RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 CRHBPP24387 322 aa14.76□□□□□ -0.05
LPCAT3-210ENST00000540090 GPR183P32249 361 aa14.76□□□□□ -0.05
LPCAT3-210ENST00000540090 MFSD4AQ8N468 514 aa14.76□□□□□ -0.05
LPCAT3-210ENST00000540090 ZNF502Q8TBZ5 544 aa14.76□□□□□ -0.05
LPCAT3-210ENST00000540090 TCTEX1D2Q8WW35 142 aa14.76□□□□□ -0.05
LPCAT3-210ENST00000540090 ZNF436Q9C0F3 470 aaPredicted RBP14.76□□□□□ -0.05
LPCAT3-210ENST00000540090 ACOT13Q9NPJ3 140 aa14.76□□□□□ -0.05
LPCAT3-210ENST00000540090 SPATA2Q9UM82 520 aa14.76□□□□□ -0.05
LPCAT3-210ENST00000540090 IGHV3-35A0A0C4DH35 117 aa14.75□□□□□ -0.05
LPCAT3-210ENST00000540090 IFITM5A6NNB3 132 aa14.75□□□□□ -0.05
LPCAT3-210ENST00000540090 HRASP01112 189 aa14.75□□□□□ -0.05
LPCAT3-210ENST00000540090 HLA-GP17693 338 aa14.75□□□□□ -0.05
LPCAT3-210ENST00000540090 OR10A3P58181 314 aa14.75□□□□□ -0.05
LPCAT3-210ENST00000540090 ARL6IP1Q15041 203 aa14.75□□□□□ -0.05
LPCAT3-210ENST00000540090 RCN1Q15293 331 aa14.75□□□□□ -0.05
LPCAT3-210ENST00000540090 PLET1Q6UQ28 207 aa14.75□□□□□ -0.05
LPCAT3-210ENST00000540090 SSX9Q7RTT3 188 aa14.75□□□□□ -0.05
LPCAT3-210ENST00000540090 DUSP21Q9H596 190 aa14.75□□□□□ -0.05
LPCAT3-210ENST00000540090 DNAH6Q9C0G6 4158 aa14.75□□□□□ -0.05
LPCAT3-210ENST00000540090 TRAV1-2A0A0B4J238 106 aa14.74□□□□□ -0.05
LPCAT3-210ENST00000540090 PDCD5O14737 125 aa14.74□□□□□ -0.05
LPCAT3-210ENST00000540090 CASQ2O14958 399 aaPredicted RBP14.74□□□□□ -0.05
LPCAT3-210ENST00000540090 PTBP1P26599 531 aaKnown RBP eCLIP14.74□□□□□ -0.05
LPCAT3-210ENST00000540090 ODF3L2Q3SX64 289 aa14.74□□□□□ -0.05
LPCAT3-210ENST00000540090 CDNFQ49AH0 187 aa14.74□□□□□ -0.05
LPCAT3-210ENST00000540090 LAMTOR1Q6IAA8 161 aa14.74□□□□□ -0.05
LPCAT3-210ENST00000540090 ZNF66Q6ZN08 573 aa14.74□□□□□ -0.05
LPCAT3-210ENST00000540090 OR4A5Q8NH83 315 aa14.74□□□□□ -0.05
LPCAT3-210ENST00000540090 DCSTAMPQ9H295 470 aa14.74□□□□□ -0.05
LPCAT3-210ENST00000540090 MAP6D1Q9H9H5 199 aa14.74□□□□□ -0.05
LPCAT3-210ENST00000540090 BET1LQ9NYM9 111 aa14.74□□□□□ -0.05
LPCAT3-210ENST00000540090 TAS2R8Q9NYW2 309 aa14.74□□□□□ -0.05
LPCAT3-210ENST00000540090 OR2B8PP59922 312 aa14.73□□□□□ -0.05
LPCAT3-210ENST00000540090 CNIH2Q6PI25 160 aa14.73□□□□□ -0.05
LPCAT3-210ENST00000540090 TMEM190Q8WZ59 177 aa14.73□□□□□ -0.05
LPCAT3-210ENST00000540090 GALNT14Q96FL9 552 aa14.73□□□□□ -0.05
LPCAT3-210ENST00000540090 MGLLQ99685 303 aa14.73□□□□□ -0.05
LPCAT3-210ENST00000540090 TPRKBQ9Y3C4 175 aa14.73□□□□□ -0.05
LPCAT3-210ENST00000540090 TGOLN2O43493 480 aa14.72□□□□□ -0.05
LPCAT3-210ENST00000540090 RPL35AP18077 110 aaKnown RBP14.72□□□□□ -0.05
LPCAT3-210ENST00000540090 HACD4Q5VWC8 232 aa14.72□□□□□ -0.05
LPCAT3-210ENST00000540090 AIFM2Q9BRQ8 373 aa14.72□□□□□ -0.05
LPCAT3-210ENST00000540090 ATG5Q9H1Y0 275 aa14.72□□□□□ -0.05
LPCAT3-210ENST00000540090 THYN1Q9P016 225 aa14.72□□□□□ -0.05
LPCAT3-210ENST00000540090 IGLC7A0M8Q6 106 aa14.71□□□□□ -0.05
LPCAT3-210ENST00000540090 RGS10O43665 173 aa14.71□□□□□ -0.05
LPCAT3-210ENST00000540090 S1PR2O95136 353 aa14.71□□□□□ -0.05
LPCAT3-210ENST00000540090 TIMM50Q3ZCQ8 353 aa14.71□□□□□ -0.05
LPCAT3-210ENST00000540090 VN1R17PQ8TDU5 208 aa14.71□□□□□ -0.05
LPCAT3-210ENST00000540090 GPHA2Q96T91 129 aa14.71□□□□□ -0.05
LPCAT3-210ENST00000540090 SRSF8Q9BRL6 282 aaKnown RBP14.71□□□□□ -0.05
LPCAT3-210ENST00000540090 DAZ1Q9NQZ3 744 aaKnown RBP14.71□□□□□ -0.05
LPCAT3-210ENST00000540090 RYR1P21817 5038 aa14.71□□□□□ -0.05
LPCAT3-210ENST00000540090 EBAG9O00559 213 aa14.7□□□□□ -0.06
LPCAT3-210ENST00000540090 RPA2P15927 270 aa14.7□□□□□ -0.06
LPCAT3-210ENST00000540090 FCGR2BP31994 310 aaPredicted RBP14.7□□□□□ -0.06
LPCAT3-210ENST00000540090 HRASLSQ9HDD0 168 aa14.7□□□□□ -0.06
LPCAT3-210ENST00000540090 OR4C46A6NHA9 309 aa14.69□□□□□ -0.06
LPCAT3-210ENST00000540090 RAB3BP20337 219 aa14.69□□□□□ -0.06
LPCAT3-210ENST00000540090 GATAD1Q8WUU5 269 aa14.69□□□□□ -0.06
LPCAT3-210ENST00000540090 VCXQ9H320 206 aa14.69□□□□□ -0.06
LPCAT3-210ENST00000540090 ANXA10Q9UJ72 324 aa14.69□□□□□ -0.06
LPCAT3-210ENST00000540090 TRAV3A0A0B4J244 114 aa14.68□□□□□ -0.06
LPCAT3-210ENST00000540090 K7EMT4 169 aa14.68□□□□□ -0.06
LPCAT3-210ENST00000540090 UPK2O00526 184 aa14.68□□□□□ -0.06
LPCAT3-210ENST00000540090 PRR20EP86478 221 aa14.68□□□□□ -0.06
LPCAT3-210ENST00000540090 PRR20CP86479 221 aa14.68□□□□□ -0.06
LPCAT3-210ENST00000540090 PRR20DP86480 221 aa14.68□□□□□ -0.06
LPCAT3-210ENST00000540090 PRR20BP86481 221 aa14.68□□□□□ -0.06
LPCAT3-210ENST00000540090 PRR20AP86496 221 aa14.68□□□□□ -0.06
LPCAT3-210ENST00000540090 MSMO1Q15800 293 aa14.68□□□□□ -0.06
LPCAT3-210ENST00000540090 POU2AF1Q16633 256 aa14.68□□□□□ -0.06
LPCAT3-210ENST00000540090 PRSS48Q7RTY5 328 aa14.68□□□□□ -0.06
LPCAT3-210ENST00000540090 SPAG16Q8N0X2 631 aa14.68□□□□□ -0.06
LPCAT3-210ENST00000540090 OR5B3Q8NH48 314 aa14.68□□□□□ -0.06
LPCAT3-210ENST00000540090 NUDCD2Q8WVJ2 157 aa14.68□□□□□ -0.06
LPCAT3-210ENST00000540090 COMMD5Q9GZQ3 224 aa14.68□□□□□ -0.06
LPCAT3-210ENST00000540090 CCDC90BQ9GZT6 254 aa14.68□□□□□ -0.06
LPCAT3-210ENST00000540090 MFFQ9GZY8 342 aa14.68□□□□□ -0.06
LPCAT3-210ENST00000540090 CSTL1Q9H114 145 aa14.68□□□□□ -0.06
LPCAT3-210ENST00000540090 OR2T8A6NH00 312 aa14.67□□□□□ -0.06
LPCAT3-210ENST00000540090 NDUFA4O00483 81 aa14.67□□□□□ -0.06
LPCAT3-210ENST00000540090 RBFOX2O43251 390 aaKnown RBP eCLIP14.67□□□□□ -0.06
LPCAT3-210ENST00000540090 MYL9P24844 172 aa14.67□□□□□ -0.06
LPCAT3-210ENST00000540090 TAS2R31P59538 309 aa14.67□□□□□ -0.06
LPCAT3-210ENST00000540090 NANOS2P60321 138 aaKnown RBP14.67□□□□□ -0.06
LPCAT3-210ENST00000540090 SPSB3Q6PJ21 355 aa14.67□□□□□ -0.06
LPCAT3-210ENST00000540090 NR2C2APQ86WQ0 139 aa14.67□□□□□ -0.06
LPCAT3-210ENST00000540090 C11orf45Q8TAV5 145 aa14.67□□□□□ -0.06
LPCAT3-210ENST00000540090 BSCL2Q96G97 398 aaPredicted RBP14.67□□□□□ -0.06
LPCAT3-210ENST00000540090 RARRES2Q99969 163 aa14.67□□□□□ -0.06
LPCAT3-210ENST00000540090 C6orf62Q9GZU0 229 aaPredicted RBP14.67□□□□□ -0.06
LPCAT3-210ENST00000540090 CCL28Q9NRJ3 127 aa14.67□□□□□ -0.06
LPCAT3-210ENST00000540090 TMEM235A6NFC5 223 aa14.66□□□□□ -0.06
LPCAT3-210ENST00000540090 CYB5BO43169 146 aa14.66□□□□□ -0.06
LPCAT3-210ENST00000540090 TNFSF12O43508 249 aa14.66□□□□□ -0.06
LPCAT3-210ENST00000540090 SSX5O60225 188 aa14.66□□□□□ -0.06
LPCAT3-210ENST00000540090 IFNA4P05014 189 aa14.66□□□□□ -0.06
LPCAT3-210ENST00000540090 CTSDP07339 412 aaPredicted RBP14.66□□□□□ -0.06
LPCAT3-210ENST00000540090 FGF2P09038 288 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms