RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 FABP9Q0Z7S8 132 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 SSX1Q16384 188 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 ZNF239Q16600 458 aaKnown RBP2.17□□□□□ -2.06
HMGN4-202ENST00000477243 GUCA2BQ16661 112 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 PLPPR5Q32ZL2 321 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 RNF212Q495C1 297 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 SCGB2B2Q4G0G5 96 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 NXNL2Q5VZ03 156 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 CYB5R2Q6BCY4 276 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 GLYATQ6IB77 296 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 PLET1Q6UQ28 207 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 REG3GQ6UW15 175 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 Q6ZRU5 148 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 HSD17B13Q7Z5P4 300 aaPredicted RBP2.17□□□□□ -2.06
HMGN4-202ENST00000477243 CIARTQ8N365 385 aaPredicted RBP2.17□□□□□ -2.06
HMGN4-202ENST00000477243 LRRC18Q8N456 261 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 DEFB124Q8NES8 71 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 OR9A2Q8NGT5 310 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 OR4K15Q8NH41 348 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 TWIST2Q8WVJ9 160 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 ITLN1Q8WWA0 313 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 MBD3L1Q8WWY6 194 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 TM4SF18Q96CE8 201 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 LINC00477Q96M19 166 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 SERPINI1Q99574 410 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 HSD17B10Q99714 261 aaKnown RBP2.17□□□□□ -2.06
HMGN4-202ENST00000477243 DOHHQ9BU89 302 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 TMEM147Q9BVK8 224 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 GNB1LQ9BYB4 327 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 SLC29A3Q9BZD2 475 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 TBL1XR1Q9BZK7 514 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 TMPRSS5Q9H3S3 457 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 CTSZQ9UBR2 303 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 LAMTOR3Q9UHA4 124 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 LINC00527Q9UJ94 153 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 PKIGQ9Y2B9 76 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 PCYT1BQ9Y5K3 369 aaPredicted RBP2.17□□□□□ -2.06
HMGN4-202ENST00000477243 F11RQ9Y624 299 aaKnown RBP2.17□□□□□ -2.06
HMGN4-202ENST00000477243 MUC4Q99102 2169 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 TACC2O95359 2948 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 CADP27708 2225 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 TET1Q8NFU7 2136 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 DOCK6Q96HP0 2047 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 PTPRJQ12913 1337 aa2.17□□□□□ -2.06
HMGN4-202ENST00000477243 LOC285556D6RIA3 1793 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 IGKV1-8A0A0C4DH67 115 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 A0A0X1KG70 313 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 A0A1B0GX51 115 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 OR4C45A6NMZ5 311 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 KLLNB2CW77 178 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 C9JQL5 133 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 ATP6V1G2-DDX39BF2Z307 99 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.16□□□□□ -2.06
HMGN4-202ENST00000477243 J3KT08 172 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 DNASE2O00115 360 aaPredicted RBP2.16□□□□□ -2.06
HMGN4-202ENST00000477243 PIRO00625 290 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 DEGS1O15121 323 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 GYG2O15488 501 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 CHST10O43529 356 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 SERF1AO75920 110 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 IFNA10P01566 189 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 HLA-DRB1P01911 266 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 GYPCP04921 128 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 C8GP07360 202 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 SOD3P08294 240 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 OR56A5P0C7T3 313 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 SMIM6P0DI80 62 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 FGF6P10767 208 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 CTSEP14091 401 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 GZMHP20718 246 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 IL3RAP26951 378 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 IMPA1P29218 277 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 NUDT1P36639 197 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 POLR2IP36954 125 aaKnown RBP2.16□□□□□ -2.06
HMGN4-202ENST00000477243 PSMD8P48556 350 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 MP68P56378 58 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 NCALDP61601 193 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 RAP1AP62834 184 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 RPS28P62857 69 aaKnown RBP2.16□□□□□ -2.06
HMGN4-202ENST00000477243 GNG5P63218 68 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 ERCC8Q13216 396 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 JOSD1Q15040 202 aaPredicted RBP2.16□□□□□ -2.06
HMGN4-202ENST00000477243 RSPO1Q2MKA7 263 aaPredicted RBP2.16□□□□□ -2.06
HMGN4-202ENST00000477243 KRTAP19-4Q3LI73 84 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 TIMM50Q3ZCQ8 353 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 IBA57Q5T440 356 aaKnown RBP2.16□□□□□ -2.06
HMGN4-202ENST00000477243 IGFL4Q6B9Z1 124 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 OGFOD2Q6N063 350 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 AGTRAPQ6RW13 159 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 SBSNQ6UWP8 590 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 IGFL2Q6UWQ7 119 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 ATP5L2Q7Z4Y8 100 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 LINC00596Q86U02 117 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 C11orf53Q8IXP5 236 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 UMODL1-AS1Q8N2C9 162 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 DRAM1Q8N682 238 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 ANKRD29Q8N6D5 301 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 ZIC4Q8N9L1 334 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 ST6GALNAC3Q8NDV1 305 aa2.16□□□□□ -2.06
HMGN4-202ENST00000477243 PTX4Q96A99 478 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms