RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 FAM24BQ8N5W8 94 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 LFNGQ8NES3 379 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 GALMQ96C23 342 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 LOC102723971A0A1B0GUV8 181 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 H3BUX3 64 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 OR2H2O95918 312 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 TK1P04183 234 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 ADH4P08319 380 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 DYNLT3P51808 116 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 FABP9Q0Z7S8 132 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 IL24Q13007 206 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 FAM209BQ5JX69 171 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 TMEM182Q6ZP80 229 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 DPF1Q92782 380 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 OR51I2Q9H344 312 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 TMEM242Q9NWH2 141 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 C1RLQ9NZP8 487 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 ODAMA1E959 279 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 CXorf65A6NEN9 183 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 AP4M1O00189 453 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 APOA2P02652 100 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 FAM106CPP0CH98 169 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 PRTN3P24158 256 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 REG1BP48304 166 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 RAB5BP61020 215 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 MPV17LQ2QL34 196 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 SPRNQ5BIV9 151 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 PRAMEF5Q5TYX0 476 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 PYGO2Q9BRQ0 406 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 PRDM13Q9H4Q3 707 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 RPS10P5Q9NQ39 176 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 TEX15Q9BXT5 2789 aa6.04□□□□□ -1.44
CDC42BPA-208ENST00000442054 H3BQ15 152 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 NPFFO15130 113 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 HOXA3O43365 443 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 VDAC1P21796 283 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 FXYD4P59646 89 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 SRPXP78539 464 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 HOXA4Q00056 320 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 PYY3Q5JQD4 70 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 LINC00596Q86U02 117 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 TGIF2LXQ8IUE1 241 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 RASL11BQ9BPW5 248 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 VSIRQ9H7M9 311 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 MBNL3Q9NUK0 354 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 FAM181BA6NEQ2 426 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 GATA4P43694 442 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 GLIPR1P48060 266 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 RPS16P62249 146 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 Q3ZCU0 254 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 DNLZQ5SXM8 178 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 HSD17B11Q8NBQ5 300 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 GPR146Q96CH1 333 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 C20orf24Q9BUV8 137 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 CCL28Q9NRJ3 127 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 DPM3Q9P2X0 92 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 FBXO7Q9Y3I1 522 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 IGHV3-72A0A0B4J1Y9 119 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 IGHV1-69DA0A0B4J2H0 117 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 HIST1H2BKO60814 126 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 IGHV1-69P01742 117 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 HIST1H2BJP06899 126 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 FABP1P07148 127 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 SNRNP70P08621 437 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 PGA5P0DJD9 388 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 HIST1H2BOP23527 126 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 HIST1H2BBP33778 126 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 CFHR2P36980 270 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 HIST1H2BDP58876 126 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 TAS2R30P59541 319 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 HIST1H2BCP62807 126 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 RUNX1Q01196 453 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 HIST2H2BEQ16778 126 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 DEFB112Q30KQ8 113 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 ZNF343Q6P1L6 599 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 OR5C1Q8NGR4 320 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 HIST1H2BHQ93079 126 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 ATP5SQ99766 215 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 HIST1H2BNQ99877 126 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 HIST1H2BMQ99879 126 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 HES4Q9HCC6 221 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 RNF150Q9ULK6 438 aa6.03□□□□□ -1.44
CDC42BPA-208ENST00000442054 BORCS7-ASMTA0A0B4J1R7 106 aa6.02□□□□□ -1.45
CDC42BPA-208ENST00000442054 A0A1W2PRX2 142 aa6.02□□□□□ -1.45
CDC42BPA-208ENST00000442054 PCP4L1A6NKN8 68 aa6.02□□□□□ -1.45
CDC42BPA-208ENST00000442054 ZNF727A8MUV8 499 aa6.02□□□□□ -1.45
CDC42BPA-208ENST00000442054 C1orf196B1AJZ1 125 aa6.02□□□□□ -1.45
CDC42BPA-208ENST00000442054 IGKV1D-33P01593 117 aa6.02□□□□□ -1.45
CDC42BPA-208ENST00000442054 IGKV1-33P01594 117 aa6.02□□□□□ -1.45
CDC42BPA-208ENST00000442054 F2RP25116 425 aa6.02□□□□□ -1.45
CDC42BPA-208ENST00000442054 SMCO1Q147U7 214 aa6.02□□□□□ -1.45
CDC42BPA-208ENST00000442054 AARDQ4LEZ3 155 aa6.02□□□□□ -1.45
CDC42BPA-208ENST00000442054 SLC35E3Q7Z769 313 aa6.02□□□□□ -1.45
CDC42BPA-208ENST00000442054 ZNF429Q86V71 674 aa6.02□□□□□ -1.45
CDC42BPA-208ENST00000442054 CCDC71LQ8N9Z2 235 aa6.02□□□□□ -1.45
CDC42BPA-208ENST00000442054 OR5R1Q8NH85 324 aa6.02□□□□□ -1.45
CDC42BPA-208ENST00000442054 LSM10Q969L4 123 aaKnown RBP6.02□□□□□ -1.45
CDC42BPA-208ENST00000442054 GGACTQ9BVM4 153 aa6.02□□□□□ -1.45
CDC42BPA-208ENST00000442054 C19orf24Q9BVV8 132 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms