RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 ANKRD34BA5PLL1 514 aa18.86■□□□□ 0.61
PVT1-204ENST00000517525 CTRB1P17538 263 aa18.86■□□□□ 0.61
PVT1-204ENST00000517525 ZNF585BQ52M93 769 aa18.86■□□□□ 0.61
PVT1-204ENST00000517525 CTRB2Q6GPI1 263 aa18.86■□□□□ 0.61
PVT1-204ENST00000517525 THOC7Q6I9Y2 204 aaKnown RBP18.86■□□□□ 0.61
PVT1-204ENST00000517525 SLC38A6Q8IZM9 456 aa18.86■□□□□ 0.61
PVT1-204ENST00000517525 OR6Q1Q8NGQ2 317 aa18.86■□□□□ 0.61
PVT1-204ENST00000517525 OR52I2Q8NH67 350 aa18.86■□□□□ 0.61
PVT1-204ENST00000517525 DYNC2LI1Q8TCX1 351 aa18.86■□□□□ 0.61
PVT1-204ENST00000517525 FANCD2OSQ96PS1 177 aa18.86■□□□□ 0.61
PVT1-204ENST00000517525 FYTTD1Q96QD9 318 aaKnown RBP18.86■□□□□ 0.61
PVT1-204ENST00000517525 OR4C12Q96R67 309 aa18.86■□□□□ 0.61
PVT1-204ENST00000517525 PRR25Q96S07 402 aa18.86■□□□□ 0.61
PVT1-204ENST00000517525 CCDC59Q9P031 241 aaKnown RBP18.86■□□□□ 0.61
PVT1-204ENST00000517525 RABL2AQ9UBK7 228 aaPredicted RBP18.86■□□□□ 0.61
PVT1-204ENST00000517525 KLK11Q9UBX7 282 aa18.86■□□□□ 0.61
PVT1-204ENST00000517525 RABL2BQ9UNT1 228 aa18.86■□□□□ 0.61
PVT1-204ENST00000517525 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.85■□□□□ 0.61
PVT1-204ENST00000517525 DHFRP00374 187 aa18.85■□□□□ 0.61
PVT1-204ENST00000517525 PRH1P02810 166 aa18.85■□□□□ 0.61
PVT1-204ENST00000517525 S100GP29377 79 aa18.85■□□□□ 0.61
PVT1-204ENST00000517525 MRPS10P82664 201 aaKnown RBP18.85■□□□□ 0.61
PVT1-204ENST00000517525 SSBP1Q04837 148 aaKnown RBP18.85■□□□□ 0.61
PVT1-204ENST00000517525 LHFPL1Q86WI0 220 aa18.85■□□□□ 0.61
PVT1-204ENST00000517525 ARRDC1Q8N5I2 433 aa18.85■□□□□ 0.61
PVT1-204ENST00000517525 FCAMRQ8WWV6 532 aa18.85■□□□□ 0.61
PVT1-204ENST00000517525 SIGLEC8Q9NYZ4 499 aa18.85■□□□□ 0.61
PVT1-204ENST00000517525 TRAV3A0A0B4J244 114 aa18.84■□□□□ 0.61
PVT1-204ENST00000517525 DPPA5A6NC42 116 aa18.84■□□□□ 0.61
PVT1-204ENST00000517525 MARCH11A6NNE9 402 aa18.84■□□□□ 0.61
PVT1-204ENST00000517525 CTDSP2O14595 271 aa18.84■□□□□ 0.61
PVT1-204ENST00000517525 TRBV12-3P01733 135 aa18.84■□□□□ 0.61
PVT1-204ENST00000517525 AREGP15514 252 aa18.84■□□□□ 0.61
PVT1-204ENST00000517525 HIST1H1BP16401 226 aaKnown RBP18.84■□□□□ 0.61
PVT1-204ENST00000517525 PTBP1P26599 531 aaKnown RBP eCLIP18.84■□□□□ 0.612e-7■■■■■ 36
PVT1-204ENST00000517525 LPAR6P43657 344 aa18.84■□□□□ 0.61
PVT1-204ENST00000517525 ERVK-16P61578 105 aa18.84■□□□□ 0.61
PVT1-204ENST00000517525 DEFA5Q01523 94 aa18.84■□□□□ 0.61
PVT1-204ENST00000517525 EXOSC2Q13868 293 aaKnown RBP18.84■□□□□ 0.61
PVT1-204ENST00000517525 IL34Q6ZMJ4 242 aa18.84■□□□□ 0.61
PVT1-204ENST00000517525 DMBX1Q8NFW5 382 aa18.84■□□□□ 0.61
PVT1-204ENST00000517525 COMMD5Q9GZQ3 224 aa18.84■□□□□ 0.61
PVT1-204ENST00000517525 IGLC7A0M8Q6 106 aa18.83■□□□□ 0.6
PVT1-204ENST00000517525 GABARAPH6UMI1 98 aa18.83■□□□□ 0.6
PVT1-204ENST00000517525 IGLV1-51P01701 117 aa18.83■□□□□ 0.6
PVT1-204ENST00000517525 CD74P04233 296 aa18.83■□□□□ 0.6
PVT1-204ENST00000517525 TATDN3Q17R31 274 aa18.83■□□□□ 0.6
PVT1-204ENST00000517525 C15orf32Q32M92 178 aa18.83■□□□□ 0.6
PVT1-204ENST00000517525 RNASE10Q5GAN6 216 aaKnown RBP18.83■□□□□ 0.6
PVT1-204ENST00000517525 HSD17B13Q7Z5P4 300 aaPredicted RBP18.83■□□□□ 0.6
PVT1-204ENST00000517525 OR9G4Q8NGQ1 327 aa18.83■□□□□ 0.6
PVT1-204ENST00000517525 ZNF486Q96H40 463 aaPredicted RBP18.83■□□□□ 0.6
PVT1-204ENST00000517525 OR2J3O76001 311 aa18.82■□□□□ 0.6
PVT1-204ENST00000517525 MYOD1P15172 320 aa18.82■□□□□ 0.6
PVT1-204ENST00000517525 RND3P61587 244 aa18.82■□□□□ 0.6
PVT1-204ENST00000517525 LAX1Q8IWV1 398 aa18.82■□□□□ 0.6
PVT1-204ENST00000517525 TMEM229BQ8NBD8 167 aa18.82■□□□□ 0.6
PVT1-204ENST00000517525 FBXL7Q9UJT9 491 aa18.82■□□□□ 0.6
PVT1-204ENST00000517525 DMRT1Q9Y5R6 373 aa18.82■□□□□ 0.6
PVT1-204ENST00000517525 IGLV11-55A0A075B6I3 123 aa18.81■□□□□ 0.6
PVT1-204ENST00000517525 M0QYG6 137 aa18.81■□□□□ 0.6
PVT1-204ENST00000517525 BMPR1BO00238 502 aa18.81■□□□□ 0.6
PVT1-204ENST00000517525 RGS5O15539 181 aa18.81■□□□□ 0.6
PVT1-204ENST00000517525 CD3DP04234 171 aa18.81■□□□□ 0.6
PVT1-204ENST00000517525 IFNA6P05013 189 aa18.81■□□□□ 0.6
PVT1-204ENST00000517525 RPEL1Q2QD12 228 aa18.81■□□□□ 0.6
PVT1-204ENST00000517525 PHLDA2Q53GA4 152 aa18.81■□□□□ 0.6
PVT1-204ENST00000517525 QTRT1Q9BXR0 403 aaKnown RBP18.81■□□□□ 0.6
PVT1-204ENST00000517525 CTDSPLO15194 276 aa18.8■□□□□ 0.6
PVT1-204ENST00000517525 SPNP16150 400 aa18.8■□□□□ 0.6
PVT1-204ENST00000517525 SYNJ2BPP57105 145 aa18.8■□□□□ 0.6
PVT1-204ENST00000517525 CD69Q07108 199 aa18.8■□□□□ 0.6
PVT1-204ENST00000517525 TBC1D26Q86UD7 250 aa18.8■□□□□ 0.6
PVT1-204ENST00000517525 OR1L8Q8NGR8 309 aa18.8■□□□□ 0.6
PVT1-204ENST00000517525 TEX50A0A1B0GTY4 177 aa18.79■□□□□ 0.6
PVT1-204ENST00000517525 NDUFB8O95169 186 aa18.79■□□□□ 0.6
PVT1-204ENST00000517525 KRASP01116 189 aa18.79■□□□□ 0.6
PVT1-204ENST00000517525 TRAPPC2P0DI81 140 aa18.79■□□□□ 0.6
PVT1-204ENST00000517525 TRAPPC2BP0DI82 140 aa18.79■□□□□ 0.6
PVT1-204ENST00000517525 TAS2R19P59542 299 aa18.79■□□□□ 0.6
PVT1-204ENST00000517525 SMIM4Q8WVI0 70 aa18.79■□□□□ 0.6
PVT1-204ENST00000517525 TSC22D3Q99576 134 aa18.79■□□□□ 0.6
PVT1-204ENST00000517525 NDUFA4L2Q9NRX3 87 aa18.79■□□□□ 0.6
PVT1-204ENST00000517525 FKBP11Q9NYL4 201 aa18.79■□□□□ 0.6
PVT1-204ENST00000517525 H3BMQ9 156 aa18.78■□□□□ 0.6
PVT1-204ENST00000517525 NHLRC4P0CG21 123 aaPredicted RBP18.78■□□□□ 0.6
PVT1-204ENST00000517525 GP9P14770 177 aa18.78■□□□□ 0.6
PVT1-204ENST00000517525 C19orf35Q6ZS72 473 aa18.78■□□□□ 0.6
PVT1-204ENST00000517525 TERB2Q8NHR7 220 aa18.78■□□□□ 0.6
PVT1-204ENST00000517525 ISOC1Q96CN7 298 aa18.78■□□□□ 0.6
PVT1-204ENST00000517525 SLIRPQ9GZT3 109 aaKnown RBP18.78■□□□□ 0.6
PVT1-204ENST00000517525 PRNDQ9UKY0 176 aa18.78■□□□□ 0.6
PVT1-204ENST00000517525 DNAH9Q9NYC9 4486 aa18.77■□□□□ 0.6
PVT1-204ENST00000517525 SNAPC5O75971 98 aa18.77■□□□□ 0.6
PVT1-204ENST00000517525 CSN3P07498 182 aa18.77■□□□□ 0.6
PVT1-204ENST00000517525 DEFA4P12838 97 aa18.77■□□□□ 0.6
PVT1-204ENST00000517525 RPA2P15927 270 aa18.77■□□□□ 0.6
PVT1-204ENST00000517525 G6PCP35575 357 aa18.77■□□□□ 0.6
PVT1-204ENST00000517525 MECP2P51608 486 aaKnown RBP18.77■□□□□ 0.6
PVT1-204ENST00000517525 RNASE12Q5GAN4 147 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms