RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 JTBO76095 146 aa14.8□□□□□ -0.04
TNFRSF1B-204ENST00000536782 CLEC2LP0C7M8 214 aa14.8□□□□□ -0.04
TNFRSF1B-204ENST00000536782 DEFA4P12838 97 aa14.8□□□□□ -0.04
TNFRSF1B-204ENST00000536782 CTRB1P17538 263 aa14.8□□□□□ -0.04
TNFRSF1B-204ENST00000536782 MSMO1Q15800 293 aa14.8□□□□□ -0.04
TNFRSF1B-204ENST00000536782 KLK9Q2XQG4 91 aa14.8□□□□□ -0.04
TNFRSF1B-204ENST00000536782 CTRB2Q6GPI1 263 aa14.8□□□□□ -0.04
TNFRSF1B-204ENST00000536782 BEST4Q8NFU0 473 aa14.8□□□□□ -0.04
TNFRSF1B-204ENST00000536782 OR4A5Q8NH83 315 aa14.8□□□□□ -0.04
TNFRSF1B-204ENST00000536782 SECTM1Q8WVN6 248 aa14.8□□□□□ -0.04
TNFRSF1B-204ENST00000536782 CACNG8Q8WXS5 425 aa14.8□□□□□ -0.04
TNFRSF1B-204ENST00000536782 GPHA2Q96T91 129 aa14.8□□□□□ -0.04
TNFRSF1B-204ENST00000536782 AIFM2Q9BRQ8 373 aa14.8□□□□□ -0.04
TNFRSF1B-204ENST00000536782 CCL28Q9NRJ3 127 aa14.8□□□□□ -0.04
TNFRSF1B-204ENST00000536782 KLK9Q9UKQ9 250 aa14.8□□□□□ -0.04
TNFRSF1B-204ENST00000536782 TNFSF12O43508 249 aa14.79□□□□□ -0.04
TNFRSF1B-204ENST00000536782 HLA-GP17693 338 aa14.79□□□□□ -0.04
TNFRSF1B-204ENST00000536782 FCGR2CP31995 323 aa14.79□□□□□ -0.04
TNFRSF1B-204ENST00000536782 ZNF57Q68EA5 555 aaPredicted RBP14.79□□□□□ -0.04
TNFRSF1B-204ENST00000536782 OR4A47Q6IF82 309 aa14.79□□□□□ -0.04
TNFRSF1B-204ENST00000536782 CROCCP3Q8IVE0 287 aa14.79□□□□□ -0.04
TNFRSF1B-204ENST00000536782 BET1LQ9NYM9 111 aa14.79□□□□□ -0.04
TNFRSF1B-204ENST00000536782 ALMS1Q8TCU4 4167 aa14.78□□□□□ -0.04
TNFRSF1B-204ENST00000536782 TMEM213A2RRL7 107 aa14.78□□□□□ -0.04
TNFRSF1B-204ENST00000536782 A8MWP6 167 aa14.78□□□□□ -0.04
TNFRSF1B-204ENST00000536782 REG1AP05451 166 aa14.78□□□□□ -0.04
TNFRSF1B-204ENST00000536782 MYOD1P15172 320 aa14.78□□□□□ -0.04
TNFRSF1B-204ENST00000536782 IDNKQ5T6J7 187 aa14.78□□□□□ -0.04
TNFRSF1B-204ENST00000536782 TMEM61Q8N0U2 210 aa14.78□□□□□ -0.04
TNFRSF1B-204ENST00000536782 SPAG16Q8N0X2 631 aa14.78□□□□□ -0.04
TNFRSF1B-204ENST00000536782 ZBTB34Q8NCN2 500 aa14.78□□□□□ -0.04
TNFRSF1B-204ENST00000536782 OR13F1Q8NGS4 319 aa14.78□□□□□ -0.04
TNFRSF1B-204ENST00000536782 CXorf58Q96LI9 332 aa14.78□□□□□ -0.04
TNFRSF1B-204ENST00000536782 HRASLSQ9HDD0 168 aa14.78□□□□□ -0.04
TNFRSF1B-204ENST00000536782 SELENOKQ9Y6D0 94 aa14.78□□□□□ -0.04
TNFRSF1B-204ENST00000536782 IGLV11-55A0A075B6I3 123 aa14.77□□□□□ -0.05
TNFRSF1B-204ENST00000536782 TRAV18A0A075B6X5 111 aa14.77□□□□□ -0.05
TNFRSF1B-204ENST00000536782 TRBV7-1A0A0A6YYK4 115 aa14.77□□□□□ -0.05
TNFRSF1B-204ENST00000536782 PPYP01298 95 aa14.77□□□□□ -0.05
TNFRSF1B-204ENST00000536782 PTHLHP12272 177 aa14.77□□□□□ -0.05
TNFRSF1B-204ENST00000536782 HOGA1Q86XE5 327 aa14.77□□□□□ -0.05
TNFRSF1B-204ENST00000536782 GVQW1Q8N7I0 195 aa14.77□□□□□ -0.05
TNFRSF1B-204ENST00000536782 UXS1Q8NBZ7 420 aa14.77□□□□□ -0.05
TNFRSF1B-204ENST00000536782 OR52B4Q8NGK2 314 aa14.77□□□□□ -0.05
TNFRSF1B-204ENST00000536782 MLXQ9UH92 298 aa14.77□□□□□ -0.05
TNFRSF1B-204ENST00000536782 A0A0A6YYH2 397 aa14.76□□□□□ -0.05
TNFRSF1B-204ENST00000536782 A6NJ64 397 aa14.76□□□□□ -0.05
TNFRSF1B-204ENST00000536782 CGB1A6NKQ9 187 aa14.76□□□□□ -0.05
TNFRSF1B-204ENST00000536782 RBFOX2O43251 390 aaKnown RBP eCLIP14.76□□□□□ -0.057e-6■■■□□ 16.5
TNFRSF1B-204ENST00000536782 CLEC3BP05452 202 aa14.76□□□□□ -0.05
TNFRSF1B-204ENST00000536782 CATR1Q13166 79 aa14.76□□□□□ -0.05
TNFRSF1B-204ENST00000536782 OR5H6Q8NGV6 325 aa14.76□□□□□ -0.05
TNFRSF1B-204ENST00000536782 SLC5A7Q9GZV3 580 aa14.76□□□□□ -0.05
TNFRSF1B-204ENST00000536782 MFSD2BA6NFX1 497 aa14.75□□□□□ -0.05
TNFRSF1B-204ENST00000536782 SULT1C2O00338 296 aa14.75□□□□□ -0.05
TNFRSF1B-204ENST00000536782 HPRT1P00492 218 aa14.75□□□□□ -0.05
TNFRSF1B-204ENST00000536782 TAS2R31P59538 309 aa14.75□□□□□ -0.05
TNFRSF1B-204ENST00000536782 OR2B8PP59922 312 aa14.75□□□□□ -0.05
TNFRSF1B-204ENST00000536782 ANKRD55Q3KP44 614 aa14.75□□□□□ -0.05
TNFRSF1B-204ENST00000536782 SLC25A38Q96DW6 304 aa14.75□□□□□ -0.05
TNFRSF1B-204ENST00000536782 SCAF4O95104 1147 aaKnown RBP14.74□□□□□ -0.05
TNFRSF1B-204ENST00000536782 SMIM18P0DKX4 95 aa14.74□□□□□ -0.05
TNFRSF1B-204ENST00000536782 NQO2P16083 231 aa14.74□□□□□ -0.05
TNFRSF1B-204ENST00000536782 FXYD4P59646 89 aa14.74□□□□□ -0.05
TNFRSF1B-204ENST00000536782 POU2AF1Q16633 256 aa14.74□□□□□ -0.05
TNFRSF1B-204ENST00000536782 TM4SF20Q53R12 229 aa14.74□□□□□ -0.05
TNFRSF1B-204ENST00000536782 BTNL8Q6UX41 500 aa14.74□□□□□ -0.05
TNFRSF1B-204ENST00000536782 MARC2Q969Z3 335 aa14.74□□□□□ -0.05
TNFRSF1B-204ENST00000536782 FUNDC2Q9BWH2 189 aa14.74□□□□□ -0.05
TNFRSF1B-204ENST00000536782 COMMD5Q9GZQ3 224 aa14.74□□□□□ -0.05
TNFRSF1B-204ENST00000536782 DIABLOQ9NR28 239 aa14.74□□□□□ -0.05
TNFRSF1B-204ENST00000536782 THYN1Q9P016 225 aa14.74□□□□□ -0.05
TNFRSF1B-204ENST00000536782 TRAV3A0A0B4J244 114 aa14.73□□□□□ -0.05
TNFRSF1B-204ENST00000536782 IGLC7A0M8Q6 106 aa14.73□□□□□ -0.05
TNFRSF1B-204ENST00000536782 UPK2O00526 184 aa14.73□□□□□ -0.05
TNFRSF1B-204ENST00000536782 GPR183P32249 361 aa14.73□□□□□ -0.05
TNFRSF1B-204ENST00000536782 TGFBR1P36897 503 aa14.73□□□□□ -0.05
TNFRSF1B-204ENST00000536782 RPS19P39019 145 aaKnown RBP14.73□□□□□ -0.05
TNFRSF1B-204ENST00000536782 LSM3P62310 102 aaKnown RBP14.73□□□□□ -0.05
TNFRSF1B-204ENST00000536782 UNQ9165/PRO28630Q6UXU0 137 aa14.73□□□□□ -0.05
TNFRSF1B-204ENST00000536782 ZNF502Q8TBZ5 544 aa14.73□□□□□ -0.05
TNFRSF1B-204ENST00000536782 SRSF8Q9BRL6 282 aaKnown RBP14.73□□□□□ -0.05
TNFRSF1B-204ENST00000536782 GGTLC1Q9BX51 225 aa14.73□□□□□ -0.05
TNFRSF1B-204ENST00000536782 AUNIPQ9H7T9 357 aa14.73□□□□□ -0.05
TNFRSF1B-204ENST00000536782 LOC102724200A0A096LPH7 203 aaPredicted RBP14.72□□□□□ -0.05
TNFRSF1B-204ENST00000536782 TRAV25A0A0B4J276 109 aa14.72□□□□□ -0.05
TNFRSF1B-204ENST00000536782 FCER2P06734 321 aa14.72□□□□□ -0.05
TNFRSF1B-204ENST00000536782 C8orf88P0DMB2 117 aa14.72□□□□□ -0.05
TNFRSF1B-204ENST00000536782 CBX5P45973 191 aa14.72□□□□□ -0.05
TNFRSF1B-204ENST00000536782 ZNF585BQ52M93 769 aa14.72□□□□□ -0.05
TNFRSF1B-204ENST00000536782 PLET1Q6UQ28 207 aa14.72□□□□□ -0.05
TNFRSF1B-204ENST00000536782 ZNF818PQ6ZRF7 136 aa14.72□□□□□ -0.05
TNFRSF1B-204ENST00000536782 RBPMS2Q6ZRY4 209 aaKnown RBP14.72□□□□□ -0.05
TNFRSF1B-204ENST00000536782 DMBX1Q8NFW5 382 aa14.72□□□□□ -0.05
TNFRSF1B-204ENST00000536782 OR5AP2Q8NGF4 316 aa14.72□□□□□ -0.05
TNFRSF1B-204ENST00000536782 OR51H1Q8NH63 302 aa14.72□□□□□ -0.05
TNFRSF1B-204ENST00000536782 CD300LFQ8TDQ1 290 aa14.72□□□□□ -0.05
TNFRSF1B-204ENST00000536782 GIMAP1Q8WWP7 306 aa14.72□□□□□ -0.05
TNFRSF1B-204ENST00000536782 PLEKHA2Q9HB19 425 aa14.72□□□□□ -0.05
TNFRSF1B-204ENST00000536782 TMEM140Q9NV12 185 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms