RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 PEAK1Q9H792 1746 aa-0.11□□□□□ -2.43
CCDC93-209ENST00000488908 TENM4Q6N022 2769 aa-0.11□□□□□ -2.43
CCDC93-209ENST00000488908 STRCQ7RTU9 1775 aa-0.11□□□□□ -2.43
CCDC93-209ENST00000488908 DMBT1Q9UGM3 2413 aaPredicted RBP-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 TMED7-TICAM2A0A0A6YYA0 188 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 K7ERQ8 282 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 NDUFS8O00217 210 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 COX7A2LO14548 114 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 INE1O15225 51 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 LEPROTO15243 131 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 NSA2O95478 260 aaKnown RBP-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 C1QAP02745 245 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 KRTAP2-3P0C7H8 128 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 CCDC172P0C7W6 258 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 DDTP30046 118 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 GRPRP30550 384 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 RAB4BP61018 213 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 RPS24P62847 133 aaKnown RBP-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 HLA-DRB3P79483 266 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 SMAGPQ0VAQ4 97 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 FBXO48Q5FWF7 155 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 FAM45BPQ6NSW5 357 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 SSX8Q7RTT4 187 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 PHF13Q86YI8 300 aaPredicted RBP-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 BLIDQ8IZY5 108 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 WFDC11Q8NEX6 87 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 OR1M1Q8NGA1 313 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 OR4D11Q8NGI4 311 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 SGMS2Q8NHU3 365 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 TSKUQ8WUA8 353 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 ANKRD7Q92527 254 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 BORCS5Q969J3 196 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 ANKRD36BP1Q96IX9 119 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 RBP7Q96R05 134 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 CYTH2Q99418 400 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 KRTAP2-4Q9BYR9 128 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 KRTAP2-1Q9BYU5 128 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 AK3Q9UIJ7 227 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 A0A1W2PP64 1363 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 TMEM94Q12767 1356 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 ADGRB2O60241 1585 aa-0.12□□□□□ -2.43
CCDC93-209ENST00000488908 TTC21AQ8NDW8 1320 aa-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 ALPK3Q96L96 1907 aa-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 NOS1APO75052 506 aaPredicted RBP-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 YEATS4O95619 227 aa-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 KRT75O95678 551 aa-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 APOA1P02647 267 aa-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 RAB13P51153 203 aa-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 ZNF80P51504 273 aaPredicted RBP-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 CARD18P57730 90 aa-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 SPINK7P58062 85 aa-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 STX5Q13190 355 aa-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 STX3Q13277 289 aa-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 KCNJ8Q15842 424 aa-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 DNAL1Q4LDG9 190 aa-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 SPINK9Q5DT21 86 aa-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 ZNF826PQ6ZT77 177 aa-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 OOSP2Q86WS3 158 aa-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 C10orf67Q8IYJ2 551 aa-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 OR7G1Q8NGA0 311 aa-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 RNASEH2CQ8TDP1 164 aaKnown RBP-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 PPCDCQ96CD2 204 aa-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 MED10Q9BTT4 135 aa-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 NSRP1Q9H0G5 558 aaKnown RBP-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 GPR84Q9NQS5 396 aa-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 ACER3Q9NUN7 267 aa-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 RABL2AQ9UBK7 228 aaPredicted RBP-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 DENND4CQ5VZ89 1909 aa-0.13□□□□□ -2.43
CCDC93-209ENST00000488908 COL4A5P29400 1685 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 KCNK1O00180 336 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 CCRL2O00421 344 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 FADS1O60427 444 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 OR1I1O60431 355 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 IGHV3-7P01780 117 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 GP1BAP07359 652 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 FGF6P10767 208 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 CXCL2P19875 107 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 HLA-DMBP28068 263 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 S100A7P31151 101 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 EIF2B2P49770 351 aaKnown RBP-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 OR4D2P58180 307 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 XIAPP98170 497 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 RPL18Q07020 188 aaKnown RBP-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 PDE6HQ13956 83 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 JOSD1Q15040 202 aaPredicted RBP-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 LRRC26Q2I0M4 334 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 KRTAP6-1Q3LI64 71 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 SPANXN5Q5MJ07 72 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 C5orf46Q6UWT4 87 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 ZNF550Q7Z398 422 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 GRINAQ7Z429 371 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 DEFB128Q7Z7B8 93 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 LINC00311Q8N616 119 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 TMEM251Q8N6I4 163 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 JOSD2Q8TAC2 188 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 TMEM106AQ96A25 262 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 TIPINQ9BVW5 301 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 OR8D2Q9GZM6 311 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 WDR54Q9H977 334 aa-0.14□□□□□ -2.43
CCDC93-209ENST00000488908 HRASLSQ9HDD0 168 aa-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms