RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 AGPAT2O15120 278 aa2.56□□□□□ -2
CD44-217ENST00000525348 SYNGR1O43759 233 aa2.56□□□□□ -2
CD44-217ENST00000525348 TACSTD2P09758 323 aa2.56□□□□□ -2
CD44-217ENST00000525348 CT45A6P0DMU7 189 aa2.56□□□□□ -2
CD44-217ENST00000525348 CT45A5P0DMU8 189 aa2.56□□□□□ -2
CD44-217ENST00000525348 CT45A7P0DMV0 189 aa2.56□□□□□ -2
CD44-217ENST00000525348 ATF1P18846 271 aa2.56□□□□□ -2
CD44-217ENST00000525348 ORM2P19652 201 aa2.56□□□□□ -2
CD44-217ENST00000525348 MDKP21741 143 aaPredicted RBP2.56□□□□□ -2
CD44-217ENST00000525348 EVI2AP22794 236 aa2.56□□□□□ -2
CD44-217ENST00000525348 NFYAP23511 347 aaPredicted RBP2.56□□□□□ -2
CD44-217ENST00000525348 CTRLP40313 264 aa2.56□□□□□ -2
CD44-217ENST00000525348 POLR2HP52434 150 aaKnown RBP2.56□□□□□ -2
CD44-217ENST00000525348 UBA52P62987 128 aaKnown RBP2.56□□□□□ -2
CD44-217ENST00000525348 SLC35A1P78382 337 aa2.56□□□□□ -2
CD44-217ENST00000525348 PRDX4Q13162 271 aa2.56□□□□□ -2
CD44-217ENST00000525348 PPP1R1AQ13522 171 aa2.56□□□□□ -2
CD44-217ENST00000525348 GUSBP1Q15486 140 aa2.56□□□□□ -2
CD44-217ENST00000525348 HIST3H3Q16695 136 aa2.56□□□□□ -2
CD44-217ENST00000525348 CT45A1Q5HYN5 189 aa2.56□□□□□ -2
CD44-217ENST00000525348 OTPQ5XKR4 325 aa2.56□□□□□ -2
CD44-217ENST00000525348 AMMECR1LQ6DCA0 310 aa2.56□□□□□ -2
CD44-217ENST00000525348 OR2T2Q6IF00 324 aa2.56□□□□□ -2
CD44-217ENST00000525348 OR10K2Q6IF99 312 aa2.56□□□□□ -2
CD44-217ENST00000525348 ARL9Q6T311 187 aa2.56□□□□□ -2
CD44-217ENST00000525348 EPGNQ6UW88 154 aa2.56□□□□□ -2
CD44-217ENST00000525348 CLEC20AQ6ZU45 233 aa2.56□□□□□ -2
CD44-217ENST00000525348 SLC25A26Q70HW3 274 aa2.56□□□□□ -2
CD44-217ENST00000525348 C9orf40Q8IXQ3 194 aa2.56□□□□□ -2
CD44-217ENST00000525348 SAXO1Q8IYX7 474 aa2.56□□□□□ -2
CD44-217ENST00000525348 FAM24BQ8N5W8 94 aa2.56□□□□□ -2
CD44-217ENST00000525348 NFAM1Q8NET5 270 aaPredicted RBP2.56□□□□□ -2
CD44-217ENST00000525348 OR52E2Q8NGJ4 325 aa2.56□□□□□ -2
CD44-217ENST00000525348 CT45A3Q8NHU0 189 aa2.56□□□□□ -2
CD44-217ENST00000525348 ACER1Q8TDN7 264 aa2.56□□□□□ -2
CD44-217ENST00000525348 THEM6Q8WUY1 208 aa2.56□□□□□ -2
CD44-217ENST00000525348 OR5P3Q8WZ94 311 aa2.56□□□□□ -2
CD44-217ENST00000525348 LRRC58Q96CX6 371 aa2.56□□□□□ -2
CD44-217ENST00000525348 MUCL1Q96DR8 90 aa2.56□□□□□ -2
CD44-217ENST00000525348 ZMYND19Q96E35 227 aaPredicted RBP2.56□□□□□ -2
CD44-217ENST00000525348 TIMD4Q96H15 378 aa2.56□□□□□ -2
CD44-217ENST00000525348 ZNF681Q96N22 645 aa2.56□□□□□ -2
CD44-217ENST00000525348 CIB3Q96Q77 187 aaPredicted RBP2.56□□□□□ -2
CD44-217ENST00000525348 OR4K3Q96R72 315 aa2.56□□□□□ -2
CD44-217ENST00000525348 SDF2Q99470 211 aa2.56□□□□□ -2
CD44-217ENST00000525348 PITX2Q99697 317 aa2.56□□□□□ -2
CD44-217ENST00000525348 RASL11BQ9BPW5 248 aa2.56□□□□□ -2
CD44-217ENST00000525348 ANAPC13Q9BS18 74 aa2.56□□□□□ -2
CD44-217ENST00000525348 DERL1Q9BUN8 251 aa2.56□□□□□ -2
CD44-217ENST00000525348 PBDC1Q9BVG4 233 aa2.56□□□□□ -2
CD44-217ENST00000525348 CHIAQ9BZP6 476 aa2.56□□□□□ -2
CD44-217ENST00000525348 RNASE7Q9H1E1 156 aaKnown RBP2.56□□□□□ -2
CD44-217ENST00000525348 DUSP21Q9H596 190 aa2.56□□□□□ -2
CD44-217ENST00000525348 NPVFQ9HCQ7 196 aa2.56□□□□□ -2
CD44-217ENST00000525348 TMEM100Q9NV29 134 aa2.56□□□□□ -2
CD44-217ENST00000525348 MARCH5Q9NX47 278 aa2.56□□□□□ -2
CD44-217ENST00000525348 BET1LQ9NYM9 111 aa2.56□□□□□ -2
CD44-217ENST00000525348 DNAJC27Q9NZQ0 273 aa2.56□□□□□ -2
CD44-217ENST00000525348 ZNF222Q9UK12 451 aa2.56□□□□□ -2
CD44-217ENST00000525348 PRNDQ9UKY0 176 aa2.56□□□□□ -2
CD44-217ENST00000525348 CES1P1Q9UKY3 287 aa2.56□□□□□ -2
CD44-217ENST00000525348 FUT9Q9Y231 359 aa2.56□□□□□ -2
CD44-217ENST00000525348 MRPS16Q9Y3D3 137 aaKnown RBP2.56□□□□□ -2
CD44-217ENST00000525348 RPL36Q9Y3U8 105 aaKnown RBP2.56□□□□□ -2
CD44-217ENST00000525348 TICRRQ7Z2Z1 1910 aa2.56□□□□□ -2
CD44-217ENST00000525348 BAZ2AQ9UIF9 1905 aaKnown RBP2.56□□□□□ -2
CD44-217ENST00000525348 LOC102725191A0A1B0GVB3 256 aa2.55□□□□□ -2
CD44-217ENST00000525348 C9JAW5 83 aa2.55□□□□□ -2
CD44-217ENST00000525348 F5H5P2 479 aa2.55□□□□□ -2
CD44-217ENST00000525348 K7ENP7 123 aa2.55□□□□□ -2
CD44-217ENST00000525348 SIRPB1O00241 398 aa2.55□□□□□ -2
CD44-217ENST00000525348 GABRPO00591 440 aa2.55□□□□□ -2
CD44-217ENST00000525348 NME4O00746 187 aa2.55□□□□□ -2
CD44-217ENST00000525348 TAAR5O14804 337 aa2.55□□□□□ -2
CD44-217ENST00000525348 LYRM1O43325 122 aa2.55□□□□□ -2
CD44-217ENST00000525348 PGLYRP1O75594 196 aaPredicted RBP2.55□□□□□ -2
CD44-217ENST00000525348 OR2A4O95047 310 aa2.55□□□□□ -2
CD44-217ENST00000525348 C1orf105O95561 183 aa2.55□□□□□ -2
CD44-217ENST00000525348 KLF8O95600 359 aaPredicted RBP2.55□□□□□ -2
CD44-217ENST00000525348 IGF1P05019 195 aa2.55□□□□□ -2
CD44-217ENST00000525348 MMP7P09237 267 aaPredicted RBP2.55□□□□□ -2
CD44-217ENST00000525348 TRGC1P0CF51 173 aa2.55□□□□□ -2
CD44-217ENST00000525348 SMIM10L2AP0DMW4 78 aa2.55□□□□□ -2
CD44-217ENST00000525348 SMIM10L2BP0DMW5 78 aa2.55□□□□□ -2
CD44-217ENST00000525348 LINC00694P0DN24 101 aa2.55□□□□□ -2
CD44-217ENST00000525348 BCKDHAP12694 445 aa2.55□□□□□ -2
CD44-217ENST00000525348 ANK1P16157 1881 aa2.55□□□□□ -2
CD44-217ENST00000525348 CDK2P24941 298 aa2.55□□□□□ -2
CD44-217ENST00000525348 LOXP28300 417 aaPredicted RBP2.55□□□□□ -2
CD44-217ENST00000525348 PYCR1P32322 319 aa2.55□□□□□ -2
CD44-217ENST00000525348 RPA3P35244 121 aaPredicted RBP2.55□□□□□ -2
CD44-217ENST00000525348 LEPP41159 167 aa2.55□□□□□ -2
CD44-217ENST00000525348 TAS2R20P59543 309 aa2.55□□□□□ -2
CD44-217ENST00000525348 HSPE1P61604 102 aaKnown RBP2.55□□□□□ -2
CD44-217ENST00000525348 GNG5P63218 68 aa2.55□□□□□ -2
CD44-217ENST00000525348 SLC35B1P78383 322 aa2.55□□□□□ -2
CD44-217ENST00000525348 HMGN3Q15651 99 aa2.55□□□□□ -2
CD44-217ENST00000525348 PRR4Q16378 134 aa2.55□□□□□ -2
CD44-217ENST00000525348 SSX1Q16384 188 aa2.55□□□□□ -2
CD44-217ENST00000525348 IL17AQ16552 155 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms