RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 TNXAQ16473 311 aa14.57□□□□□ -0.08
HMGXB3-201ENST00000502717 MOGAT3Q86VF5 341 aa14.57□□□□□ -0.08
HMGXB3-201ENST00000502717 OR2T8A6NH00 312 aa14.56□□□□□ -0.08
HMGXB3-201ENST00000502717 FBLL1A6NHQ2 334 aaKnown RBP14.56□□□□□ -0.08
HMGXB3-201ENST00000502717 ZNF785A8K8V0 405 aa14.56□□□□□ -0.08
HMGXB3-201ENST00000502717 PTGDSP41222 190 aa14.56□□□□□ -0.08
HMGXB3-201ENST00000502717 SLC35E4Q6ICL7 350 aa14.56□□□□□ -0.08
HMGXB3-201ENST00000502717 EREGO14944 169 aa14.56□□□□□ -0.08
HMGXB3-201ENST00000502717 ZNHIT1O43257 154 aa14.56□□□□□ -0.08
HMGXB3-201ENST00000502717 COMPP49747 757 aaPredicted RBP14.56□□□□□ -0.08
HMGXB3-201ENST00000502717 UCP2P55851 309 aa14.56□□□□□ -0.08
HMGXB3-201ENST00000502717 HBBP68871 147 aa14.56□□□□□ -0.08
HMGXB3-201ENST00000502717 MMDQ15546 238 aa14.56□□□□□ -0.08
HMGXB3-201ENST00000502717 FAM19A2Q8N3H0 131 aa14.56□□□□□ -0.08
HMGXB3-201ENST00000502717 OR10AG1Q8NH19 301 aa14.56□□□□□ -0.08
HMGXB3-201ENST00000502717 PGLYRP4Q96LB8 373 aa14.56□□□□□ -0.08
HMGXB3-201ENST00000502717 REPIN1Q9BWE0 567 aaKnown RBP14.56□□□□□ -0.08
HMGXB3-201ENST00000502717 GNB1LQ9BYB4 327 aa14.56□□□□□ -0.08
HMGXB3-201ENST00000502717 JPT1Q9UK76 154 aa14.56□□□□□ -0.08
HMGXB3-201ENST00000502717 ZNF324O75467 553 aaPredicted RBP14.56□□□□□ -0.08
HMGXB3-201ENST00000502717 OR10J3Q5JRS4 329 aa14.56□□□□□ -0.08
HMGXB3-201ENST00000502717 VWA8A3KMH1 1905 aa14.56□□□□□ -0.08
HMGXB3-201ENST00000502717 CGAP01215 116 aa14.55□□□□□ -0.08
HMGXB3-201ENST00000502717 ZNF883P0CG24 379 aa14.55□□□□□ -0.08
HMGXB3-201ENST00000502717 CLDN18P56856 261 aa14.55□□□□□ -0.08
HMGXB3-201ENST00000502717 KLRB1Q12918 225 aa14.55□□□□□ -0.08
HMGXB3-201ENST00000502717 GCSAMQ8N6F7 178 aa14.55□□□□□ -0.08
HMGXB3-201ENST00000502717 ZNF430Q9H8G1 570 aaPredicted RBP14.55□□□□□ -0.08
HMGXB3-201ENST00000502717 RNF7Q9UBF6 113 aa14.55□□□□□ -0.08
HMGXB3-201ENST00000502717 ANAPC10Q9UM13 185 aa14.55□□□□□ -0.08
HMGXB3-201ENST00000502717 TRAV9-2A0A087WT02 112 aa14.55□□□□□ -0.08
HMGXB3-201ENST00000502717 C16orf97H3BN30 126 aa14.55□□□□□ -0.08
HMGXB3-201ENST00000502717 RRHO14718 337 aa14.55□□□□□ -0.08
HMGXB3-201ENST00000502717 CEBPDP49716 269 aaPredicted RBP14.55□□□□□ -0.08
HMGXB3-201ENST00000502717 Q1RN00 199 aa14.55□□□□□ -0.08
HMGXB3-201ENST00000502717 TMEM177Q53S58 311 aa14.55□□□□□ -0.08
HMGXB3-201ENST00000502717 TEX38Q6PEX7 206 aa14.55□□□□□ -0.08
HMGXB3-201ENST00000502717 PRNTQ86SH4 94 aa14.55□□□□□ -0.08
HMGXB3-201ENST00000502717 PLAURQ03405 335 aa14.55□□□□□ -0.08
HMGXB3-201ENST00000502717 NRN1LQ496H8 165 aa14.55□□□□□ -0.08
HMGXB3-201ENST00000502717 ACSF3Q4G176 576 aaPredicted RBP14.55□□□□□ -0.08
HMGXB3-201ENST00000502717 ASCL3Q9NQ33 180 aa14.55□□□□□ -0.08
HMGXB3-201ENST00000502717 CHCHD2Q9Y6H1 151 aaPredicted RBP14.55□□□□□ -0.08
HMGXB3-201ENST00000502717 GUCD1Q96NT3 240 aa14.55□□□□□ -0.08
HMGXB3-201ENST00000502717 IZUMO1RA6ND01 250 aa14.54□□□□□ -0.08
HMGXB3-201ENST00000502717 BMI1P35226 326 aa14.54□□□□□ -0.08
HMGXB3-201ENST00000502717 ZNF146Q15072 292 aa14.54□□□□□ -0.08
HMGXB3-201ENST00000502717 C1orf174Q8IYL3 243 aa14.54□□□□□ -0.08
HMGXB3-201ENST00000502717 RASL11BQ9BPW5 248 aa14.54□□□□□ -0.08
HMGXB3-201ENST00000502717 RNF144BQ7Z419 303 aa14.54□□□□□ -0.08
HMGXB3-201ENST00000502717 FADS6Q8N9I5 356 aa14.54□□□□□ -0.08
HMGXB3-201ENST00000502717 RAB37Q96AX2 223 aa14.54□□□□□ -0.08
HMGXB3-201ENST00000502717 LINC00470Q9BZP3 86 aa14.54□□□□□ -0.08
HMGXB3-201ENST00000502717 C17orf98A8MV24 154 aa14.54□□□□□ -0.08
HMGXB3-201ENST00000502717 OCC1Q8TAD7 63 aa14.54□□□□□ -0.08
HMGXB3-201ENST00000502717 SAP25Q8TEE9 199 aa14.54□□□□□ -0.08
HMGXB3-201ENST00000502717 SLC25A33Q9BSK2 321 aa14.54□□□□□ -0.08
HMGXB3-201ENST00000502717 CSRP1P21291 193 aaKnown RBP14.54□□□□□ -0.08
HMGXB3-201ENST00000502717 S100A4P26447 101 aaKnown RBP14.54□□□□□ -0.08
HMGXB3-201ENST00000502717 ZNF826PQ6ZT77 177 aa14.54□□□□□ -0.08
HMGXB3-201ENST00000502717 RPP25LQ8N5L8 163 aaKnown RBP14.54□□□□□ -0.08
HMGXB3-201ENST00000502717 RPEQ96AT9 228 aa14.54□□□□□ -0.08
HMGXB3-201ENST00000502717 MS4A5Q9H3V2 200 aa14.54□□□□□ -0.08
HMGXB3-201ENST00000502717 HIGD1AQ9Y241 93 aa14.54□□□□□ -0.08
HMGXB3-201ENST00000502717 LINC00271P0C7V0 271 aa14.53□□□□□ -0.08
HMGXB3-201ENST00000502717 TMEM256Q8N2U0 113 aa14.53□□□□□ -0.08
HMGXB3-201ENST00000502717 LOC389332A0A1B0GUA5 103 aa14.53□□□□□ -0.08
HMGXB3-201ENST00000502717 J3QW42 95 aa14.53□□□□□ -0.08
HMGXB3-201ENST00000502717 GDF9O60383 454 aa14.53□□□□□ -0.08
HMGXB3-201ENST00000502717 PRRX1P54821 245 aa14.53□□□□□ -0.08
HMGXB3-201ENST00000502717 LINC01551Q86U37 167 aa14.53□□□□□ -0.08
HMGXB3-201ENST00000502717 ZNF837Q96EG3 531 aaPredicted RBP14.53□□□□□ -0.08
HMGXB3-201ENST00000502717 IGLV3-32A0A0A0MS00 114 aa14.53□□□□□ -0.08
HMGXB3-201ENST00000502717 C12orf77C9JDV5 145 aa14.53□□□□□ -0.08
HMGXB3-201ENST00000502717 PCOLCEQ15113 449 aa14.53□□□□□ -0.08
HMGXB3-201ENST00000502717 TBR1Q16650 682 aa14.53□□□□□ -0.08
HMGXB3-201ENST00000502717 CLEC2AQ6UVW9 174 aa14.53□□□□□ -0.08
HMGXB3-201ENST00000502717 SNRNP40Q96DI7 357 aaKnown RBP14.53□□□□□ -0.08
HMGXB3-201ENST00000502717 OSTCQ9NRP0 149 aa14.53□□□□□ -0.08
HMGXB3-201ENST00000502717 IGKV1-12A0A0C4DH73 117 aa14.53□□□□□ -0.08
HMGXB3-201ENST00000502717 IGKV1D-12P01611 117 aa14.53□□□□□ -0.08
HMGXB3-201ENST00000502717 ARF6P62330 175 aa14.53□□□□□ -0.08
HMGXB3-201ENST00000502717 PCSK4Q6UW60 755 aa14.53□□□□□ -0.08
HMGXB3-201ENST00000502717 EAF1Q96JC9 268 aaPredicted RBP14.53□□□□□ -0.08
HMGXB3-201ENST00000502717 HSPB7Q9UBY9 170 aa14.53□□□□□ -0.08
HMGXB3-201ENST00000502717 CD55P08174 381 aa14.52□□□□□ -0.08
HMGXB3-201ENST00000502717 RPL13AP40429 203 aaKnown RBP14.52□□□□□ -0.08
HMGXB3-201ENST00000502717 MYOZ3Q8TDC0 251 aa14.52□□□□□ -0.08
HMGXB3-201ENST00000502717 CCL17Q92583 94 aa14.52□□□□□ -0.08
HMGXB3-201ENST00000502717 RTTNQ86VV8 2226 aa14.52□□□□□ -0.09
HMGXB3-201ENST00000502717 KLHDC3Q9BQ90 382 aa14.52□□□□□ -0.09
HMGXB3-201ENST00000502717 TMPRSS2O15393 492 aa14.52□□□□□ -0.09
HMGXB3-201ENST00000502717 TIMP3P35625 211 aa14.52□□□□□ -0.09
HMGXB3-201ENST00000502717 PNKDQ8N490 385 aa14.52□□□□□ -0.09
HMGXB3-201ENST00000502717 THYN1Q9P016 225 aa14.52□□□□□ -0.09
HMGXB3-201ENST00000502717 IGHV3OR15-7A0A075B7D8 119 aa14.51□□□□□ -0.09
HMGXB3-201ENST00000502717 RPL8P62917 257 aaKnown RBP14.51□□□□□ -0.09
HMGXB3-201ENST00000502717 SCGB1D4Q6XE38 83 aa14.51□□□□□ -0.09
HMGXB3-201ENST00000502717 SNHG12Q9BXW3 62 aa14.51□□□□□ -0.09
HMGXB3-201ENST00000502717 TTTY12Q9BZ98 90 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms