RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 TMEM229BQ8NBD8 167 aa2.73□□□□□ -1.97
RNU4-60P-201ENST00000517239 NUP35Q8NFH5 326 aa2.73□□□□□ -1.97
RNU4-60P-201ENST00000517239 OR5A1Q8NGJ0 315 aa2.73□□□□□ -1.97
RNU4-60P-201ENST00000517239 RBPMSQ93062 196 aaKnown RBP2.73□□□□□ -1.97
RNU4-60P-201ENST00000517239 RNASE6Q93091 150 aaKnown RBP2.73□□□□□ -1.97
RNU4-60P-201ENST00000517239 RMI2Q96E14 147 aa2.73□□□□□ -1.97
RNU4-60P-201ENST00000517239 BORCS8Q96FH0 119 aa2.73□□□□□ -1.97
RNU4-60P-201ENST00000517239 B9D2Q9BPU9 175 aa2.73□□□□□ -1.97
RNU4-60P-201ENST00000517239 PYGO2Q9BRQ0 406 aa2.73□□□□□ -1.97
RNU4-60P-201ENST00000517239 IMUPQ9GZP8 106 aa2.73□□□□□ -1.97
RNU4-60P-201ENST00000517239 CALML5Q9NZT1 146 aa2.73□□□□□ -1.97
RNU4-60P-201ENST00000517239 LAMTOR3Q9UHA4 124 aa2.73□□□□□ -1.97
RNU4-60P-201ENST00000517239 LAMTOR2Q9Y2Q5 125 aa2.73□□□□□ -1.97
RNU4-60P-201ENST00000517239 PHLDA3Q9Y5J5 127 aa2.73□□□□□ -1.97
RNU4-60P-201ENST00000517239 OVOS2A0A0G2JMS6 1433 aa2.73□□□□□ -1.97
RNU4-60P-201ENST00000517239 BCL9O00512 1426 aa2.73□□□□□ -1.97
RNU4-60P-201ENST00000517239 SMG6Q86US8 1419 aaKnown RBP2.73□□□□□ -1.97
RNU4-60P-201ENST00000517239 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.73□□□□□ -1.97
RNU4-60P-201ENST00000517239 MED23Q9ULK4 1368 aa2.73□□□□□ -1.97
RNU4-60P-201ENST00000517239 KDM5BQ9UGL1 1544 aa2.73□□□□□ -1.97
RNU4-60P-201ENST00000517239 MYH7BA7E2Y1 1941 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 A0A096LPI6 279 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 IGKV1D-43A0A0B4J1Z2 117 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 TRDV1A0A1B0GX56 115 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 FAM168BA1KXE4 195 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 NKX2-6A6NCS4 301 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 IZUMO1RA6ND01 250 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 C1orf196B1AJZ1 125 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 ZNF73O43830 326 aaPredicted RBP2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 OR2H2O95918 312 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 OR5AC1P0C628 307 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 LINC00869P0C866 280 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 HIST1H2BOP23527 126 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 SRIP30626 198 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 HIST1H2BBP33778 126 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 EVX1P49640 407 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 HIST1H2BDP58876 126 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 RPS11P62280 158 aaKnown RBP eCLIP2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 HIST1H2BCP62807 126 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 HIST1H1AQ02539 215 aaPredicted RBP2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 SYCNQ0VAF6 134 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 LTBP1Q14766 1721 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 HIST2H2BEQ16778 126 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 SP6Q3SY56 376 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 MORN2Q502X0 79 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 RASL11AQ6T310 242 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 H1FOOQ8IZA3 346 aaPredicted RBP2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 ZNF433Q8N7K0 673 aaPredicted RBP2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 HIST1H2BHQ93079 126 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 TMEM203Q969S6 136 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 NARS2Q96I59 477 aaKnown RBP2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 HIST1H2BNQ99877 126 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 HIST1H2BMQ99879 126 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 GGACTQ9BVM4 153 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 OR2H1Q9GZK4 316 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 GABARAPL1Q9H0R8 117 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 ZNRD1Q9P1U0 126 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 OTOFQ9HC10 1997 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 BRWD3Q6RI45 1802 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 FAM135AQ9P2D6 1515 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 DENND4CQ5VZ89 1909 aa2.72□□□□□ -1.97
RNU4-60P-201ENST00000517239 A2MP01023 1474 aa2.71□□□□□ -1.97
RNU4-60P-201ENST00000517239 TNS2Q63HR2 1409 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 CNTLNQ9NXG0 1405 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 IGHV3OR15-7A0A075B7D8 119 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 MEIKINA0A087WXM9 373 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 IGHV3-43A0A0B4J1X8 118 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 IGHV3-64DA0A0J9YX35 117 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 A0A1B0GW64 132 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 TMEM223A0PJW6 202 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 FAM25AB3EWG3 89 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 FAM25CB3EWG5 89 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 FAM25GB3EWG6 89 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 C9JAW5 83 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 C9JCJ5 164 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 GABARAPH6UMI1 98 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 H7BYZ3 331 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 M0R2Z0 102 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 UBE2L6O14933 153 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 ZNF324O75467 553 aaPredicted RBP2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 TNFSF15O95150 251 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 NRASP01111 189 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 HRASP01112 189 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 KRASP01116 189 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 IGKV1-5P01602 117 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 BCL2P10415 239 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 IL1RNP18510 177 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 CASP1P29466 404 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 CCR2P41597 374 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 RPS10P46783 165 aaKnown RBP2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 KLF3P57682 345 aaPredicted RBP2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 RPL30P62888 115 aaKnown RBP2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 IGLV3-21P80748 117 aaPredicted RBP2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 SLC38A11Q08AI6 406 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 HNRNPA0Q13151 305 aaKnown RBP2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 C15orf32Q32M92 178 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 SLC25A34Q6PIV7 304 aa2.71□□□□□ -1.98
RNU4-60P-201ENST00000517239 C18orf65Q6ZTR6 163 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms