RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 C2orf66Q6UXQ4 117 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 TMEM91Q6ZNR0 172 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 DNM1P46Q6ZS02 220 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 Q6ZSR6 202 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 SMIM5Q71RC9 77 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 UMODL1-AS1Q8N2C9 162 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 MUC15Q8N387 334 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 TPRX1Q8N7U7 411 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 OR8G5Q8NG78 346 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 GPR32P1Q8NGA4 272 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 OR11G2Q8NGC1 345 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 OR2T27Q8NH04 317 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 OR4X1Q8NH49 305 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 SLC25A40Q8TBP6 338 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 MBD3L1Q8WWY6 194 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 FRZBQ92765 325 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 PPCDCQ96CD2 204 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 FLYWCH2Q96CP2 140 aaKnown RBP2.4□□□□□ -2.03
USP28-210ENST00000542033 YPEL2Q96QA6 119 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 TBX15Q96SF7 602 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 NRTNQ99748 197 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 GABRG3Q99928 467 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 ANAPC13Q9BS18 74 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 EBPLQ9BY08 206 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 SRXN1Q9BYN0 137 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 CHIAQ9BZP6 476 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 FXYD6Q9H0Q3 95 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 SLC35B3Q9H1N7 401 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 OR51I2Q9H344 312 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 RERGLQ9H628 205 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 POPDC3Q9HBV1 291 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 ENY2Q9NPA8 101 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 ACP6Q9NPH0 428 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 KCNJ16Q9NPI9 418 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 TMEM106BQ9NUM4 274 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 FAM206AQ9NX38 181 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 KCNIP1Q9NZI2 227 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 PRO0628Q9UI54 55 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 FUT9Q9Y231 359 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 COQ4Q9Y3A0 265 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 RGPD2P0DJD1 1756 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 GON4LQ3T8J9 2241 aa2.4□□□□□ -2.03
USP28-210ENST00000542033 PHLPP1O60346 1717 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 CACNA1SQ13698 1873 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 DOCK5Q9H7D0 1870 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 CICQ96RK0 1608 aaPredicted RBP2.39□□□□□ -2.03
USP28-210ENST00000542033 UBR2Q8IWV8 1755 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 FAM168BA1KXE4 195 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 CD300LBA8K4G0 201 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 ZNF705FA8MVS1 300 aaPredicted RBP2.39□□□□□ -2.03
USP28-210ENST00000542033 H3BQ15 152 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 GABARAPH6UMI1 98 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 J3QLI3 93 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 SIRPB1O00241 398 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 PIRO00625 290 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 NME4O00746 187 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 TAX1BP3O14907 124 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 CHST1O43916 411 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 CLDN11O75508 207 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 EEDO75530 441 aaKnown RBP2.39□□□□□ -2.03
USP28-210ENST00000542033 DUSP14O95147 198 aaKnown RBP2.39□□□□□ -2.03
USP28-210ENST00000542033 SOX14O95416 240 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 REG1AP05451 166 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 SEC11BP0C7V7 166 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 LINC00032P0C843 101 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 ZNF705DP0CH99 300 aaPredicted RBP2.39□□□□□ -2.03
USP28-210ENST00000542033 ZNF705BP0CI00 300 aaPredicted RBP2.39□□□□□ -2.03
USP28-210ENST00000542033 CT45A6P0DMU7 189 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 CT45A5P0DMU8 189 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 CT45A7P0DMV0 189 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 IGLC2P0DOY2 106 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 IGLC3P0DOY3 106 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 ZNF43P17038 809 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 ORM2P19652 201 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 CSRP1P21291 193 aaKnown RBP2.39□□□□□ -2.03
USP28-210ENST00000542033 TSPOP30536 169 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 PYCR1P32322 319 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 GPR1P46091 355 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 POLR2JP52435 117 aaKnown RBP2.39□□□□□ -2.03
USP28-210ENST00000542033 DYNLT1P63172 113 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 TNFAIP6P98066 277 aaPredicted RBP2.39□□□□□ -2.03
USP28-210ENST00000542033 ENDOGQ14249 297 aaKnown RBP2.39□□□□□ -2.03
USP28-210ENST00000542033 TGIF1Q15583 401 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 PMCHL1Q16048 86 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 TBC1D28Q2M2D7 210 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 CT45A1Q5HYN5 189 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 SOHLH1Q5JUK2 328 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 FHL5Q5TD97 284 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 UNQ5815/PRO19632Q6UWF5 114 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 SBSNQ6UWP8 590 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 Q6ZN92 141 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 SLC25A48Q6ZT89 311 aaKnown RBP2.39□□□□□ -2.03
USP28-210ENST00000542033 C17orf82Q86X59 251 aaPredicted RBP2.39□□□□□ -2.03
USP28-210ENST00000542033 ZNF547Q8IVP9 402 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 ZNF567Q8N184 647 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 OSR2Q8N2R0 312 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.39□□□□□ -2.03
USP28-210ENST00000542033 OR52R1Q8NGF1 315 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 MFSD8Q8NHS3 518 aa2.39□□□□□ -2.03
USP28-210ENST00000542033 CT45A3Q8NHU0 189 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms