RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	IGLV3-27	P01718	113 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	TTR	P02766	147 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	FABP1	P07148	127 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	CD79A	P11912	226 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	DEFA4	P12838	97 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	CYBA	P13498	195 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	MSN	P26038	577 aa	Known RBP	0.97	□□□□□ -2.25
RDX-215	ENST00000533961	OR10J1	P30954	320 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	CA7	P43166	264 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	REG1B	P48304	166 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	AKR1C2	P52895	323 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	TMEM33	P57088	247 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	PSME3	P61289	254 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	BTN3A2	P78410	334 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	HLA-DRB3	P79483	266 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	RPL19	P84098	196 aa	Known RBP	0.97	□□□□□ -2.25
RDX-215	ENST00000533961	IFITM2	Q01629	132 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	TAF1A	Q15573	450 aa	Predicted RBP	0.97	□□□□□ -2.25
RDX-215	ENST00000533961	ALX1	Q15699	326 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	IAH1	Q2TAA2	248 aa	Predicted RBP	0.97	□□□□□ -2.25
RDX-215	ENST00000533961	LIN52	Q52LA3	116 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	TEX36	Q5VZQ5	186 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	OR10K2	Q6IF99	312 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	ALKAL1	Q6UXT8	129 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	TAC4	Q86UU9	113 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	DEFB125	Q8N687	156 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	TEX47	Q8TBZ9	253 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	FAM172A	Q8WUF8	416 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	BORCS7	Q96B45	105 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	MS4A6E	Q96DS6	147 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	CPNE2	Q96FN4	548 aa	Predicted RBP	0.97	□□□□□ -2.25
RDX-215	ENST00000533961	BTF3L4	Q96K17	158 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	NMNAT3	Q96T66	252 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	DDA1	Q9BW61	102 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	DCSTAMP	Q9H295	470 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	NMNAT1	Q9HAN9	279 aa	Predicted RBP	0.97	□□□□□ -2.25
RDX-215	ENST00000533961	ARMC1	Q9NVT9	282 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	HHLA2	Q9UM44	414 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	GRIN2B	Q13224	1484 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	RTEL1-TNFRSF6B	F6WH68	1400 aa		0.97	□□□□□ -2.25
RDX-215	ENST00000533961	SYNM	O15061	1565 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	TGIF2-C20orf24	A0A0A6YYL0	155 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	EVPLL	A8MZ36	301 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	OR11H12	B2RN74	326 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	EEF1E1-BLOC1S5	C9J1V9	151 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961		H0YJX3	145 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	PSMD12	O00232	456 aa	Predicted RBP	0.96	□□□□□ -2.26
RDX-215	ENST00000533961	BHLHE40	O14503	412 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	OR7C1	O76099	320 aa	Predicted RBP	0.96	□□□□□ -2.26
RDX-215	ENST00000533961	APOM	O95445	188 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	MT-CO2	P00403	227 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	HLA-DQB2	P05538	268 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	BPGM	P07738	259 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	RPSA	P08865	295 aa	Known RBP	0.96	□□□□□ -2.26
RDX-215	ENST00000533961	HIST1H1T	P22492	207 aa	Predicted RBP	0.96	□□□□□ -2.26
RDX-215	ENST00000533961	G0S2	P27469	103 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	OPRM1	P35372	400 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	CCR2	P41597	374 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	CTBP2	P56545	445 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	FGF12	P61328	243 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	TFAM	Q00059	246 aa	Known RBP	0.96	□□□□□ -2.26
RDX-215	ENST00000533961	SLC38A11	Q08AI6	406 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	PMAIP1	Q13794	54 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	RSU1	Q15404	277 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	PLPPR5	Q32ZL2	321 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	C1orf194	Q5T5A4	169 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	HACD4	Q5VWC8	232 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	LPCAT3	Q6P1A2	487 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	SBSN	Q6UWP8	590 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	AMTN	Q6UX39	209 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	SMIM15	Q7Z3B0	74 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	SPATA12	Q7Z6I5	190 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	PHF13	Q86YI8	300 aa	Predicted RBP	0.96	□□□□□ -2.26
RDX-215	ENST00000533961	UBL4B	Q8N7F7	174 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	OR11H2	Q8NH07	326 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	ZNF563	Q8TA94	476 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	NEK7	Q8TDX7	302 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	PYDC1	Q8WXC3	89 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	RNASE6	Q93091	150 aa	Known RBP	0.96	□□□□□ -2.26
RDX-215	ENST00000533961	C12orf43	Q96C57	262 aa	Known RBP	0.96	□□□□□ -2.26
RDX-215	ENST00000533961	DGCR14	Q96DF8	476 aa	Known RBP	0.96	□□□□□ -2.26
RDX-215	ENST00000533961	DCUN1D1	Q96GG9	259 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	SFRP2	Q96HF1	295 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	DIRAS2	Q96HU8	199 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	ANKRD36BP1	Q96IX9	119 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	CEP19	Q96LK0	163 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	TTTY13	Q9BZ97	58 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	TRIM4	Q9C037	500 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	TRABD	Q9H4I3	376 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	CXorf21	Q9HAI6	301 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	MRPL27	Q9P0M9	148 aa	Known RBP	0.96	□□□□□ -2.26
RDX-215	ENST00000533961	DOK5	Q9P104	306 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	0.96	□□□□□ -2.26
RDX-215	ENST00000533961	DENND4B	O75064	1496 aa	Predicted RBP	0.96	□□□□□ -2.26
RDX-215	ENST00000533961	FHAD1	B1AJZ9	1412 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	NUP155	O75694	1391 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	KIF24	Q5T7B8	1368 aa		0.96	□□□□□ -2.26
RDX-215	ENST00000533961	PRRC2B	Q5JSZ5	2229 aa	Known RBP	0.95	□□□□□ -2.26
RDX-215	ENST00000533961	IGLV3-9	A0A075B6K5	115 aa		0.95	□□□□□ -2.26
RDX-215	ENST00000533961	TMSB15B	A0A087X1C1	80 aa		0.95	□□□□□ -2.26

Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms