RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 TESCQ96BS2 214 aa0.66□□□□□ -2.3
CCDC7-208ENST00000537047 OR51I2Q9H344 312 aa0.66□□□□□ -2.3
CCDC7-208ENST00000537047 PLEKHJ1Q9NW61 149 aa0.66□□□□□ -2.3
CCDC7-208ENST00000537047 DKKL1Q9UK85 242 aa0.66□□□□□ -2.3
CCDC7-208ENST00000537047 ANAPC10Q9UM13 185 aa0.66□□□□□ -2.3
CCDC7-208ENST00000537047 NAV1Q8NEY1 1877 aa0.66□□□□□ -2.3
CCDC7-208ENST00000537047 FLT4P35916 1363 aa0.66□□□□□ -2.3
CCDC7-208ENST00000537047 KIF15Q9NS87 1388 aa0.66□□□□□ -2.3
CCDC7-208ENST00000537047 BRWD1Q9NSI6 2320 aa0.66□□□□□ -2.3
CCDC7-208ENST00000537047 SCAF11Q99590 1463 aaKnown RBP0.66□□□□□ -2.3
CCDC7-208ENST00000537047 PTPRSQ13332 1948 aa0.66□□□□□ -2.3
CCDC7-208ENST00000537047 OR4C45A6NMZ5 311 aa0.65□□□□□ -2.31
CCDC7-208ENST00000537047 ITGB1BP1O14713 200 aa0.65□□□□□ -2.31
CCDC7-208ENST00000537047 PFDN6O15212 129 aa0.65□□□□□ -2.31
CCDC7-208ENST00000537047 LEPROTO15243 131 aa0.65□□□□□ -2.31
CCDC7-208ENST00000537047 NSA2O95478 260 aaKnown RBP0.65□□□□□ -2.31
CCDC7-208ENST00000537047 PPBPP02775 128 aa0.65□□□□□ -2.31
CCDC7-208ENST00000537047 C8orf88P0DMB2 117 aa0.65□□□□□ -2.31
CCDC7-208ENST00000537047 SULT1A3P0DMM9 295 aa0.65□□□□□ -2.31
CCDC7-208ENST00000537047 SULT1A4P0DMN0 295 aa0.65□□□□□ -2.31
CCDC7-208ENST00000537047 DEFA4P12838 97 aa0.65□□□□□ -2.31
CCDC7-208ENST00000537047 NFYAP23511 347 aaPredicted RBP0.65□□□□□ -2.31
CCDC7-208ENST00000537047 CSN1S1P47710 185 aa0.65□□□□□ -2.31
CCDC7-208ENST00000537047 RAB13P51153 203 aa0.65□□□□□ -2.31
CCDC7-208ENST00000537047 CTAG1AP78358 180 aa0.65□□□□□ -2.31
CCDC7-208ENST00000537047 EMX1Q04741 257 aaPredicted RBP0.65□□□□□ -2.31
CCDC7-208ENST00000537047 PPP1R1AQ13522 171 aa0.65□□□□□ -2.31
CCDC7-208ENST00000537047 TNFAIP8L3Q5GJ75 292 aa0.65□□□□□ -2.31
CCDC7-208ENST00000537047 C1orf194Q5T5A4 169 aa0.65□□□□□ -2.31
CCDC7-208ENST00000537047 FAM173BQ6P4H8 233 aa0.65□□□□□ -2.31
CCDC7-208ENST00000537047 ZNF676Q8N7Q3 588 aa0.65□□□□□ -2.31
CCDC7-208ENST00000537047 C9orf163Q8N9P6 203 aa0.65□□□□□ -2.31
CCDC7-208ENST00000537047 OR8B3Q8NGG8 313 aa0.65□□□□□ -2.31
CCDC7-208ENST00000537047 CXorf21Q9HAI6 301 aa0.65□□□□□ -2.31
CCDC7-208ENST00000537047 IMP3Q9NV31 184 aaKnown RBP0.65□□□□□ -2.31
CCDC7-208ENST00000537047 C15orf41Q9Y2V0 281 aa0.65□□□□□ -2.31
CCDC7-208ENST00000537047 TIMM22Q9Y584 194 aa0.65□□□□□ -2.31
CCDC7-208ENST00000537047 CPAMD8Q8IZJ3 1885 aa0.65□□□□□ -2.31
CCDC7-208ENST00000537047 SMARCA4P51532 1647 aa0.64□□□□□ -2.31
CCDC7-208ENST00000537047 TRBV10-2A0A0K0K1G8 114 aa0.64□□□□□ -2.31
CCDC7-208ENST00000537047 IBA57-AS1B1ANH7 110 aa0.64□□□□□ -2.31
CCDC7-208ENST00000537047 SDCBPO00560 298 aaPredicted RBP0.64□□□□□ -2.31
CCDC7-208ENST00000537047 SLC22A1O15245 554 aa0.64□□□□□ -2.31
CCDC7-208ENST00000537047 APOEP02649 317 aa0.64□□□□□ -2.31
CCDC7-208ENST00000537047 TYMSP04818 313 aa0.64□□□□□ -2.31
CCDC7-208ENST00000537047 METTL15P1P0C7V9 234 aa0.64□□□□□ -2.31
CCDC7-208ENST00000537047 S100A7P31151 101 aa0.64□□□□□ -2.31
CCDC7-208ENST00000537047 REG1BP48304 166 aa0.64□□□□□ -2.31
CCDC7-208ENST00000537047 FXYD2P54710 66 aa0.64□□□□□ -2.31
CCDC7-208ENST00000537047 OR4D2P58180 307 aa0.64□□□□□ -2.31
CCDC7-208ENST00000537047 TNFAIP6P98066 277 aaPredicted RBP0.64□□□□□ -2.31
CCDC7-208ENST00000537047 CAV1Q03135 178 aa0.64□□□□□ -2.31
CCDC7-208ENST00000537047 FABP9Q0Z7S8 132 aa0.64□□□□□ -2.31
CCDC7-208ENST00000537047 FAM27BQ5VT28 67 aa0.64□□□□□ -2.31
CCDC7-208ENST00000537047 PDPK2PQ6A1A2 396 aa0.64□□□□□ -2.31
CCDC7-208ENST00000537047 DHFR2Q86XF0 187 aa0.64□□□□□ -2.31
CCDC7-208ENST00000537047 Q8N2B8 174 aa0.64□□□□□ -2.31
CCDC7-208ENST00000537047 TMEM161BQ8NDZ6 487 aa0.64□□□□□ -2.31
CCDC7-208ENST00000537047 OR1M1Q8NGA1 313 aa0.64□□□□□ -2.31
CCDC7-208ENST00000537047 ROPN1LQ96C74 230 aa0.64□□□□□ -2.31
CCDC7-208ENST00000537047 ERMAPQ96PL5 475 aaPredicted RBP0.64□□□□□ -2.31
CCDC7-208ENST00000537047 MAP1LC3AQ9H492 121 aa0.64□□□□□ -2.31
CCDC7-208ENST00000537047 COQ4Q9Y3A0 265 aa0.64□□□□□ -2.31
CCDC7-208ENST00000537047 PXMP4Q9Y6I8 212 aa0.64□□□□□ -2.31
CCDC7-208ENST00000537047 ABCC11Q96J66 1382 aa0.63□□□□□ -2.31
CCDC7-208ENST00000537047 A0A0A6YYH2 397 aa0.63□□□□□ -2.31
CCDC7-208ENST00000537047 A6NJ64 397 aa0.63□□□□□ -2.31
CCDC7-208ENST00000537047 I3L521 148 aa0.63□□□□□ -2.31
CCDC7-208ENST00000537047 LST1O00453 97 aa0.63□□□□□ -2.31
CCDC7-208ENST00000537047 COCHO43405 550 aa0.63□□□□□ -2.31
CCDC7-208ENST00000537047 NOS1APO75052 506 aaPredicted RBP0.63□□□□□ -2.31
CCDC7-208ENST00000537047 C1QAP02745 245 aa0.63□□□□□ -2.31
CCDC7-208ENST00000537047 SRP19P09132 144 aaKnown RBP0.63□□□□□ -2.31
CCDC7-208ENST00000537047 FGF6P10767 208 aa0.63□□□□□ -2.31
CCDC7-208ENST00000537047 KCNE1P15382 129 aa0.63□□□□□ -2.31
CCDC7-208ENST00000537047 MYL12AP19105 171 aa0.63□□□□□ -2.31
CCDC7-208ENST00000537047 COMMD7Q86VX2 200 aa0.63□□□□□ -2.31
CCDC7-208ENST00000537047 PIGXQ8TBF5 258 aa0.63□□□□□ -2.31
CCDC7-208ENST00000537047 ANKRD7Q92527 254 aa0.63□□□□□ -2.31
CCDC7-208ENST00000537047 UPF3BQ9BZI7 483 aaKnown RBP0.63□□□□□ -2.31
CCDC7-208ENST00000537047 FAM96AQ9H5X1 160 aa0.63□□□□□ -2.31
CCDC7-208ENST00000537047 SNURFQ9Y675 71 aa0.63□□□□□ -2.31
CCDC7-208ENST00000537047 LHFPL6Q9Y693 200 aa0.63□□□□□ -2.31
CCDC7-208ENST00000537047 MUC5ACP98088 5654 aa0.63□□□□□ -2.31
CCDC7-208ENST00000537047 TONSLQ96HA7 1378 aa0.62□□□□□ -2.31
CCDC7-208ENST00000537047 C1orf232A0A0U1RR37 186 aa0.62□□□□□ -2.31
CCDC7-208ENST00000537047 IRGMA1A4Y4 181 aa0.62□□□□□ -2.31
CCDC7-208ENST00000537047 YEATS4O95619 227 aa0.62□□□□□ -2.31
CCDC7-208ENST00000537047 REG1AP05451 166 aa0.62□□□□□ -2.31
CCDC7-208ENST00000537047 OCM2P0CE71 109 aa0.62□□□□□ -2.31
CCDC7-208ENST00000537047 CCL1P22362 96 aa0.62□□□□□ -2.31
CCDC7-208ENST00000537047 HLA-DMBP28068 263 aa0.62□□□□□ -2.31
CCDC7-208ENST00000537047 RPL12P30050 165 aaKnown RBP0.62□□□□□ -2.31
CCDC7-208ENST00000537047 RPL18Q07020 188 aaKnown RBP0.62□□□□□ -2.31
CCDC7-208ENST00000537047 RSU1Q15404 277 aa0.62□□□□□ -2.31
CCDC7-208ENST00000537047 GLT8D1Q68CQ7 371 aa0.62□□□□□ -2.31
CCDC7-208ENST00000537047 LRRN1Q6UXK5 716 aa0.62□□□□□ -2.31
CCDC7-208ENST00000537047 C12orf29Q8N999 325 aa0.62□□□□□ -2.31
CCDC7-208ENST00000537047 DIRAS2Q96HU8 199 aa0.62□□□□□ -2.31
CCDC7-208ENST00000537047 YIPF3Q9GZM5 350 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms