RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 HES5Q5TA89 166 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 SAMD13Q5VXD3 122 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 DUX4L9Q6RFH8 374 aaPredicted RBP2.23□□□□□ -2.05
MCF2-208ENST00000519895 ETV3LQ6ZN32 361 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 LINC00336Q6ZUF6 198 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 RNF144BQ7Z419 303 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 C6orf201Q7Z4U5 140 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 CMTM1Q8IZ96 169 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 SLC24A4Q8NFF2 622 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 OR4F17Q8NGA8 305 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 OR5H2Q8NGV7 314 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 OR1L1Q8NH94 360 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 OR2T6Q8NHC8 308 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 TERB2Q8NHR7 220 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 NOL4LQ96MY1 436 aaPredicted RBP2.23□□□□□ -2.05
MCF2-208ENST00000519895 OR4F4Q96R69 305 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 TTTY10Q9BZA0 68 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 FXYD6Q9H0Q3 95 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 BANF2Q9H503 90 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 SLC2A9Q9NRM0 540 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 SDHAF2Q9NX18 166 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 IL36RNQ9UBH0 155 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 GNG12Q9UBI6 72 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 DUX4Q9UBX2 424 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 SCP2D1Q9UJQ7 156 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 GPR132Q9UNW8 380 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 PKHD1P08F94 4074 aa2.23□□□□□ -2.05
MCF2-208ENST00000519895 DMBT1Q9UGM3 2413 aaPredicted RBP2.23□□□□□ -2.05
MCF2-208ENST00000519895 SAA2-SAA4A0A096LPE2 208 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 MEIOCA2RUB1 952 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 CGB1A6NKQ9 187 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 ANKRD65E5RJM6 399 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 HOXA3O43365 443 aaPredicted RBP2.22□□□□□ -2.05
MCF2-208ENST00000519895 DHFRP00374 187 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 EIF4EP06730 217 aaKnown RBP2.22□□□□□ -2.05
MCF2-208ENST00000519895 SAA2P0DJI9 122 aaPredicted RBP2.22□□□□□ -2.05
MCF2-208ENST00000519895 NQO2P16083 231 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 ELK1P19419 428 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 PSMB8P28062 276 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 CEACAM6P40199 344 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 VDAC2P45880 294 aaPredicted RBP2.22□□□□□ -2.05
MCF2-208ENST00000519895 OR10A3P58181 314 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 RAP2BP61225 183 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 EGFEM1PQ0D2K5 195 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 ASAH1Q13510 395 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 ATXN7L3Q14CW9 347 aaPredicted RBP2.22□□□□□ -2.05
MCF2-208ENST00000519895 PSG5Q15238 335 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 BOLLQ8N9W6 283 aaKnown RBP2.22□□□□□ -2.05
MCF2-208ENST00000519895 BPIFCQ8NFQ6 507 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 OR5H6Q8NGV6 325 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 LINC01006Q8NI28 216 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 C2CD4CQ8TF44 421 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 CAPSLQ8WWF8 208 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 MARC2Q969Z3 335 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 FLYWCH2Q96CP2 140 aaKnown RBP2.22□□□□□ -2.05
MCF2-208ENST00000519895 C5orf30Q96GV9 206 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 RASL11BQ9BPW5 248 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 SRRQ9GZT4 340 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 ELL3Q9HB65 397 aaPredicted RBP2.22□□□□□ -2.05
MCF2-208ENST00000519895 CHMP1AQ9HD42 196 aaPredicted RBP2.22□□□□□ -2.05
MCF2-208ENST00000519895 AKIP1Q9NQ31 210 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 IFT46Q9NQC8 304 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 V9GYH0 126 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 TRAV18A0A075B6X5 111 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 F8WDY8 70 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 K7EMT4 169 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 K7EPK0 472 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 UPK2O00526 184 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 SCGB2A1O75556 95 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 MMP23AO75900 390 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 GSTT2P0CG29 244 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 F2RP25116 425 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 RPL23AP62750 156 aaKnown RBP2.22□□□□□ -2.05
MCF2-208ENST00000519895 EXOSC2Q13868 293 aaKnown RBP2.22□□□□□ -2.05
MCF2-208ENST00000519895 ZNF846Q147U1 533 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 SPCS2Q15005 226 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 PRSS8Q16651 343 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 ODF4Q2M2E3 257 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 MRGPRG-AS1Q2M3A8 158 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 LBHQ53QV2 105 aaPredicted RBP2.22□□□□□ -2.05
MCF2-208ENST00000519895 PXDC1Q5TGL8 231 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 TEX38Q6PEX7 206 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 SPSB3Q6PJ21 355 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 CLVS1Q8IUQ0 354 aaPredicted RBP2.22□□□□□ -2.05
MCF2-208ENST00000519895 SAMD12Q8N8I0 201 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 ZNF383Q8NA42 475 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 DUSP18Q8NEJ0 188 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 OR4X2Q8NGF9 303 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 OR10K1Q8NGX5 313 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 OR6F1Q8NGZ6 308 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 OR8U1Q8NH10 309 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 OR4K15Q8NH41 348 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 GLMPQ8WWB7 406 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 TMEM203Q969S6 136 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 FYTTD1Q96QD9 318 aaKnown RBP2.22□□□□□ -2.05
MCF2-208ENST00000519895 ZNF436Q9C0F3 470 aaPredicted RBP2.22□□□□□ -2.05
MCF2-208ENST00000519895 TMEM14BQ9NUH8 114 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 SIGLEC9Q9Y336 463 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 RNF213Q63HN8 5207 aa2.22□□□□□ -2.05
MCF2-208ENST00000519895 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms