RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 OR4D2P58180 307 aa1.39□□□□□ -2.19
CLK1-213ENST00000492793 HIST1H4AP62805 103 aaKnown RBP1.39□□□□□ -2.19
CLK1-213ENST00000492793 TNFAIP8L3Q5GJ75 292 aa1.39□□□□□ -2.19
CLK1-213ENST00000492793 COQ5Q5HYK3 327 aa1.39□□□□□ -2.19
CLK1-213ENST00000492793 Q6ZSA8 131 aa1.39□□□□□ -2.19
CLK1-213ENST00000492793 DEFB119Q8N690 84 aa1.39□□□□□ -2.19
CLK1-213ENST00000492793 ZNF676Q8N7Q3 588 aa1.39□□□□□ -2.19
CLK1-213ENST00000492793 SGMS2Q8NHU3 365 aa1.39□□□□□ -2.19
CLK1-213ENST00000492793 ASB17Q8WXJ9 295 aa1.39□□□□□ -2.19
CLK1-213ENST00000492793 MRPS26Q9BYN8 205 aaKnown RBP1.39□□□□□ -2.19
CLK1-213ENST00000492793 ANGPT4Q9Y264 503 aa1.39□□□□□ -2.19
CLK1-213ENST00000492793 HEATR5BQ9P2D3 2071 aa1.38□□□□□ -2.19
CLK1-213ENST00000492793 GGT3PA6NGU5 568 aa1.38□□□□□ -2.19
CLK1-213ENST00000492793 LST1O00453 97 aa1.38□□□□□ -2.19
CLK1-213ENST00000492793 LEPROTO15243 131 aa1.38□□□□□ -2.19
CLK1-213ENST00000492793 SERPINA7P05543 415 aa1.38□□□□□ -2.19
CLK1-213ENST00000492793 TRGC1P0CF51 173 aa1.38□□□□□ -2.19
CLK1-213ENST00000492793 ZNF705DP0CH99 300 aaPredicted RBP1.38□□□□□ -2.19
CLK1-213ENST00000492793 NAA20P61599 178 aa1.38□□□□□ -2.19
CLK1-213ENST00000492793 POLR2GP62487 172 aaKnown RBP eCLIP1.38□□□□□ -2.19
CLK1-213ENST00000492793 CDKL4Q5MAI5 379 aa1.38□□□□□ -2.19
CLK1-213ENST00000492793 TMEM86AQ8N2M4 240 aa1.38□□□□□ -2.19
CLK1-213ENST00000492793 OR51I1Q9H343 314 aa1.38□□□□□ -2.19
CLK1-213ENST00000492793 LSM5Q9Y4Y9 91 aaKnown RBP1.38□□□□□ -2.19
CLK1-213ENST00000492793 TIMM22Q9Y584 194 aa1.38□□□□□ -2.19
CLK1-213ENST00000492793 CUL9Q8IWT3 2517 aa1.38□□□□□ -2.19
CLK1-213ENST00000492793 BAZ2BQ9UIF8 2168 aaKnown RBP1.38□□□□□ -2.19
CLK1-213ENST00000492793 MEIKINA0A087WXM9 373 aa1.37□□□□□ -2.19
CLK1-213ENST00000492793 A0A0D9SEW6 157 aa1.37□□□□□ -2.19
CLK1-213ENST00000492793 ACOX3O15254 700 aa1.37□□□□□ -2.19
CLK1-213ENST00000492793 NAPSAO96009 420 aa1.37□□□□□ -2.19
CLK1-213ENST00000492793 ISG15P05161 165 aa1.37□□□□□ -2.19
CLK1-213ENST00000492793 CALB1P05937 261 aa1.37□□□□□ -2.19
CLK1-213ENST00000492793 HLA-DMBP28068 263 aa1.37□□□□□ -2.19
CLK1-213ENST00000492793 EIF2B2P49770 351 aaKnown RBP1.37□□□□□ -2.19
CLK1-213ENST00000492793 CAV1Q03135 178 aa1.37□□□□□ -2.19
CLK1-213ENST00000492793 EMX1Q04741 257 aaPredicted RBP1.37□□□□□ -2.19
CLK1-213ENST00000492793 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
CLK1-213ENST00000492793 HIST2H3PS2Q5TEC6 136 aa1.37□□□□□ -2.19
CLK1-213ENST00000492793 C7orf65Q6ZTY9 151 aa1.37□□□□□ -2.19
CLK1-213ENST00000492793 ZNF550Q7Z398 422 aa1.37□□□□□ -2.19
CLK1-213ENST00000492793 RNF133Q8WVZ7 376 aa1.37□□□□□ -2.19
CLK1-213ENST00000492793 ANKRD7Q92527 254 aa1.37□□□□□ -2.19
CLK1-213ENST00000492793 ROPN1LQ96C74 230 aa1.37□□□□□ -2.19
CLK1-213ENST00000492793 XAGE1AQ9HD64 81 aa1.37□□□□□ -2.19
CLK1-213ENST00000492793 MAST2Q6P0Q8 1798 aa1.36□□□□□ -2.19
CLK1-213ENST00000492793 A0A1B0GV50 99 aa1.36□□□□□ -2.19
CLK1-213ENST00000492793 SLC22A1O15245 554 aa1.36□□□□□ -2.19
CLK1-213ENST00000492793 MSMBP08118 114 aa1.36□□□□□ -2.19
CLK1-213ENST00000492793 SRP19P09132 144 aaKnown RBP1.36□□□□□ -2.19
CLK1-213ENST00000492793 GPX2P18283 190 aa1.36□□□□□ -2.19
CLK1-213ENST00000492793 AKR1C3P42330 323 aa1.36□□□□□ -2.19
CLK1-213ENST00000492793 MARCKSL1P49006 195 aa1.36□□□□□ -2.19
CLK1-213ENST00000492793 KRTAP21-3Q3LHN1 58 aa1.36□□□□□ -2.19
CLK1-213ENST00000492793 LPCAT4Q643R3 524 aa1.36□□□□□ -2.19
CLK1-213ENST00000492793 GLT8D1Q68CQ7 371 aa1.36□□□□□ -2.19
CLK1-213ENST00000492793 CD200R1LQ6Q8B3 271 aa1.36□□□□□ -2.19
CLK1-213ENST00000492793 C10orf67Q8IYJ2 551 aa1.36□□□□□ -2.19
CLK1-213ENST00000492793 INTS1Q8N201 2190 aaKnown RBP1.36□□□□□ -2.19
CLK1-213ENST00000492793 RPP25LQ8N5L8 163 aaKnown RBP1.36□□□□□ -2.19
CLK1-213ENST00000492793 CNBD2Q96M20 576 aa1.36□□□□□ -2.19
CLK1-213ENST00000492793 CHST6Q9GZX3 395 aa1.36□□□□□ -2.19
CLK1-213ENST00000492793 FUT9Q9Y231 359 aa1.36□□□□□ -2.19
CLK1-213ENST00000492793 DISP1Q96F81 1524 aa1.35□□□□□ -2.19
CLK1-213ENST00000492793 TRBV6-5A0A0K0K1A5 114 aa1.35□□□□□ -2.19
CLK1-213ENST00000492793 MEIS3P1A6NDR6 274 aa1.35□□□□□ -2.19
CLK1-213ENST00000492793 TGOLN2O43493 480 aa1.35□□□□□ -2.19
CLK1-213ENST00000492793 NOS1APO75052 506 aaPredicted RBP1.35□□□□□ -2.19
CLK1-213ENST00000492793 DCTN3O75935 186 aa1.35□□□□□ -2.19
CLK1-213ENST00000492793 ZNF705BP0CI00 300 aaPredicted RBP1.35□□□□□ -2.19
CLK1-213ENST00000492793 SULT1A3P0DMM9 295 aa1.35□□□□□ -2.19
CLK1-213ENST00000492793 SULT1A4P0DMN0 295 aa1.35□□□□□ -2.19
CLK1-213ENST00000492793 TNFAIP6P98066 277 aaPredicted RBP1.35□□□□□ -2.19
CLK1-213ENST00000492793 GRK1Q15835 563 aa1.35□□□□□ -2.19
CLK1-213ENST00000492793 ACSM3Q53FZ2 586 aa1.35□□□□□ -2.19
CLK1-213ENST00000492793 FAM27BQ5VT28 67 aa1.35□□□□□ -2.19
CLK1-213ENST00000492793 RPS19BP1Q86WX3 136 aaKnown RBP1.35□□□□□ -2.19
CLK1-213ENST00000492793 MED12LQ86YW9 2145 aa1.35□□□□□ -2.19
CLK1-213ENST00000492793 DEFB125Q8N687 156 aa1.35□□□□□ -2.19
CLK1-213ENST00000492793 OR1M1Q8NGA1 313 aa1.35□□□□□ -2.19
CLK1-213ENST00000492793 Q96M85 177 aa1.35□□□□□ -2.19
CLK1-213ENST00000492793 XPNPEP1Q9NQW7 623 aa1.35□□□□□ -2.19
CLK1-213ENST00000492793 RSL24D1Q9UHA3 163 aaKnown RBP1.35□□□□□ -2.19
CLK1-213ENST00000492793 RP1L1Q8IWN7 2480 aaPredicted RBP1.34□□□□□ -2.19
CLK1-213ENST00000492793 C9orf84Q5VXU9 1444 aa1.34□□□□□ -2.19
CLK1-213ENST00000492793 KIF13BQ9NQT8 1826 aa1.34□□□□□ -2.19
CLK1-213ENST00000492793 CCL5P13501 91 aa1.34□□□□□ -2.19
CLK1-213ENST00000492793 FAM201AQ5SY85 155 aa1.34□□□□□ -2.19
CLK1-213ENST00000492793 C8orf74Q6P047 294 aa1.34□□□□□ -2.19
CLK1-213ENST00000492793 FAM173BQ6P4H8 233 aa1.34□□□□□ -2.19
CLK1-213ENST00000492793 MBD3L1Q8WWY6 194 aa1.34□□□□□ -2.19
CLK1-213ENST00000492793 PTH2Q96A98 100 aa1.34□□□□□ -2.19
CLK1-213ENST00000492793 DOCK5Q9H7D0 1870 aa1.34□□□□□ -2.19
CLK1-213ENST00000492793 TRBV20OR9-2A0A075B6H5 130 aa1.33□□□□□ -2.2
CLK1-213ENST00000492793 CIAO1O76071 339 aa1.33□□□□□ -2.2
CLK1-213ENST00000492793 KRT75O95678 551 aa1.33□□□□□ -2.2
CLK1-213ENST00000492793 UBBP0CG47 229 aa1.33□□□□□ -2.2
CLK1-213ENST00000492793 MAGOHP61326 146 aaKnown RBP1.33□□□□□ -2.2
CLK1-213ENST00000492793 ELOBQ15370 118 aa1.33□□□□□ -2.2
CLK1-213ENST00000492793 NNATQ16517 81 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms