RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 AQP10Q96PS8 301 aa17.56■□□□□ 0.4
PACSIN3-209ENST00000532457 AIFM2Q9BRQ8 373 aa17.56■□□□□ 0.4
PACSIN3-209ENST00000532457 FOXA2Q9Y261 457 aaPredicted RBP17.56■□□□□ 0.4
PACSIN3-209ENST00000532457 SNAPC5O75971 98 aa17.56■□□□□ 0.4
PACSIN3-209ENST00000532457 RPL12P30050 165 aaKnown RBP17.56■□□□□ 0.4
PACSIN3-209ENST00000532457 ZNF429Q86V71 674 aa17.56■□□□□ 0.4
PACSIN3-209ENST00000532457 INO80EQ8NBZ0 244 aaPredicted RBP17.56■□□□□ 0.4
PACSIN3-209ENST00000532457 TMEM167AQ8TBQ9 72 aa17.56■□□□□ 0.4
PACSIN3-209ENST00000532457 CDC42EP3Q9UKI2 254 aa17.56■□□□□ 0.4
PACSIN3-209ENST00000532457 E7EUB6 86 aa17.55■□□□□ 0.4
PACSIN3-209ENST00000532457 OPN1MWP04001 364 aa17.55■□□□□ 0.4
PACSIN3-209ENST00000532457 OPN1MW2P0DN77 364 aa17.55■□□□□ 0.4
PACSIN3-209ENST00000532457 OPN1MW3P0DN78 364 aa17.55■□□□□ 0.4
PACSIN3-209ENST00000532457 P2RY1P47900 373 aa17.55■□□□□ 0.4
PACSIN3-209ENST00000532457 ARL6Q9H0F7 186 aa17.55■□□□□ 0.4
PACSIN3-209ENST00000532457 TEX50A0A1B0GTY4 177 aa17.54■□□□□ 0.4
PACSIN3-209ENST00000532457 IGSF23A1L1A6 192 aa17.54■□□□□ 0.4
PACSIN3-209ENST00000532457 MOSP00540 346 aa17.54■□□□□ 0.4
PACSIN3-209ENST00000532457 IFNA17P01571 189 aa17.54■□□□□ 0.4
PACSIN3-209ENST00000532457 S100A11P31949 105 aa17.54■□□□□ 0.4
PACSIN3-209ENST00000532457 OR2F1Q13607 317 aa17.54■□□□□ 0.4
PACSIN3-209ENST00000532457 EBI3Q14213 229 aa17.54■□□□□ 0.4
PACSIN3-209ENST00000532457 OPCMLQ14982 345 aa17.54■□□□□ 0.4
PACSIN3-209ENST00000532457 PDLIM3Q53GG5 364 aaPredicted RBP17.54■□□□□ 0.4
PACSIN3-209ENST00000532457 RNF5Q99942 180 aa17.54■□□□□ 0.4
PACSIN3-209ENST00000532457 SLA2Q9H6Q3 261 aa17.54■□□□□ 0.4
PACSIN3-209ENST00000532457 ZNF430Q9H8G1 570 aaPredicted RBP17.54■□□□□ 0.4
PACSIN3-209ENST00000532457 OR51B2Q9Y5P1 312 aa17.54■□□□□ 0.4
PACSIN3-209ENST00000532457 H3BP45 60 aa17.54■□□□□ 0.4
PACSIN3-209ENST00000532457 SPCS3P61009 180 aa17.54■□□□□ 0.4
PACSIN3-209ENST00000532457 NHLH2Q02577 135 aa17.54■□□□□ 0.4
PACSIN3-209ENST00000532457 ZNF345Q14585 488 aa17.54■□□□□ 0.4
PACSIN3-209ENST00000532457 OR2C3Q8N628 320 aa17.54■□□□□ 0.4
PACSIN3-209ENST00000532457 Q8N6K4 173 aa17.54■□□□□ 0.4
PACSIN3-209ENST00000532457 TEX45Q8NA69 505 aa17.54■□□□□ 0.4
PACSIN3-209ENST00000532457 OR52E5Q8NH55 327 aa17.54■□□□□ 0.4
PACSIN3-209ENST00000532457 SMIM8Q96KF7 97 aa17.54■□□□□ 0.4
PACSIN3-209ENST00000532457 RAB40CQ96S21 281 aa17.54■□□□□ 0.4
PACSIN3-209ENST00000532457 TCF19Q9Y242 345 aa17.54■□□□□ 0.4
PACSIN3-209ENST00000532457 SIGLEC9Q9Y336 463 aa17.54■□□□□ 0.4
PACSIN3-209ENST00000532457 SONP18583 2426 aaKnown RBP17.53■□□□□ 0.4
PACSIN3-209ENST00000532457 NSD1Q96L73 2696 aaPredicted RBP17.53■□□□□ 0.4
PACSIN3-209ENST00000532457 FCN1O00602 326 aa17.53■□□□□ 0.4
PACSIN3-209ENST00000532457 TSC22D2O75157 780 aa17.53■□□□□ 0.4
PACSIN3-209ENST00000532457 SRP14P37108 136 aaKnown RBP17.53■□□□□ 0.4
PACSIN3-209ENST00000532457 HSPE1P61604 102 aaKnown RBP17.53■□□□□ 0.4
PACSIN3-209ENST00000532457 VAMP2P63027 116 aa17.53■□□□□ 0.4
PACSIN3-209ENST00000532457 HES1Q14469 280 aa17.53■□□□□ 0.4
PACSIN3-209ENST00000532457 VMA21Q3ZAQ7 101 aa17.53■□□□□ 0.4
PACSIN3-209ENST00000532457 PIFOQ8TCI5 191 aa17.53■□□□□ 0.4
PACSIN3-209ENST00000532457 GON7Q9BXV9 100 aa17.53■□□□□ 0.4
PACSIN3-209ENST00000532457 FBXL15Q9H469 300 aa17.53■□□□□ 0.4
PACSIN3-209ENST00000532457 LYRM2Q9NU23 88 aaPredicted RBP17.53■□□□□ 0.4
PACSIN3-209ENST00000532457 PRNDQ9UKY0 176 aa17.53■□□□□ 0.4
PACSIN3-209ENST00000532457 A0A0D9SG52 128 aa17.52■□□□□ 0.4
PACSIN3-209ENST00000532457 CGB1A6NKQ9 187 aa17.52■□□□□ 0.4
PACSIN3-209ENST00000532457 BPIFB3P59826 476 aa17.52■□□□□ 0.4
PACSIN3-209ENST00000532457 TMEM252Q8N6L7 170 aa17.52■□□□□ 0.4
PACSIN3-209ENST00000532457 OR2T10Q8NGZ9 312 aa17.52■□□□□ 0.4
PACSIN3-209ENST00000532457 OR4A5Q8NH83 315 aa17.52■□□□□ 0.4
PACSIN3-209ENST00000532457 DTD1Q8TEA8 209 aa17.52■□□□□ 0.4
PACSIN3-209ENST00000532457 TSNAXQ99598 290 aaKnown RBP17.52■□□□□ 0.4
PACSIN3-209ENST00000532457 MEGF9Q9H1U4 602 aa17.52■□□□□ 0.4
PACSIN3-209ENST00000532457 PSENENQ9NZ42 101 aa17.52■□□□□ 0.4
PACSIN3-209ENST00000532457 ANK3Q12955 4377 aaKnown RBP17.52■□□□□ 0.39
PACSIN3-209ENST00000532457 A0A1B0GW64 132 aa17.51■□□□□ 0.39
PACSIN3-209ENST00000532457 CEBPZOSA8MTT3 80 aa17.51■□□□□ 0.39
PACSIN3-209ENST00000532457 INAFM1C9JVW0 142 aa17.51■□□□□ 0.39
PACSIN3-209ENST00000532457 PVALBP20472 110 aaPredicted RBP17.51■□□□□ 0.39
PACSIN3-209ENST00000532457 VDAC2P45880 294 aaPredicted RBP17.51■□□□□ 0.39
PACSIN3-209ENST00000532457 CAV2P51636 162 aa17.51■□□□□ 0.39
PACSIN3-209ENST00000532457 RPL8P62917 257 aaKnown RBP17.51■□□□□ 0.39
PACSIN3-209ENST00000532457 SCGB2A2Q13296 93 aa17.51■□□□□ 0.39
PACSIN3-209ENST00000532457 C10orf55Q5SWW7 151 aa17.51■□□□□ 0.39
PACSIN3-209ENST00000532457 THNSL2Q86YJ6 484 aa17.51■□□□□ 0.39
PACSIN3-209ENST00000532457 BCL6BQ8N143 479 aaPredicted RBP17.51■□□□□ 0.39
PACSIN3-209ENST00000532457 NPBQ8NG41 125 aa17.51■□□□□ 0.39
PACSIN3-209ENST00000532457 VSTM2AQ8TAG5 236 aa17.51■□□□□ 0.39
PACSIN3-209ENST00000532457 CLCC1Q96S66 551 aa17.51■□□□□ 0.39
PACSIN3-209ENST00000532457 METTL1Q9UBP6 276 aaKnown RBP17.51■□□□□ 0.39
PACSIN3-209ENST00000532457 WSB1Q9Y6I7 421 aa17.51■□□□□ 0.39
PACSIN3-209ENST00000532457 MTORP42345 2549 aa17.51■□□□□ 0.39
PACSIN3-209ENST00000532457 GPR137BO60478 399 aa17.51■□□□□ 0.39
PACSIN3-209ENST00000532457 MED6O75586 246 aa17.51■□□□□ 0.39
PACSIN3-209ENST00000532457 FSHBP01225 129 aa17.51■□□□□ 0.39
PACSIN3-209ENST00000532457 PRSS8Q16651 343 aa17.51■□□□□ 0.39
PACSIN3-209ENST00000532457 NUP50Q9UKX7 468 aa17.51■□□□□ 0.39
PACSIN3-209ENST00000532457 MXRA5Q9NR99 2828 aa17.5■□□□□ 0.39
PACSIN3-209ENST00000532457 RRHO14718 337 aa17.5■□□□□ 0.39
PACSIN3-209ENST00000532457 SSBP2P81877 361 aaPredicted RBP17.5■□□□□ 0.39
PACSIN3-209ENST00000532457 EWSR1Q01844 656 aaKnown RBP eCLIP17.5■□□□□ 0.39
PACSIN3-209ENST00000532457 MMDQ15546 238 aa17.5■□□□□ 0.39
PACSIN3-209ENST00000532457 OR4C12Q96R67 309 aa17.5■□□□□ 0.39
PACSIN3-209ENST00000532457 CYTL1Q9NRR1 136 aa17.5■□□□□ 0.39
PACSIN3-209ENST00000532457 ZNF257Q9Y2Q1 563 aa17.5■□□□□ 0.39
PACSIN3-209ENST00000532457 TEP1Q99973 2627 aaKnown RBP17.5■□□□□ 0.39
PACSIN3-209ENST00000532457 CST7O76096 145 aa17.49■□□□□ 0.39
PACSIN3-209ENST00000532457 NDUFA3O95167 84 aa17.49■□□□□ 0.39
PACSIN3-209ENST00000532457 NUP62P37198 522 aaPredicted RBP17.49■□□□□ 0.39
PACSIN3-209ENST00000532457 TAS2R30P59541 319 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms