RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 IL36GQ9NZH8 169 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 ING4Q9UNL4 249 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 SLC7A11Q9UPY5 501 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 SLC22A13Q9Y226 551 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 LSM2Q9Y333 95 aaKnown RBP3.88□□□□□ -1.79
NIPBL-205ENST00000505998 TBL2Q9Y4P3 447 aaKnown RBP3.88□□□□□ -1.79
NIPBL-205ENST00000505998 TMEM14AQ9Y6G1 99 aa3.88□□□□□ -1.79
NIPBL-205ENST00000505998 CRYBG3Q68DQ2 2970 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 AKAP6Q13023 2319 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 CELSR2Q9HCU4 2923 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 IGLV3-9A0A075B6K5 115 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 IGHV1-18A0A0C4DH31 117 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 A0A1W2PQL4 384 aaPredicted RBP3.87□□□□□ -1.79
NIPBL-205ENST00000505998 LRP5LA4QPB2 252 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 NKX2-6A6NCS4 301 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 FAM231BA6NCW3 169 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 EEF1E1-BLOC1S5C9J1V9 151 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 ZNF878C9JN71 531 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 C19orf84I3L1E1 186 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 CDIPTO14735 213 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 PDCD5O14737 125 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 EEF1E1O43324 174 aaKnown RBP3.87□□□□□ -1.79
NIPBL-205ENST00000505998 FARS2O95363 451 aaKnown RBP3.87□□□□□ -1.79
NIPBL-205ENST00000505998 APOC3P02656 99 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 GYPBP06028 91 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 CECR9P0C854 216 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 HLA-GP17693 338 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 CCL1P22362 96 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 MYL9P24844 172 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 S100A2P29034 98 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 GNRHRP30968 328 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 PYCR1P32322 319 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 PMELP40967 661 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 CD200P41217 278 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 TMEM33P57088 247 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 RPS20P60866 119 aaKnown RBP3.87□□□□□ -1.79
NIPBL-205ENST00000505998 SNRPD2P62316 118 aaKnown RBP3.87□□□□□ -1.79
NIPBL-205ENST00000505998 RPL19P84098 196 aaKnown RBP3.87□□□□□ -1.79
NIPBL-205ENST00000505998 PSG4Q00888 419 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 FABP9Q0Z7S8 132 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 NEDD8Q15843 81 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 TP53I3Q53FA7 332 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 SPANXN2Q5MJ10 180 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 FAM74A1Q5RGS3 127 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 RBM48Q5RL73 367 aaKnown RBP3.87□□□□□ -1.79
NIPBL-205ENST00000505998 NCMAPQ5T1S8 102 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 SYT6Q5T7P8 510 aaPredicted RBP3.87□□□□□ -1.79
NIPBL-205ENST00000505998 C9orf135Q5VTT2 229 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 SSX7Q7RTT5 188 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 LYG2Q86SG7 212 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 NAA40Q86UY6 237 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 SNX29P2Q8IUI4 249 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 SLC35F2Q8IXU6 374 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 PUSL1Q8N0Z8 303 aaKnown RBP3.87□□□□□ -1.79
NIPBL-205ENST00000505998 SVBPQ8N300 66 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 CCDC71LQ8N9Z2 235 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 PROKR2Q8NFJ6 384 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 OR52I1Q8NGK6 324 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 OR11L1Q8NGX0 322 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 MCFD2Q8NI22 146 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 ZNF431Q8TF32 576 aaPredicted RBP3.87□□□□□ -1.79
NIPBL-205ENST00000505998 ASB17Q8WXJ9 295 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 CACNG8Q8WXS5 425 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 ACOT12Q8WYK0 555 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 ZMYND19Q96E35 227 aaPredicted RBP3.87□□□□□ -1.79
NIPBL-205ENST00000505998 SEC22AQ96IW7 307 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 OR8B4Q96RC9 309 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 AMELYQ99218 206 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 VPS25Q9BRG1 176 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 NICN1Q9BSH3 213 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 SRRQ9GZT4 340 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 ZNF442Q9H7R0 627 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 AUNIPQ9H7T9 357 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 SCN3BQ9NY72 215 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 DNAJC27Q9NZQ0 273 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 NUFIP1Q9UHK0 495 aaKnown RBP3.87□□□□□ -1.79
NIPBL-205ENST00000505998 RPL36Q9Y3U8 105 aaKnown RBP3.87□□□□□ -1.79
NIPBL-205ENST00000505998 TIMM10BQ9Y5J6 103 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 CACNA1DQ01668 2161 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 PDZD2O15018 2839 aa3.87□□□□□ -1.79
NIPBL-205ENST00000505998 NAV2Q8IVL1 2488 aa3.86□□□□□ -1.79
NIPBL-205ENST00000505998 IGHV2OR16-5A0A0B4J2B6 119 aa3.86□□□□□ -1.79
NIPBL-205ENST00000505998 DPRXA6NFQ7 191 aa3.86□□□□□ -1.79
NIPBL-205ENST00000505998 TEX46H3BTG2 121 aa3.86□□□□□ -1.79
NIPBL-205ENST00000505998 RER1O15258 196 aa3.86□□□□□ -1.79
NIPBL-205ENST00000505998 SC5DO75845 299 aa3.86□□□□□ -1.79
NIPBL-205ENST00000505998 MPZL1O95297 269 aa3.86□□□□□ -1.79
NIPBL-205ENST00000505998 FADS2O95864 444 aaKnown RBP3.86□□□□□ -1.79
NIPBL-205ENST00000505998 PTHP01270 115 aa3.86□□□□□ -1.79
NIPBL-205ENST00000505998 IGLV1-47P01700 117 aa3.86□□□□□ -1.79
NIPBL-205ENST00000505998 IGHV2-5P01817 119 aa3.86□□□□□ -1.79
NIPBL-205ENST00000505998 HLA-HP01893 362 aa3.86□□□□□ -1.79
NIPBL-205ENST00000505998 ISG15P05161 165 aa3.86□□□□□ -1.79
NIPBL-205ENST00000505998 CRYBA1P05813 215 aa3.86□□□□□ -1.79
NIPBL-205ENST00000505998 OR8U8P0C7N1 319 aa3.86□□□□□ -1.79
NIPBL-205ENST00000505998 RD3LP0DJH9 198 aa3.86□□□□□ -1.79
NIPBL-205ENST00000505998 GTF2F2P13984 249 aa3.86□□□□□ -1.79
NIPBL-205ENST00000505998 MGMTP16455 207 aa3.86□□□□□ -1.79
NIPBL-205ENST00000505998 PCMT1P22061 227 aa3.86□□□□□ -1.79
NIPBL-205ENST00000505998 STOMP27105 288 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms