RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 SLC24A4Q8NFF2 622 aa10.72□□□□□ -0.69
SFSWAP-209ENST00000540469 SPTBN2O15020 2390 aa10.72□□□□□ -0.69
SFSWAP-209ENST00000540469 LOC105371242A0A075B767 164 aa10.72□□□□□ -0.69
SFSWAP-209ENST00000540469 IGHV1-45A0A0A0MS14 117 aa10.72□□□□□ -0.69
SFSWAP-209ENST00000540469 OR7C2O60412 319 aa10.72□□□□□ -0.69
SFSWAP-209ENST00000540469 CGAP01215 116 aa10.72□□□□□ -0.69
SFSWAP-209ENST00000540469 OPRK1P41145 380 aa10.72□□□□□ -0.69
SFSWAP-209ENST00000540469 ERVK-16P61578 105 aa10.72□□□□□ -0.69
SFSWAP-209ENST00000540469 RELBQ01201 579 aa10.72□□□□□ -0.69
SFSWAP-209ENST00000540469 AESQ08117 197 aa10.72□□□□□ -0.69
SFSWAP-209ENST00000540469 PSG5Q15238 335 aa10.72□□□□□ -0.69
SFSWAP-209ENST00000540469 OR10J3Q5JRS4 329 aa10.72□□□□□ -0.69
SFSWAP-209ENST00000540469 Q6P435 159 aa10.72□□□□□ -0.69
SFSWAP-209ENST00000540469 CXorf67Q86X51 503 aaPredicted RBP10.72□□□□□ -0.69
SFSWAP-209ENST00000540469 TUSC5Q8IXB3 177 aa10.72□□□□□ -0.69
SFSWAP-209ENST00000540469 ABHD12Q8N2K0 398 aa10.72□□□□□ -0.69
SFSWAP-209ENST00000540469 CELSR3Q9NYQ7 3312 aa10.72□□□□□ -0.69
SFSWAP-209ENST00000540469 HBZP02008 142 aa10.71□□□□□ -0.69
SFSWAP-209ENST00000540469 PMCHL1Q16048 86 aa10.71□□□□□ -0.69
SFSWAP-209ENST00000540469 C1orf185Q5T7R7 199 aa10.71□□□□□ -0.69
SFSWAP-209ENST00000540469 C19orf35Q6ZS72 473 aa10.71□□□□□ -0.69
SFSWAP-209ENST00000540469 LOXL4Q96JB6 756 aa10.71□□□□□ -0.69
SFSWAP-209ENST00000540469 GGTLC1Q9BX51 225 aa10.71□□□□□ -0.69
SFSWAP-209ENST00000540469 SEPSECSQ9HD40 501 aaKnown RBP10.71□□□□□ -0.69
SFSWAP-209ENST00000540469 BDP1A6H8Y1 2624 aa10.71□□□□□ -0.69
SFSWAP-209ENST00000540469 IGHV5-10-1A0A0J9YXX1 117 aa10.71□□□□□ -0.69
SFSWAP-209ENST00000540469 C10orf142B7Z368 130 aa10.71□□□□□ -0.69
SFSWAP-209ENST00000540469 C12orf77C9JDV5 145 aa10.71□□□□□ -0.69
SFSWAP-209ENST00000540469 GOSR1O95249 250 aa10.71□□□□□ -0.69
SFSWAP-209ENST00000540469 HLA-DQA1P01909 254 aa10.71□□□□□ -0.69
SFSWAP-209ENST00000540469 OR2M7Q8NG81 312 aa10.71□□□□□ -0.69
SFSWAP-209ENST00000540469 MGST2Q99735 147 aa10.71□□□□□ -0.69
SFSWAP-209ENST00000540469 SFXN3Q9BWM7 321 aa10.71□□□□□ -0.69
SFSWAP-209ENST00000540469 CHODLQ9H9P2 273 aa10.71□□□□□ -0.69
SFSWAP-209ENST00000540469 ARL2-SNX15V9GYD0 113 aa10.71□□□□□ -0.69
SFSWAP-209ENST00000540469 EP300Q09472 2414 aaPredicted RBP10.71□□□□□ -0.7
SFSWAP-209ENST00000540469 DCAF12Q5T6F0 453 aa10.71□□□□□ -0.7
SFSWAP-209ENST00000540469 VKORC1L1Q8N0U8 176 aa10.71□□□□□ -0.7
SFSWAP-209ENST00000540469 Q8N976 141 aa10.71□□□□□ -0.7
SFSWAP-209ENST00000540469 CLEC7AQ9BXN2 247 aa10.71□□□□□ -0.7
SFSWAP-209ENST00000540469 PKIBQ9C010 78 aa10.71□□□□□ -0.7
SFSWAP-209ENST00000540469 WASHC3Q9Y3C0 194 aa10.71□□□□□ -0.7
SFSWAP-209ENST00000540469 TIMM8BQ9Y5J9 83 aaPredicted RBP10.71□□□□□ -0.7
SFSWAP-209ENST00000540469 FOXH1O75593 365 aa10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 AMY1AP04745 511 aa10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 VWC2Q2TAL6 325 aa10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 SCCPDHQ8NBX0 429 aa10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 OR2D3Q8NGH3 330 aa10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 TSKUQ8WUA8 353 aa10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 V9GYV3 84 aa10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 IGHV2OR16-5A0A0B4J2B6 119 aa10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 A0A1W2PQM1 296 aa10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 IGHV3-13P01766 116 aa10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 IGHV3-7P01780 117 aa10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 ARR3P36575 388 aa10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 B3GALT5-AS1P59052 145 aa10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 IBA57Q5T440 356 aaKnown RBP10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 WFDC8Q8IUA0 241 aa10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 NHLRC2Q8NBF2 726 aa10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 ENY2Q9NPA8 101 aa10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 AHCTF1Q8WYP5 2266 aa10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 ZNF503-AS2A6NEH8 195 aa10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 HAND1O96004 215 aa10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 CA1P00915 261 aaPredicted RBP10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 OR9G9P0C7N8 305 aa10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 COX6A1P12074 109 aa10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 CX3CL1P78423 397 aa10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 TMEM136Q6ZRR5 245 aa10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 Q8IYB0 196 aa10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 HSD17B10Q99714 261 aaKnown RBP10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 SSBP3Q9BWW4 388 aaPredicted RBP10.7□□□□□ -0.7
SFSWAP-209ENST00000540469 BMPR1BO00238 502 aa10.69□□□□□ -0.7
SFSWAP-209ENST00000540469 COL8A2P25067 703 aa10.69□□□□□ -0.7
SFSWAP-209ENST00000540469 EDDM3AQ14507 147 aa10.69□□□□□ -0.7
SFSWAP-209ENST00000540469 EFNB3Q15768 340 aa10.69□□□□□ -0.7
SFSWAP-209ENST00000540469 COX19Q49B96 90 aa10.69□□□□□ -0.7
SFSWAP-209ENST00000540469 OR4A47Q6IF82 309 aa10.69□□□□□ -0.7
SFSWAP-209ENST00000540469 MRPL14Q6P1L8 145 aaKnown RBP10.69□□□□□ -0.7
SFSWAP-209ENST00000540469 STPG3Q8N7X2 389 aa10.69□□□□□ -0.7
SFSWAP-209ENST00000540469 SMRP1Q8NCR6 262 aa10.69□□□□□ -0.7
SFSWAP-209ENST00000540469 C12orf49Q9H741 205 aa10.69□□□□□ -0.7
SFSWAP-209ENST00000540469 SH2D2AQ9NP31 389 aa10.69□□□□□ -0.7
SFSWAP-209ENST00000540469 GPR12P47775 334 aa10.69□□□□□ -0.7
SFSWAP-209ENST00000540469 GNG12Q9UBI6 72 aa10.69□□□□□ -0.7
SFSWAP-209ENST00000540469 CDC42EP3Q9UKI2 254 aa10.69□□□□□ -0.7
SFSWAP-209ENST00000540469 MRPS16Q9Y3D3 137 aaKnown RBP10.69□□□□□ -0.7
SFSWAP-209ENST00000540469 PTPRZ1P23471 2315 aaPredicted RBP10.69□□□□□ -0.7
SFSWAP-209ENST00000540469 KMT2EQ8IZD2 1858 aa10.69□□□□□ -0.7
SFSWAP-209ENST00000540469 LINC00473A8K010 186 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 CAMPP49913 170 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 NIT1Q86X76 327 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 IMMP1LQ96LU5 166 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 NPVFQ9HCQ7 196 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 IL19Q9UHD0 177 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 TRAV9-2A0A087WT02 112 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 TRGV10A0A0A0MS01 117 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 C9JCJ5 164 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 H0Y8G0 127 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 MMP23AO75900 390 aa10.68□□□□□ -0.7
SFSWAP-209ENST00000540469 MT-CO3P00414 261 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms