RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 SHPKQ9UHJ6 478 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 TBX21Q9UL17 535 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 HS3ST2Q9Y278 367 aa4.78□□□□□ -1.64
ALMS1-IT1-201ENST00000441587 DOCK6Q96HP0 2047 aa4.78□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 KIAA1671Q9BY89 1806 aa4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 COL4A6Q14031 1691 aa4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 LTBP2Q14767 1821 aa4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 LOC101059948A0A1B0GTJ6 334 aa4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 IFITM5A6NNB3 132 aa4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 B4DEV8 164 aa4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 K7EMT4 169 aa4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 XKRYO14609 159 aa4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 TRAF3IP2O43734 574 aaPredicted RBP4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 CRLF1O75462 422 aa4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 GNB3P16520 340 aa4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 ZNF708P17019 499 aa4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 PPIBP23284 216 aaKnown RBP4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 PRTN3P24158 256 aa4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 BLVRBP30043 206 aaPredicted RBP4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 GDF5P43026 501 aa4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 P2RX1P51575 399 aa4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 RND2P52198 227 aa4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 RPL38P63173 70 aaKnown RBP4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 DEFB103AP81534 67 aa4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 TNFAIP6P98066 277 aaPredicted RBP4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 LY6DQ14210 128 aa4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 INSL4Q14641 139 aa4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 DNM1P46Q6ZS02 220 aa4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 TMEM219Q86XT9 240 aa4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 PRR22Q8IZ63 422 aa4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 FGF11Q92914 225 aa4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 SLC25A38Q96DW6 304 aa4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 TMEM101Q96IK0 257 aa4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 TVP23BQ9NYZ1 205 aa4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 LAMA2P24043 3122 aaKnown RBP4.77□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 HELZP42694 1942 aaKnown RBP4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 PLXNB3Q9ULL4 1909 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 TRBV24-1A0A075B6N3 115 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 A0A1B0GV50 99 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 ZNF727A8MUV8 499 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 KBTBD11O94819 623 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 DUS4LO95620 317 aaKnown RBP4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 SEMA4FO95754 770 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 NTF3P20783 257 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 SRIP30626 198 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 G6PCP35575 357 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 GNG4P50150 75 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 SUB1P53999 127 aaKnown RBP eCLIP4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 MEF2CQ06413 473 aaPredicted RBP4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 PMAIP1Q13794 54 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 C22orf39Q6P5X5 142 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 PRSS54Q6PEW0 395 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 GFRALQ6UXV0 394 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 SUMF2Q8NBJ7 301 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 MS4A6EQ96DS6 147 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 SLC25A21Q9BQT8 299 aaPredicted RBP4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 EIF5A2Q9GZV4 153 aaKnown RBP4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 GTSF1LQ9H1H1 148 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 ISG20L2Q9H9L3 353 aaKnown RBP4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 C11orf21Q9P2W6 132 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 NAT8Q9UHE5 227 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 MCTS1Q9ULC4 181 aaKnown RBP4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 NINQ8N4C6 2090 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 IGLV3-16A0A075B6K0 115 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 LINC01553A4QN01 128 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 TLCD2A6NGC4 264 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 LINC01548A6NM66 108 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 LOC730098B7Z3J9 87 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 C9JAW5 83 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 ZNF354AO60765 605 aaPredicted RBP4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 IMPA1P29218 277 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 SPINT3P49223 89 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 FABP6P51161 128 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 CRYBA2P53672 197 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 ZNF266Q14584 549 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 MMDQ15546 238 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 ZNF322Q6U7Q0 402 aaPredicted RBP4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 NEGR1Q7Z3B1 354 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 C1orf158Q8N1D5 194 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 GAPTQ8N292 157 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 KRTCAP2Q8N6L1 136 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 OR2T33Q8NG76 320 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 OR4C16Q8NGL9 310 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 SEC22AQ96IW7 307 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 C8orf49Q96NF6 230 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 POLR2J3Q9H1A7 115 aaKnown RBP4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 TMEM242Q9NWH2 141 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 BET1LQ9NYM9 111 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 KLK11Q9UBX7 282 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 HIGD1AQ9Y241 93 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 PLXND1Q9Y4D7 1925 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 NUP214P35658 2090 aaPredicted RBP4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 MYO7AQ13402 2215 aa4.76□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 hADV38S2A0JD32 116 aa4.75□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 H3BQ15 152 aa4.75□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 CCL16O15467 120 aa4.75□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 FGF17O60258 216 aa4.75□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 RAMP1O60894 148 aa4.75□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 PPP1R3DO95685 299 aa4.75□□□□□ -1.65
ALMS1-IT1-201ENST00000441587 AKAIN1P0CW23 69 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms