RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 HLA-GP17693 338 aa8.12□□□□□ -1.11
CASC3-204ENST00000474190 VAMP1P23763 118 aa8.12□□□□□ -1.11
CASC3-204ENST00000474190 S100GP29377 79 aa8.12□□□□□ -1.11
CASC3-204ENST00000474190 DEFA1P59665 94 aa8.12□□□□□ -1.11
CASC3-204ENST00000474190 DEFA3P59666 94 aa8.12□□□□□ -1.11
CASC3-204ENST00000474190 SRSF4Q08170 494 aaKnown RBP8.12□□□□□ -1.11
CASC3-204ENST00000474190 KIAA0141Q14154 515 aaPredicted RBP8.12□□□□□ -1.11
CASC3-204ENST00000474190 FXYD3Q14802 87 aa8.12□□□□□ -1.11
CASC3-204ENST00000474190 KLK9Q2XQG4 91 aa8.12□□□□□ -1.11
CASC3-204ENST00000474190 AWAT1Q58HT5 328 aa8.12□□□□□ -1.11
CASC3-204ENST00000474190 FOXRED2Q8IWF2 684 aa8.12□□□□□ -1.11
CASC3-204ENST00000474190 STPG2Q8N412 459 aa8.12□□□□□ -1.11
CASC3-204ENST00000474190 OR4A5Q8NH83 315 aa8.12□□□□□ -1.11
CASC3-204ENST00000474190 ENKURQ8TC29 256 aa8.12□□□□□ -1.11
CASC3-204ENST00000474190 ZNF431Q8TF32 576 aaPredicted RBP8.12□□□□□ -1.11
CASC3-204ENST00000474190 CASTOR1Q8WTX7 329 aa8.12□□□□□ -1.11
CASC3-204ENST00000474190 CHPT1Q8WUD6 406 aa8.12□□□□□ -1.11
CASC3-204ENST00000474190 LSM10Q969L4 123 aaKnown RBP8.12□□□□□ -1.11
CASC3-204ENST00000474190 QTRT1Q9BXR0 403 aaKnown RBP8.12□□□□□ -1.11
CASC3-204ENST00000474190 NDUFA4L2Q9NRX3 87 aa8.12□□□□□ -1.11
CASC3-204ENST00000474190 KIAA1456Q9P272 454 aa8.12□□□□□ -1.11
CASC3-204ENST00000474190 SHPKQ9UHJ6 478 aa8.12□□□□□ -1.11
CASC3-204ENST00000474190 KLK9Q9UKQ9 250 aa8.12□□□□□ -1.11
CASC3-204ENST00000474190 FOXA2Q9Y261 457 aaPredicted RBP8.12□□□□□ -1.11
CASC3-204ENST00000474190 DMRT1Q9Y5R6 373 aa8.12□□□□□ -1.11
CASC3-204ENST00000474190 IGLC7A0M8Q6 106 aa8.11□□□□□ -1.11
CASC3-204ENST00000474190 RPL8P62917 257 aaKnown RBP8.11□□□□□ -1.11
CASC3-204ENST00000474190 CBX3Q13185 183 aa8.11□□□□□ -1.11
CASC3-204ENST00000474190 IL15RAQ13261 267 aa8.11□□□□□ -1.11
CASC3-204ENST00000474190 TRIM16LQ309B1 348 aa8.11□□□□□ -1.11
CASC3-204ENST00000474190 PDLIM3Q53GG5 364 aaPredicted RBP8.11□□□□□ -1.11
CASC3-204ENST00000474190 SLC35E3Q7Z769 313 aa8.11□□□□□ -1.11
CASC3-204ENST00000474190 SGMS2Q8NHU3 365 aa8.11□□□□□ -1.11
CASC3-204ENST00000474190 SRSF12Q8WXF0 261 aaKnown RBP8.11□□□□□ -1.11
CASC3-204ENST00000474190 KCNIP3Q9Y2W7 256 aa8.11□□□□□ -1.11
CASC3-204ENST00000474190 HMX3A6NHT5 357 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 MSGN1A6NI15 193 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 ADARB2-AS1A8MUL3 147 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 IGLV1-40P01703 118 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 OPN1MWP04001 364 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 OPN1MW2P0DN77 364 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 OPN1MW3P0DN78 364 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 AREGP15514 252 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 VDAC1P21796 283 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 VDAC2P45880 294 aaPredicted RBP8.1□□□□□ -1.11
CASC3-204ENST00000474190 WT1-ASQ06250 92 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 TNXAQ16473 311 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 C4orf46Q504U0 113 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 C9orf152Q5JTZ5 239 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 GGNBP1Q5YKI7 109 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 PLET1Q6UQ28 207 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 ZNF429Q86V71 674 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 FAM219AQ8IW50 185 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 MMD2Q8IY49 270 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 LGI3Q8N145 548 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 RNF152Q8N8N0 203 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 LFNGQ8NES3 379 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 DMBX1Q8NFW5 382 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 OR10W1Q8NGF6 305 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 OR4F5Q8NH21 305 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 VSTM2AQ8TAG5 236 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 MYOZ3Q8TDC0 251 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 WFDC12Q8WWY7 111 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 ARPC1AQ92747 370 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 WDR89Q96FK6 387 aaPredicted RBP8.1□□□□□ -1.11
CASC3-204ENST00000474190 KLK15Q9H2R5 256 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 PARP11Q9NR21 331 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 CACNG5Q9UF02 275 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 RNF114Q9Y508 228 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 WSB1Q9Y6I7 421 aa8.1□□□□□ -1.11
CASC3-204ENST00000474190 DUXBA0A1W2PPF3 345 aa8.09□□□□□ -1.11
CASC3-204ENST00000474190 AP4M1O00189 453 aa8.09□□□□□ -1.11
CASC3-204ENST00000474190 ST8SIA3O43173 380 aa8.09□□□□□ -1.11
CASC3-204ENST00000474190 KCNAB3O43448 404 aa8.09□□□□□ -1.11
CASC3-204ENST00000474190 IGHG4P01861 327 aa8.09□□□□□ -1.11
CASC3-204ENST00000474190 CRYBA1P05813 215 aa8.09□□□□□ -1.11
CASC3-204ENST00000474190 PSMB8P28062 276 aa8.09□□□□□ -1.11
CASC3-204ENST00000474190 MAS1LP35410 378 aa8.09□□□□□ -1.11
CASC3-204ENST00000474190 MFAP2P55001 183 aa8.09□□□□□ -1.11
CASC3-204ENST00000474190 GNB1P62873 340 aa8.09□□□□□ -1.11
CASC3-204ENST00000474190 TATDN3Q17R31 274 aa8.09□□□□□ -1.11
CASC3-204ENST00000474190 RGS21Q2M5E4 152 aa8.09□□□□□ -1.11
CASC3-204ENST00000474190 AKIRIN2Q53H80 203 aa8.09□□□□□ -1.11
CASC3-204ENST00000474190 PVRIGQ6DKI7 326 aa8.09□□□□□ -1.11
CASC3-204ENST00000474190 LCNL1Q6ZST4 164 aa8.09□□□□□ -1.11
CASC3-204ENST00000474190 H2BFWTQ7Z2G1 175 aa8.09□□□□□ -1.11
CASC3-204ENST00000474190 ZNF329Q86UD4 541 aa8.09□□□□□ -1.11
CASC3-204ENST00000474190 ZNF695Q8IW36 515 aa8.09□□□□□ -1.11
CASC3-204ENST00000474190 KLHDC1Q8N7A1 406 aa8.09□□□□□ -1.11
CASC3-204ENST00000474190 OR2T6Q8NHC8 308 aa8.09□□□□□ -1.11
CASC3-204ENST00000474190 GRPEL2Q8TAA5 225 aa8.09□□□□□ -1.11
CASC3-204ENST00000474190 TMEM170AQ8WVE7 144 aa8.09□□□□□ -1.11
CASC3-204ENST00000474190 OR10C1Q96KK4 312 aa8.09□□□□□ -1.11
CASC3-204ENST00000474190 COA4Q9NYJ1 87 aa8.09□□□□□ -1.11
CASC3-204ENST00000474190 ZNF257Q9Y2Q1 563 aa8.09□□□□□ -1.11
CASC3-204ENST00000474190 TRAV41A0A0B4J266 112 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 SNRPGP15A8MWD9 76 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 INS-IGF2F8WCM5 200 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 CCSO14618 274 aa8.08□□□□□ -1.12
CASC3-204ENST00000474190 CRYGCP07315 174 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms