□ -2.06
SCFD1-207ENST00000544052 GAPTQ8N292 157 aa2.16□□□□□ -2.06
SCFD1-207ENST00000544052 CCNYL1Q8N7R7 359 aa2.16□□□□□ -2.06
SCFD1-207ENST00000544052 OR8G5Q8NG78 346 aa2.16□□□□□ -2.06
SCFD1-207ENST00000544052 ZMYND19Q96E35 227 aaPredicted RBP2.16□□□□□ -2.06
SCFD1-207ENST00000544052 GPR82Q96P67 336 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms