RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 GABARAPO95166 117 aa12.99□□□□□ -0.33
SQLE-205ENST00000521232 AREGP15514 252 aa12.99□□□□□ -0.33
SQLE-205ENST00000521232 F2RP25116 425 aa12.99□□□□□ -0.33
SQLE-205ENST00000521232 HLA-DMAP28067 261 aa12.99□□□□□ -0.33
SQLE-205ENST00000521232 HRH1P35367 487 aa12.99□□□□□ -0.33
SQLE-205ENST00000521232 OR2B8PP59922 312 aa12.99□□□□□ -0.33
SQLE-205ENST00000521232 C19orf35Q6ZS72 473 aa12.99□□□□□ -0.33
SQLE-205ENST00000521232 Q8N1Y9 231 aa12.99□□□□□ -0.33
SQLE-205ENST00000521232 NAA50Q9GZZ1 169 aaKnown RBP12.99□□□□□ -0.33
SQLE-205ENST00000521232 COMMD9Q9P000 198 aa12.99□□□□□ -0.33
SQLE-205ENST00000521232 FBXL7Q9UJT9 491 aa12.99□□□□□ -0.33
SQLE-205ENST00000521232 H0Y980 276 aa12.98□□□□□ -0.33
SQLE-205ENST00000521232 S1PR2O95136 353 aa12.98□□□□□ -0.33
SQLE-205ENST00000521232 DHFRP00374 187 aa12.98□□□□□ -0.33
SQLE-205ENST00000521232 MECP2P51608 486 aaKnown RBP12.98□□□□□ -0.33
SQLE-205ENST00000521232 CMTM1Q8IZ96 169 aa12.98□□□□□ -0.33
SQLE-205ENST00000521232 CADM3Q8N126 398 aa12.98□□□□□ -0.33
SQLE-205ENST00000521232 FXYD6Q9H0Q3 95 aa12.98□□□□□ -0.33
SQLE-205ENST00000521232 TMEM140Q9NV12 185 aa12.98□□□□□ -0.33
SQLE-205ENST00000521232 PEMTQ9UBM1 199 aa12.98□□□□□ -0.33
SQLE-205ENST00000521232 DNAH7Q8WXX0 4024 aa12.97□□□□□ -0.33
SQLE-205ENST00000521232 GPR31O00270 319 aa12.97□□□□□ -0.33
SQLE-205ENST00000521232 NDUFB8O95169 186 aa12.97□□□□□ -0.33
SQLE-205ENST00000521232 RLN1P04808 185 aa12.97□□□□□ -0.33
SQLE-205ENST00000521232 HIST1H1BP16401 226 aaKnown RBP12.97□□□□□ -0.33
SQLE-205ENST00000521232 ZNF182P17025 639 aaPredicted RBP12.97□□□□□ -0.33
SQLE-205ENST00000521232 MZT2AQ6P582 158 aa12.97□□□□□ -0.33
SQLE-205ENST00000521232 SNX29P2Q8IUI4 249 aa12.97□□□□□ -0.33
SQLE-205ENST00000521232 SBSPONQ8IVN8 264 aa12.97□□□□□ -0.33
SQLE-205ENST00000521232 DMBX1Q8NFW5 382 aa12.97□□□□□ -0.33
SQLE-205ENST00000521232 DGCR14Q96DF8 476 aaKnown RBP12.97□□□□□ -0.33
SQLE-205ENST00000521232 SRSF8Q9BRL6 282 aaKnown RBP12.97□□□□□ -0.33
SQLE-205ENST00000521232 COMMD5Q9GZQ3 224 aa12.97□□□□□ -0.33
SQLE-205ENST00000521232 NBEAL2Q6ZNJ1 2754 aa12.96□□□□□ -0.33
SQLE-205ENST00000521232 IGLV11-55A0A075B6I3 123 aa12.96□□□□□ -0.33
SQLE-205ENST00000521232 GGCTO75223 188 aaKnown RBP12.96□□□□□ -0.33
SQLE-205ENST00000521232 FRMD6-AS1P0C7T7 363 aa12.96□□□□□ -0.33
SQLE-205ENST00000521232 RCVRNP35243 200 aa12.96□□□□□ -0.33
SQLE-205ENST00000521232 TSPAN5P62079 268 aa12.96□□□□□ -0.33
SQLE-205ENST00000521232 ZNF585BQ52M93 769 aa12.96□□□□□ -0.33
SQLE-205ENST00000521232 GPR107Q5VW38 600 aa12.96□□□□□ -0.33
SQLE-205ENST00000521232 LPCAT3Q6P1A2 487 aa12.96□□□□□ -0.33
SQLE-205ENST00000521232 FCAMRQ8WWV6 532 aa12.96□□□□□ -0.33
SQLE-205ENST00000521232 AP3S1Q92572 193 aa12.96□□□□□ -0.33
SQLE-205ENST00000521232 IGLC7A0M8Q6 106 aa12.95□□□□□ -0.34
SQLE-205ENST00000521232 MARCH11A6NNE9 402 aa12.95□□□□□ -0.34
SQLE-205ENST00000521232 A8MZ25 164 aa12.95□□□□□ -0.34
SQLE-205ENST00000521232 PPP5D1E7EU14 171 aa12.95□□□□□ -0.34
SQLE-205ENST00000521232 REG1AP05451 166 aa12.95□□□□□ -0.34
SQLE-205ENST00000521232 DEFA4P12838 97 aa12.95□□□□□ -0.34
SQLE-205ENST00000521232 LPAR6P43657 344 aa12.95□□□□□ -0.34
SQLE-205ENST00000521232 ADAMTSL5Q6ZMM2 481 aa12.95□□□□□ -0.34
SQLE-205ENST00000521232 THAP7Q9BT49 309 aaPredicted RBP12.95□□□□□ -0.34
SQLE-205ENST00000521232 MRPS26Q9BYN8 205 aaKnown RBP12.95□□□□□ -0.34
SQLE-205ENST00000521232 TEX50A0A1B0GTY4 177 aa12.94□□□□□ -0.34
SQLE-205ENST00000521232 FAM25AB3EWG3 89 aa12.94□□□□□ -0.34
SQLE-205ENST00000521232 FAM25CB3EWG5 89 aa12.94□□□□□ -0.34
SQLE-205ENST00000521232 FAM25GB3EWG6 89 aa12.94□□□□□ -0.34
SQLE-205ENST00000521232 LGALS9O00182 355 aa12.94□□□□□ -0.34
SQLE-205ENST00000521232 TPPPO94811 219 aa12.94□□□□□ -0.34
SQLE-205ENST00000521232 RPA2P15927 270 aa12.94□□□□□ -0.34
SQLE-205ENST00000521232 ALDH3B2P48448 385 aa12.94□□□□□ -0.34
SQLE-205ENST00000521232 UCP3P55916 312 aa12.94□□□□□ -0.34
SQLE-205ENST00000521232 ERVK-16P61578 105 aa12.94□□□□□ -0.34
SQLE-205ENST00000521232 THOC7Q6I9Y2 204 aaKnown RBP12.94□□□□□ -0.34
SQLE-205ENST00000521232 LCN12Q6JVE5 192 aa12.94□□□□□ -0.34
SQLE-205ENST00000521232 GPHB5Q86YW7 130 aa12.94□□□□□ -0.34
SQLE-205ENST00000521232 Q8N402 240 aa12.94□□□□□ -0.34
SQLE-205ENST00000521232 OR2K2Q8NGT1 345 aa12.94□□□□□ -0.34
SQLE-205ENST00000521232 EEF1AKMT3Q96AZ1 226 aa12.94□□□□□ -0.34
SQLE-205ENST00000521232 CCDC140Q96MF4 163 aa12.94□□□□□ -0.34
SQLE-205ENST00000521232 QTRT1Q9BXR0 403 aaKnown RBP12.94□□□□□ -0.34
SQLE-205ENST00000521232 FAM212BQ9NTI7 297 aaPredicted RBP12.94□□□□□ -0.34
SQLE-205ENST00000521232 C19orf73Q9NVV2 129 aa12.94□□□□□ -0.34
SQLE-205ENST00000521232 TRBV7-1A0A0A6YYK4 115 aa12.93□□□□□ -0.34
SQLE-205ENST00000521232 OR2C1O95371 312 aa12.93□□□□□ -0.34
SQLE-205ENST00000521232 KRASP01116 189 aa12.93□□□□□ -0.34
SQLE-205ENST00000521232 IGHV3-23P01764 117 aa12.93□□□□□ -0.34
SQLE-205ENST00000521232 HLA-AP01891 365 aaKnown RBP12.93□□□□□ -0.34
SQLE-205ENST00000521232 TRAPPC2P0DI81 140 aa12.93□□□□□ -0.34
SQLE-205ENST00000521232 TRAPPC2BP0DI82 140 aa12.93□□□□□ -0.34
SQLE-205ENST00000521232 IGHV4-30-4P0DP06 118 aa12.93□□□□□ -0.34
SQLE-205ENST00000521232 CLEC19AQ6UXS0 136 aa12.93□□□□□ -0.34
SQLE-205ENST00000521232 HSD17B13Q7Z5P4 300 aaPredicted RBP12.93□□□□□ -0.34
SQLE-205ENST00000521232 OR10W1Q8NGF6 305 aa12.93□□□□□ -0.34
SQLE-205ENST00000521232 CXorf58Q96LI9 332 aa12.93□□□□□ -0.34
SQLE-205ENST00000521232 NDUFA4L2Q9NRX3 87 aa12.93□□□□□ -0.34
SQLE-205ENST00000521232 KLK11Q9UBX7 282 aa12.93□□□□□ -0.34
SQLE-205ENST00000521232 IZUMO1RA6ND01 250 aa12.92□□□□□ -0.34
SQLE-205ENST00000521232 S100GP29377 79 aa12.92□□□□□ -0.34
SQLE-205ENST00000521232 G6PCP35575 357 aa12.92□□□□□ -0.34
SQLE-205ENST00000521232 ARL3P36405 182 aa12.92□□□□□ -0.34
SQLE-205ENST00000521232 PHLDA2Q53GA4 152 aa12.92□□□□□ -0.34
SQLE-205ENST00000521232 GPR141Q7Z602 305 aa12.92□□□□□ -0.34
SQLE-205ENST00000521232 SGPP2Q8IWX5 399 aa12.92□□□□□ -0.34
SQLE-205ENST00000521232 SLC38A6Q8IZM9 456 aa12.92□□□□□ -0.34
SQLE-205ENST00000521232 OR1L8Q8NGR8 309 aa12.92□□□□□ -0.34
SQLE-205ENST00000521232 THYN1Q9P016 225 aa12.92□□□□□ -0.34
SQLE-205ENST00000521232 EXTL2Q9UBQ6 330 aa12.92□□□□□ -0.34
SQLE-205ENST00000521232 S4R3C0 116 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms