RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 OR2G3Q8NGZ4 309 aa11.82□□□□□ -0.52
HDAC6-213ENST00000462730 PUS1Q9Y606 427 aaKnown RBP eCLIP11.82□□□□□ -0.52
HDAC6-213ENST00000462730 PPIHO43447 177 aaKnown RBP11.81□□□□□ -0.52
HDAC6-213ENST00000462730 RUNX1Q01196 453 aa11.81□□□□□ -0.52
HDAC6-213ENST00000462730 ZNF525Q8N782 197 aa11.81□□□□□ -0.52
HDAC6-213ENST00000462730 YPEL4Q96NS1 127 aa11.81□□□□□ -0.52
HDAC6-213ENST00000462730 CIB3Q96Q77 187 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-213ENST00000462730 MRPL20Q9BYC9 149 aaKnown RBP11.81□□□□□ -0.52
HDAC6-213ENST00000462730 SLC35D1Q9NTN3 355 aa11.81□□□□□ -0.52
HDAC6-213ENST00000462730 UBR5O95071 2799 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-213ENST00000462730 TRAV3A0A0B4J244 114 aa11.81□□□□□ -0.52
HDAC6-213ENST00000462730 RBFOX3A6NFN3 312 aa11.81□□□□□ -0.52
HDAC6-213ENST00000462730 NDUFS7O75251 213 aa11.81□□□□□ -0.52
HDAC6-213ENST00000462730 GOSR1O95249 250 aa11.81□□□□□ -0.52
HDAC6-213ENST00000462730 OR2C1O95371 312 aa11.81□□□□□ -0.52
HDAC6-213ENST00000462730 IGHV1-8P0DP01 117 aa11.81□□□□□ -0.52
HDAC6-213ENST00000462730 CCL20P78556 96 aa11.81□□□□□ -0.52
HDAC6-213ENST00000462730 RELBQ01201 579 aa11.81□□□□□ -0.52
HDAC6-213ENST00000462730 SLC38A11Q08AI6 406 aa11.81□□□□□ -0.52
HDAC6-213ENST00000462730 RTL8BQ17RB0 113 aa11.81□□□□□ -0.52
HDAC6-213ENST00000462730 AARDQ4LEZ3 155 aa11.81□□□□□ -0.52
HDAC6-213ENST00000462730 OR8G2PQ6IF36 304 aa11.81□□□□□ -0.52
HDAC6-213ENST00000462730 OR8B3Q8NGG8 313 aa11.81□□□□□ -0.52
HDAC6-213ENST00000462730 OR10X1Q8NGY0 326 aa11.81□□□□□ -0.52
HDAC6-213ENST00000462730 RBMXL1Q96E39 390 aaKnown RBP11.81□□□□□ -0.52
HDAC6-213ENST00000462730 GNPNAT1Q96EK6 184 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-213ENST00000462730 TIMD4Q96H15 378 aa11.81□□□□□ -0.52
HDAC6-213ENST00000462730 OR8B2Q96RD0 313 aa11.81□□□□□ -0.52
HDAC6-213ENST00000462730 CHODLQ9H9P2 273 aa11.81□□□□□ -0.52
HDAC6-213ENST00000462730 A0A087WWC5 75 aa11.8□□□□□ -0.52
HDAC6-213ENST00000462730 CXorf65A6NEN9 183 aa11.8□□□□□ -0.52
HDAC6-213ENST00000462730 J3QR06 171 aa11.8□□□□□ -0.52
HDAC6-213ENST00000462730 IFNA10P01566 189 aa11.8□□□□□ -0.52
HDAC6-213ENST00000462730 HOXA5P20719 270 aa11.8□□□□□ -0.52
HDAC6-213ENST00000462730 SRSF1Q07955 248 aaKnown RBP eCLIP11.8□□□□□ -0.52
HDAC6-213ENST00000462730 SPSB3Q6PJ21 355 aa11.8□□□□□ -0.52
HDAC6-213ENST00000462730 LINC00311Q8N616 119 aa11.8□□□□□ -0.52
HDAC6-213ENST00000462730 C8orf31Q8N9H6 132 aa11.8□□□□□ -0.52
HDAC6-213ENST00000462730 OR13D1Q8NGV5 346 aa11.8□□□□□ -0.52
HDAC6-213ENST00000462730 RAB1CQ92928 201 aa11.8□□□□□ -0.52
HDAC6-213ENST00000462730 RHOVQ96L33 236 aa11.8□□□□□ -0.52
HDAC6-213ENST00000462730 TMEM68Q96MH6 324 aa11.8□□□□□ -0.52
HDAC6-213ENST00000462730 HRASP01112 189 aa11.79□□□□□ -0.52
HDAC6-213ENST00000462730 S100A2P29034 98 aa11.79□□□□□ -0.52
HDAC6-213ENST00000462730 CDX1P47902 265 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-213ENST00000462730 SPCS3P61009 180 aa11.79□□□□□ -0.52
HDAC6-213ENST00000462730 OR4A47Q6IF82 309 aa11.79□□□□□ -0.52
HDAC6-213ENST00000462730 ZNF596Q8TC21 504 aa11.79□□□□□ -0.52
HDAC6-213ENST00000462730 SCGB1C1Q8TD33 95 aa11.79□□□□□ -0.52
HDAC6-213ENST00000462730 NEIL1Q96FI4 390 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-213ENST00000462730 ELOA3CA0A087WX78 387 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-213ENST00000462730 A0A087X0M5 115 aa11.79□□□□□ -0.52
HDAC6-213ENST00000462730 A0A1B0GX30 115 aa11.79□□□□□ -0.52
HDAC6-213ENST00000462730 APOA2P02652 100 aa11.79□□□□□ -0.52
HDAC6-213ENST00000462730 REG1BP48304 166 aa11.79□□□□□ -0.52
HDAC6-213ENST00000462730 RPS16P62249 146 aaKnown RBP11.79□□□□□ -0.52
HDAC6-213ENST00000462730 THNSL2Q86YJ6 484 aa11.79□□□□□ -0.52
HDAC6-213ENST00000462730 ABHD12Q8N2K0 398 aa11.79□□□□□ -0.52
HDAC6-213ENST00000462730 OR9G1Q8NH87 305 aa11.79□□□□□ -0.52
HDAC6-213ENST00000462730 TMEM133Q9H2Q1 129 aa11.79□□□□□ -0.52
HDAC6-213ENST00000462730 SIRT7Q9NRC8 400 aa11.79□□□□□ -0.52
HDAC6-213ENST00000462730 KIAA1456Q9P272 454 aa11.79□□□□□ -0.52
HDAC6-213ENST00000462730 C15orf61A6NNL5 157 aa11.78□□□□□ -0.52
HDAC6-213ENST00000462730 H3BQ15 152 aa11.78□□□□□ -0.52
HDAC6-213ENST00000462730 TLE4Q04727 773 aa11.78□□□□□ -0.52
HDAC6-213ENST00000462730 POU2AF1Q16633 256 aa11.78□□□□□ -0.52
HDAC6-213ENST00000462730 LBHQ53QV2 105 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-213ENST00000462730 WDR25Q64LD2 544 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-213ENST00000462730 C11orf42Q8N5U0 333 aa11.78□□□□□ -0.52
HDAC6-213ENST00000462730 OR52E5Q8NH55 327 aa11.78□□□□□ -0.52
HDAC6-213ENST00000462730 SPTAN1Q13813 2472 aaKnown RBP11.78□□□□□ -0.52
HDAC6-213ENST00000462730 PPIAL4CA0A0B4J2A2 164 aa11.78□□□□□ -0.52
HDAC6-213ENST00000462730 UBE2L5PA0A1B0GUS4 154 aa11.78□□□□□ -0.52
HDAC6-213ENST00000462730 SEC14L6B5MCN3 397 aa11.78□□□□□ -0.52
HDAC6-213ENST00000462730 IGKV1-16P04430 117 aa11.78□□□□□ -0.52
HDAC6-213ENST00000462730 PPIAL4GP0DN37 164 aa11.78□□□□□ -0.52
HDAC6-213ENST00000462730 FAM71F2Q6NXP2 309 aa11.78□□□□□ -0.52
HDAC6-213ENST00000462730 TMEM186Q96B77 213 aa11.78□□□□□ -0.52
HDAC6-213ENST00000462730 GGACTQ9BVM4 153 aa11.78□□□□□ -0.52
HDAC6-213ENST00000462730 TCF19Q9Y242 345 aa11.78□□□□□ -0.52
HDAC6-213ENST00000462730 PMS2P5A8MQ11 134 aa11.77□□□□□ -0.53
HDAC6-213ENST00000462730 H0YJW9 148 aa11.77□□□□□ -0.53
HDAC6-213ENST00000462730 SRP19P09132 144 aaKnown RBP11.77□□□□□ -0.53
HDAC6-213ENST00000462730 EFNA4P52798 201 aa11.77□□□□□ -0.53
HDAC6-213ENST00000462730 DEFA6Q01524 100 aa11.77□□□□□ -0.53
HDAC6-213ENST00000462730 DIAPH2-AS1Q14236 149 aa11.77□□□□□ -0.53
HDAC6-213ENST00000462730 LRRC75BQ2VPJ9 315 aa11.77□□□□□ -0.53
HDAC6-213ENST00000462730 AKR1C8PQ5T2L2 129 aa11.77□□□□□ -0.53
HDAC6-213ENST00000462730 SP5Q6BEB4 398 aaPredicted RBP11.77□□□□□ -0.53
HDAC6-213ENST00000462730 ZNF429Q86V71 674 aa11.77□□□□□ -0.53
HDAC6-213ENST00000462730 C8orf46Q8TAG6 207 aa11.77□□□□□ -0.53
HDAC6-213ENST00000462730 RSG1Q9BU20 258 aa11.77□□□□□ -0.53
HDAC6-213ENST00000462730 FOXA2Q9Y261 457 aaPredicted RBP11.77□□□□□ -0.53
HDAC6-213ENST00000462730 KMT2BQ9UMN6 2715 aaPredicted RBP11.77□□□□□ -0.53
HDAC6-213ENST00000462730 C15orf62A8K5M9 175 aa11.76□□□□□ -0.53
HDAC6-213ENST00000462730 OVOL3O00110 214 aa11.76□□□□□ -0.53
HDAC6-213ENST00000462730 LY86O95711 162 aa11.76□□□□□ -0.53
HDAC6-213ENST00000462730 IL3RAP26951 378 aa11.76□□□□□ -0.53
HDAC6-213ENST00000462730 VDAC2P45880 294 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-213ENST00000462730 RPS10P46783 165 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms