RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 HTR2BP41595 481 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 RPS10P46783 165 aaKnown RBP3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 NDPQ00604 133 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 OR8B8Q15620 311 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 KCNJ8Q15842 424 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 MPV17L2Q567V2 206 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 AP1ARQ63HQ0 302 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 UBE2DNLQ8IWF7 75 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 FAM9CQ8IZT9 166 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 LGI3Q8N145 548 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 ZIC4Q8N9L1 334 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 CDRT4Q8N9R6 151 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 NECAP1Q8NC96 275 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 OR8G5Q8NG78 346 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 OR11H1Q8NG94 326 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 ZNF675Q8TD23 568 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 C10orf82Q8WW14 230 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 H1FXQ92522 213 aaKnown RBP3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 ADTRPQ96IZ2 230 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 OR4C12Q96R67 309 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 TMEM243Q9BU79 118 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 PLEKHA1Q9HB21 404 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 UBQLN4Q9NRR5 601 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 TAS2R13Q9NYV9 303 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 DNAJC27Q9NZQ0 273 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 POFUT2Q9Y2G5 429 aa3.06□□□□□ -1.92
HMGB1P23-201ENST00000518743 TRAV8-6A0A0B4J262 113 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 A0A1B0GVX0 72 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 CENPBD1B2RD01 187 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 KRBOX1C9JBD0 128 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 J3QT63 122 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 K7EN84 100 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 APOC4-APOC2K7ER74 178 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 TRBV12-3P01733 135 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 IGHV3-11P01762 117 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 APOC2P02655 101 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 SNRPAP09012 282 aaKnown RBP3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 CCR6P51684 374 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 AQP5P55064 265 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 CDK5Q00535 292 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 FLOT2Q14254 428 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 MAPRE2Q15555 327 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 SMUG1Q53HV7 270 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 C2orf83Q53S99 150 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 TTC32Q5I0X7 151 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 ZNF691Q5VV52 312 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 ZNF767PQ75MW2 155 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 MTERF4Q7Z6M4 381 aaKnown RBP3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 CYP4Z1Q86W10 505 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 C15orf56Q8N910 161 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 ZNF738Q8NE65 137 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 OR5W2Q8NH69 310 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 ZNF563Q8TA94 476 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 UBALD1Q8TB05 177 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 SLC25A40Q8TBP6 338 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 KLF14Q8TD94 323 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 DEFB104AQ8WTQ1 72 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 FLYWCH2Q96CP2 140 aaKnown RBP3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 CHMP6Q96FZ7 201 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 NDFIP1Q9BT67 221 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 SAMD10Q9BYL1 202 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 LINC00470Q9BZP3 86 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 OR2J1Q9GZK6 312 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 SLC38A1Q9H2H9 487 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 EXOSC4Q9NPD3 245 aaKnown RBP3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 DIABLOQ9NR28 239 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 ENOPH1Q9UHY7 261 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 VAX2Q9UIW0 290 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 APLNQ9ULZ1 77 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 SIGLEC7Q9Y286 467 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 WSB1Q9Y6I7 421 aa3.05□□□□□ -1.92
HMGB1P23-201ENST00000518743 LRP1Q07954 4544 aaKnown RBP3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 IGLV4-69A0A075B6H9 119 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 A0A1W2PQD3 144 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 TMEM223A0PJW6 202 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 RPL36A-HNRNPH2H7BZ11 118 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 LGALS9O00182 355 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 UPK2O00526 184 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 TGOLN2O43493 480 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 SCO1O75880 301 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 VAMP5O95183 116 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 PDYNP01213 254 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 IFNA10P01566 189 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 APCSP02743 223 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 PSG2P11465 335 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 PSMB9P28065 219 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 GALR1P47211 349 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 SRP9P49458 86 aaKnown RBP3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 UBE2KP61086 200 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 ESRRGP62508 458 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 TNFRSF9Q07011 255 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 COTL1Q14019 142 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 YIF1BQ5BJH7 314 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 RBM48Q5RL73 367 aaKnown RBP3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 AHSA2Q719I0 299 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 PAGE2Q7Z2X7 111 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 PGAM4Q8N0Y7 254 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 Q8N7P7 452 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 CYB561A3Q8NBI2 242 aa3.04□□□□□ -1.92
HMGB1P23-201ENST00000518743 OR11L1Q8NGX0 322 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms