RNA–Protein interactions for RNA: ENST00000467505.5

RB1-202, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 1 (best)

Gene RB1, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-202ENST00000467505 CD300LFQ8TDQ1 290 aa10.85□□□□□ -0.67
RB1-202ENST00000467505 WDR89Q96FK6 387 aaPredicted RBP10.85□□□□□ -0.67
RB1-202ENST00000467505 CCDC140Q96MF4 163 aa10.85□□□□□ -0.67
RB1-202ENST00000467505 FAM110AQ9BQ89 295 aa10.85□□□□□ -0.67
RB1-202ENST00000467505 SRSF8Q9BRL6 282 aaKnown RBP10.85□□□□□ -0.67
RB1-202ENST00000467505 YTHDF1Q9BYJ9 559 aaKnown RBP10.85□□□□□ -0.67
RB1-202ENST00000467505 COMMD5Q9GZQ3 224 aa10.85□□□□□ -0.67
RB1-202ENST00000467505 DIABLOQ9NR28 239 aa10.85□□□□□ -0.67
RB1-202ENST00000467505 STARD9Q9P2P6 4700 aa10.84□□□□□ -0.67
RB1-202ENST00000467505 IGLV11-55A0A075B6I3 123 aa10.84□□□□□ -0.67
RB1-202ENST00000467505 TRAV18A0A075B6X5 111 aa10.84□□□□□ -0.67
RB1-202ENST00000467505 TRAV25A0A0B4J276 109 aa10.84□□□□□ -0.67
RB1-202ENST00000467505 RBMY1BA6NDE4 496 aaKnown RBP10.84□□□□□ -0.67
RB1-202ENST00000467505 RBMY1EA6NEQ0 496 aaKnown RBP10.84□□□□□ -0.67
RB1-202ENST00000467505 E7EUB6 86 aa10.84□□□□□ -0.67
RB1-202ENST00000467505 TNFSF12O43508 249 aa10.84□□□□□ -0.67
RB1-202ENST00000467505 TMEM127O75204 238 aa10.84□□□□□ -0.67
RB1-202ENST00000467505 HPRT1P00492 218 aa10.84□□□□□ -0.67
RB1-202ENST00000467505 IGHV3-23P01764 117 aa10.84□□□□□ -0.67
RB1-202ENST00000467505 FGF2P09038 288 aa10.84□□□□□ -0.67
RB1-202ENST00000467505 RBMY1DP0C7P1 496 aaKnown RBP10.84□□□□□ -0.67
RB1-202ENST00000467505 AREGP15514 252 aa10.84□□□□□ -0.67
RB1-202ENST00000467505 CBX5P45973 191 aa10.84□□□□□ -0.67
RB1-202ENST00000467505 HOGA1Q86XE5 327 aa10.84□□□□□ -0.67
RB1-202ENST00000467505 TMEM61Q8N0U2 210 aa10.84□□□□□ -0.67
RB1-202ENST00000467505 UXS1Q8NBZ7 420 aa10.84□□□□□ -0.67
RB1-202ENST00000467505 LYSTQ99698 3801 aa10.84□□□□□ -0.67
RB1-202ENST00000467505 SLC5A7Q9GZV3 580 aa10.84□□□□□ -0.67
RB1-202ENST00000467505 CCL28Q9NRJ3 127 aa10.84□□□□□ -0.67
RB1-202ENST00000467505 SACSQ9NZJ4 4579 aa10.84□□□□□ -0.67
RB1-202ENST00000467505 TMEM213A2RRL7 107 aa10.83□□□□□ -0.68
RB1-202ENST00000467505 SDC2P34741 201 aa10.83□□□□□ -0.68
RB1-202ENST00000467505 ELLP55199 621 aaPredicted RBP10.83□□□□□ -0.68
RB1-202ENST00000467505 BRWD1-AS2P59051 145 aa10.83□□□□□ -0.68
RB1-202ENST00000467505 MXD1Q05195 221 aa10.83□□□□□ -0.68
RB1-202ENST00000467505 POU2AF1Q16633 256 aa10.83□□□□□ -0.68
RB1-202ENST00000467505 IDNKQ5T6J7 187 aa10.83□□□□□ -0.68
RB1-202ENST00000467505 RBPMS2Q6ZRY4 209 aaKnown RBP10.83□□□□□ -0.68
RB1-202ENST00000467505 C19orf35Q6ZS72 473 aa10.83□□□□□ -0.68
RB1-202ENST00000467505 HSD17B13Q7Z5P4 300 aaPredicted RBP10.83□□□□□ -0.68
RB1-202ENST00000467505 CACNG8Q8WXS5 425 aa10.83□□□□□ -0.68
RB1-202ENST00000467505 GGTLC1Q9BX51 225 aa10.83□□□□□ -0.68
RB1-202ENST00000467505 WFDC10AQ9H1F0 79 aa10.83□□□□□ -0.68
RB1-202ENST00000467505 MRPL27Q9P0M9 148 aaKnown RBP10.83□□□□□ -0.68
RB1-202ENST00000467505 UFC1Q9Y3C8 167 aa10.83□□□□□ -0.68
RB1-202ENST00000467505 S4R3C0 116 aa10.83□□□□□ -0.68
RB1-202ENST00000467505 CSMD3Q7Z407 3707 aa10.83□□□□□ -0.68
RB1-202ENST00000467505 LOC102724200A0A096LPH7 203 aaPredicted RBP10.82□□□□□ -0.68
RB1-202ENST00000467505 A0A1B0GW64 132 aa10.82□□□□□ -0.68
RB1-202ENST00000467505 SULT1C2O00338 296 aa10.82□□□□□ -0.68
RB1-202ENST00000467505 REG1AP05451 166 aa10.82□□□□□ -0.68
RB1-202ENST00000467505 CLEC3BP05452 202 aa10.82□□□□□ -0.68
RB1-202ENST00000467505 MYOD1P15172 320 aa10.82□□□□□ -0.68
RB1-202ENST00000467505 FXYD4P59646 89 aa10.82□□□□□ -0.68
RB1-202ENST00000467505 OR2B8PP59922 312 aa10.82□□□□□ -0.68
RB1-202ENST00000467505 HERV-K104P61576 105 aa10.82□□□□□ -0.68
RB1-202ENST00000467505 ERVK-16P61578 105 aa10.82□□□□□ -0.68
RB1-202ENST00000467505 PLET1Q6UQ28 207 aa10.82□□□□□ -0.68
RB1-202ENST00000467505 SLC38A6Q8IZM9 456 aa10.82□□□□□ -0.68
RB1-202ENST00000467505 GVQW1Q8N7I0 195 aa10.82□□□□□ -0.68
RB1-202ENST00000467505 DMBX1Q8NFW5 382 aa10.82□□□□□ -0.68
RB1-202ENST00000467505 OR5AP2Q8NGF4 316 aa10.82□□□□□ -0.68
RB1-202ENST00000467505 PLEKHA2Q9HB19 425 aa10.82□□□□□ -0.68
RB1-202ENST00000467505 COMMD9Q9P000 198 aa10.82□□□□□ -0.68
RB1-202ENST00000467505 MLXQ9UH92 298 aa10.82□□□□□ -0.68
RB1-202ENST00000467505 MFSD2BA6NFX1 497 aa10.81□□□□□ -0.68
RB1-202ENST00000467505 UPK2O00526 184 aa10.81□□□□□ -0.68
RB1-202ENST00000467505 SCAF4O95104 1147 aaKnown RBP10.81□□□□□ -0.68
RB1-202ENST00000467505 EDN2P20800 178 aa10.81□□□□□ -0.68
RB1-202ENST00000467505 GPR183P32249 361 aa10.81□□□□□ -0.68
RB1-202ENST00000467505 AADACL3Q5VUY0 350 aa10.81□□□□□ -0.68
RB1-202ENST00000467505 BTNL8Q6UX41 500 aa10.81□□□□□ -0.68
RB1-202ENST00000467505 CROCCP3Q8IVE0 287 aa10.81□□□□□ -0.68
RB1-202ENST00000467505 OR1L6Q8NGR2 347 aa10.81□□□□□ -0.68
RB1-202ENST00000467505 VN1R17PQ8TDU5 208 aa10.81□□□□□ -0.68
RB1-202ENST00000467505 GIMAP1Q8WWP7 306 aa10.81□□□□□ -0.68
RB1-202ENST00000467505 GPHA2Q96T91 129 aa10.81□□□□□ -0.68
RB1-202ENST00000467505 QTRT1Q9BXR0 403 aaKnown RBP10.81□□□□□ -0.68
RB1-202ENST00000467505 IFT46Q9NQC8 304 aa10.81□□□□□ -0.68
RB1-202ENST00000467505 LOC100506127A0A0U1RQW1 187 aa10.8□□□□□ -0.68
RB1-202ENST00000467505 IGLC7A0M8Q6 106 aa10.8□□□□□ -0.68
RB1-202ENST00000467505 C8orf88P0DMB2 117 aa10.8□□□□□ -0.68
RB1-202ENST00000467505 PTBP1P26599 531 aaKnown RBP eCLIP10.8□□□□□ -0.68
RB1-202ENST00000467505 ZNF585BQ52M93 769 aa10.8□□□□□ -0.68
RB1-202ENST00000467505 ZNF773Q6PK81 442 aa10.8□□□□□ -0.68
RB1-202ENST00000467505 TMEM17Q86X19 198 aa10.8□□□□□ -0.68
RB1-202ENST00000467505 OR5H6Q8NGV6 325 aa10.8□□□□□ -0.68
RB1-202ENST00000467505 OR51H1Q8NH63 302 aa10.8□□□□□ -0.68
RB1-202ENST00000467505 ZNF502Q8TBZ5 544 aa10.8□□□□□ -0.68
RB1-202ENST00000467505 SLC25A38Q96DW6 304 aa10.8□□□□□ -0.68
RB1-202ENST00000467505 ATP6V0BQ99437 205 aa10.8□□□□□ -0.68
RB1-202ENST00000467505 AUNIPQ9H7T9 357 aa10.8□□□□□ -0.68
RB1-202ENST00000467505 TMEM140Q9NV12 185 aa10.8□□□□□ -0.68
RB1-202ENST00000467505 CGB1A6NKQ9 187 aa10.79□□□□□ -0.68
RB1-202ENST00000467505 TRAPPC2P0DI81 140 aa10.79□□□□□ -0.68
RB1-202ENST00000467505 TRAPPC2BP0DI82 140 aa10.79□□□□□ -0.68
RB1-202ENST00000467505 PTHLHP12272 177 aa10.79□□□□□ -0.68
RB1-202ENST00000467505 APOC4P55056 127 aa10.79□□□□□ -0.68
RB1-202ENST00000467505 TM4SF20Q53R12 229 aa10.79□□□□□ -0.68
RB1-202ENST00000467505 LAMTOR1Q6IAA8 161 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms