RNA–Protein interactions for RNA: ENST00000530267.5

USP35-204, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2 BASIC

Gene USP35, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-204ENST00000530267 MBP02144 154 aa12.38□□□□□ -0.43
USP35-204ENST00000530267 CD3EP07766 207 aa12.38□□□□□ -0.43
USP35-204ENST00000530267 MDKP21741 143 aaPredicted RBP12.38□□□□□ -0.43
USP35-204ENST00000530267 PAX6P26367 422 aa12.38□□□□□ -0.43
USP35-204ENST00000530267 CASP6P55212 293 aa12.38□□□□□ -0.43
USP35-204ENST00000530267 DLX1P56177 255 aa12.38□□□□□ -0.43
USP35-204ENST00000530267 CD81P60033 236 aa12.38□□□□□ -0.43
USP35-204ENST00000530267 CDSNQ15517 529 aa12.38□□□□□ -0.43
USP35-204ENST00000530267 LRRC10Q5BKY1 277 aa12.38□□□□□ -0.43
USP35-204ENST00000530267 SSMEM1Q8WWF3 244 aa12.38□□□□□ -0.43
USP35-204ENST00000530267 FAM122AQ96E09 287 aa12.38□□□□□ -0.43
USP35-204ENST00000530267 ADTRPQ96IZ2 230 aa12.38□□□□□ -0.43
USP35-204ENST00000530267 TUBA4BQ9H853 241 aa12.38□□□□□ -0.43
USP35-204ENST00000530267 ENY2Q9NPA8 101 aa12.38□□□□□ -0.43
USP35-204ENST00000530267 CSMD1Q96PZ7 3565 aa12.38□□□□□ -0.43
USP35-204ENST00000530267 IFNA1P01562 189 aa12.38□□□□□ -0.43
USP35-204ENST00000530267 RAB5BP61020 215 aa12.38□□□□□ -0.43
USP35-204ENST00000530267 HSPE1P61604 102 aaKnown RBP12.38□□□□□ -0.43
USP35-204ENST00000530267 RTL8BQ17RB0 113 aa12.38□□□□□ -0.43
USP35-204ENST00000530267 HEPN1Q6WQI6 88 aa12.38□□□□□ -0.43
USP35-204ENST00000530267 RPUSD4Q96CM3 377 aaKnown RBP12.38□□□□□ -0.43
USP35-204ENST00000530267 ITPR1Q14643 2758 aa12.38□□□□□ -0.43
USP35-204ENST00000530267 MALRD1Q5VYJ5 2156 aa12.37□□□□□ -0.43
USP35-204ENST00000530267 IGHV1-69-2A0A0G2JMI3 117 aa12.37□□□□□ -0.43
USP35-204ENST00000530267 CA2P00918 260 aa12.37□□□□□ -0.43
USP35-204ENST00000530267 CDC34P49427 236 aaPredicted RBP12.37□□□□□ -0.43
USP35-204ENST00000530267 SNRPEP62304 92 aaKnown RBP12.37□□□□□ -0.43
USP35-204ENST00000530267 CTAG1AP78358 180 aa12.37□□□□□ -0.43
USP35-204ENST00000530267 MEF2BQ02080 365 aaPredicted RBP12.37□□□□□ -0.43
USP35-204ENST00000530267 MIC13Q5XKP0 118 aa12.37□□□□□ -0.43
USP35-204ENST00000530267 RBMS3Q6XE24 437 aaKnown RBP12.37□□□□□ -0.43
USP35-204ENST00000530267 SLC24A4Q8NFF2 622 aa12.37□□□□□ -0.43
USP35-204ENST00000530267 FOXA2Q9Y261 457 aaPredicted RBP12.37□□□□□ -0.43
USP35-204ENST00000530267 SVEP1Q4LDE5 3571 aa12.37□□□□□ -0.43
USP35-204ENST00000530267 PLXNB1O43157 2135 aa12.37□□□□□ -0.43
USP35-204ENST00000530267 PRSS46E5RG02 174 aa12.37□□□□□ -0.43
USP35-204ENST00000530267 J3QR06 171 aa12.37□□□□□ -0.43
USP35-204ENST00000530267 NDUFA2O43678 99 aa12.37□□□□□ -0.43
USP35-204ENST00000530267 NPY1RP25929 384 aa12.37□□□□□ -0.43
USP35-204ENST00000530267 APOBEC3AP31941 199 aaPredicted RBP12.37□□□□□ -0.43
USP35-204ENST00000530267 PSMB3P49720 205 aa12.37□□□□□ -0.43
USP35-204ENST00000530267 MEF2CQ06413 473 aaPredicted RBP12.37□□□□□ -0.43
USP35-204ENST00000530267 ACOT6Q3I5F7 207 aaPredicted RBP12.37□□□□□ -0.43
USP35-204ENST00000530267 PDLIM3Q53GG5 364 aaPredicted RBP12.37□□□□□ -0.43
USP35-204ENST00000530267 SLC35E3Q7Z769 313 aa12.37□□□□□ -0.43
USP35-204ENST00000530267 OR10X1Q8NGY0 326 aa12.37□□□□□ -0.43
USP35-204ENST00000530267 OR4F5Q8NH21 305 aa12.37□□□□□ -0.43
USP35-204ENST00000530267 OR4F4Q96R69 305 aa12.37□□□□□ -0.43
USP35-204ENST00000530267 MGST2Q99735 147 aa12.37□□□□□ -0.43
USP35-204ENST00000530267 BIN3Q9NQY0 253 aa12.37□□□□□ -0.43
USP35-204ENST00000530267 CYB5BO43169 146 aa12.36□□□□□ -0.43
USP35-204ENST00000530267 PAGE4O60829 102 aa12.36□□□□□ -0.43
USP35-204ENST00000530267 SAA1P0DJI8 122 aaPredicted RBP12.36□□□□□ -0.43
USP35-204ENST00000530267 FOLR2P14207 255 aa12.36□□□□□ -0.43
USP35-204ENST00000530267 UBE2G2P60604 165 aa12.36□□□□□ -0.43
USP35-204ENST00000530267 ARSJQ5FYB0 599 aaPredicted RBP12.36□□□□□ -0.43
USP35-204ENST00000530267 HARBI1Q96MB7 349 aa12.36□□□□□ -0.43
USP35-204ENST00000530267 A0A1W2PPV4 95 aa12.35□□□□□ -0.43
USP35-204ENST00000530267 SIAH2O43255 324 aa12.35□□□□□ -0.43
USP35-204ENST00000530267 LOXP28300 417 aaPredicted RBP12.35□□□□□ -0.43
USP35-204ENST00000530267 CHRNB4P30926 498 aa12.35□□□□□ -0.43
USP35-204ENST00000530267 CA7P43166 264 aa12.35□□□□□ -0.43
USP35-204ENST00000530267 RPS10P46783 165 aaKnown RBP12.35□□□□□ -0.43
USP35-204ENST00000530267 MOB3BQ86TA1 216 aa12.35□□□□□ -0.43
USP35-204ENST00000530267 OR10W1Q8NGF6 305 aa12.35□□□□□ -0.43
USP35-204ENST00000530267 Q8WTZ3 238 aa12.35□□□□□ -0.43
USP35-204ENST00000530267 C1orf159Q96HA4 380 aa12.35□□□□□ -0.43
USP35-204ENST00000530267 P2RX4Q99571 388 aa12.35□□□□□ -0.43
USP35-204ENST00000530267 SMIM7Q9BQ49 75 aa12.35□□□□□ -0.43
USP35-204ENST00000530267 PXMP4Q9Y6I8 212 aa12.35□□□□□ -0.43
USP35-204ENST00000530267 TGIF2-C20orf24A0A0A6YYL0 155 aa12.35□□□□□ -0.43
USP35-204ENST00000530267 SOX15O60248 233 aa12.35□□□□□ -0.43
USP35-204ENST00000530267 YIF1AO95070 293 aa12.35□□□□□ -0.43
USP35-204ENST00000530267 WDR25Q64LD2 544 aaPredicted RBP12.35□□□□□ -0.43
USP35-204ENST00000530267 ZNF833PQ6ZTB9 187 aa12.35□□□□□ -0.43
USP35-204ENST00000530267 SSX8Q7RTT4 187 aa12.35□□□□□ -0.43
USP35-204ENST00000530267 GGTLC1Q9BX51 225 aa12.35□□□□□ -0.43
USP35-204ENST00000530267 PLEKHA3Q9HB20 300 aa12.35□□□□□ -0.43
USP35-204ENST00000530267 NAV3Q8IVL0 2385 aa12.34□□□□□ -0.43
USP35-204ENST00000530267 TNFRSF13BO14836 293 aaPredicted RBP12.34□□□□□ -0.43
USP35-204ENST00000530267 CXCL1P09341 107 aa12.34□□□□□ -0.43
USP35-204ENST00000530267 KIAA0141Q14154 515 aaPredicted RBP12.34□□□□□ -0.43
USP35-204ENST00000530267 RNF212Q495C1 297 aa12.34□□□□□ -0.43
USP35-204ENST00000530267 MUC15Q8N387 334 aa12.34□□□□□ -0.43
USP35-204ENST00000530267 PRNDQ9UKY0 176 aa12.34□□□□□ -0.43
USP35-204ENST00000530267 UPK2O00526 184 aa12.33□□□□□ -0.43
USP35-204ENST00000530267 LY6HO94772 140 aa12.33□□□□□ -0.43
USP35-204ENST00000530267 S100A6P06703 90 aa12.33□□□□□ -0.43
USP35-204ENST00000530267 ELOBQ15370 118 aa12.33□□□□□ -0.43
USP35-204ENST00000530267 ADIRFQ15847 76 aa12.33□□□□□ -0.43
USP35-204ENST00000530267 YPEL4Q96NS1 127 aa12.33□□□□□ -0.43
USP35-204ENST00000530267 SSX3Q99909 188 aa12.33□□□□□ -0.43
USP35-204ENST00000530267 TMEM204Q9BSN7 226 aa12.33□□□□□ -0.43
USP35-204ENST00000530267 SDF2L1Q9HCN8 221 aa12.33□□□□□ -0.43
USP35-204ENST00000530267 A0A087WWC5 75 aa12.33□□□□□ -0.44
USP35-204ENST00000530267 TEX50A0A1B0GTY4 177 aa12.33□□□□□ -0.44
USP35-204ENST00000530267 B9A039 149 aa12.33□□□□□ -0.44
USP35-204ENST00000530267 H0YJW9 148 aa12.33□□□□□ -0.44
USP35-204ENST00000530267 KBTBD11O94819 623 aa12.33□□□□□ -0.44
USP35-204ENST00000530267 LY86O95711 162 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms